Protein : Qrob_P0178930.2 Q. robur
Protein Identifier  ? Qrob_P0178930.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=1) 2.4.1.186 - Glycogenin glucosyltransferase. Code Enzyme  EC:2.4.1.186
Gene Prediction Quality  validated Protein length 

Sequence

Length: 224  
Kegg Orthology  K00750
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0016757 transferase activity, transferring glycosyl groups Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor).
GO:0005794 Golgi apparatus A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions.
GO:0009834 plant-type secondary cell wall biogenesis A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of inextensible cellulose- and pectin-containing cell walls that are formed between the plasma membrane and primary cell wall after cell expansion is complete. An example of this is found in Arabidopsis thaliana.
GO:0015020 glucuronosyltransferase activity Catalysis of the reaction: UDP-glucuronate + acceptor = UDP + acceptor beta-D-glucuronoside.
GO:0045492 xylan biosynthetic process The chemical reactions and pathways resulting in the formation of xylan, a polymer containing a beta-1,4-linked D-xylose backbone.

33 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_1431450 2 223 + 222 Gaps:61 62.61 452 50.88 3e-90 glycogenin putative
blastp_kegg lcl|pop:POPTR_0005s03650g 2 223 + 222 Gaps:23 43.13 568 60.82 4e-76 hypothetical protein
blastp_kegg lcl|pop:POPTR_0013s02380g 2 218 + 217 Gaps:23 48.41 502 62.14 4e-75 POPTRDRAFT_893357 hypothetical protein
blastp_kegg lcl|pvu:PHAVU_006G092200g 10 221 + 212 Gaps:24 43.07 548 58.90 8e-75 hypothetical protein
blastp_kegg lcl|gmx:100809680 9 221 + 213 Gaps:23 43.04 553 58.82 4e-73 putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 4-like
blastp_kegg lcl|cit:102628408 2 223 + 222 Gaps:23 43.33 570 59.51 1e-71 putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 4-like
blastp_kegg lcl|cic:CICLE_v10000664mg 2 223 + 222 Gaps:23 41.86 590 59.51 1e-71 hypothetical protein
blastp_kegg lcl|cit:102626172 2 223 + 222 Gaps:23 43.33 570 58.70 3e-71 putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 4-like
blastp_kegg lcl|cic:CICLE_v10004021mg 2 223 + 222 Gaps:23 43.33 570 58.70 4e-71 hypothetical protein
blastp_kegg lcl|csv:101212783 2 223 + 222 Gaps:29 41.35 607 56.57 8e-70 putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 4-like
blastp_pdb 1zcv_A 53 125 + 73 Gaps:2 21.25 353 48.00 7e-13 mol:protein length:353 Glycogenin-1
blastp_pdb 3u2x_B 50 125 + 76 Gaps:2 29.66 263 46.15 2e-12 mol:protein length:263 Glycogenin-1
blastp_pdb 3u2x_A 50 125 + 76 Gaps:2 29.66 263 46.15 2e-12 mol:protein length:263 Glycogenin-1
blastp_pdb 3u2v_B 50 125 + 76 Gaps:2 29.66 263 46.15 2e-12 mol:protein length:263 Glycogenin-1
blastp_pdb 3u2v_A 50 125 + 76 Gaps:2 29.66 263 46.15 2e-12 mol:protein length:263 Glycogenin-1
blastp_pdb 3u2u_B 50 125 + 76 Gaps:2 29.66 263 46.15 2e-12 mol:protein length:263 Glycogenin-1
blastp_pdb 3u2u_A 50 125 + 76 Gaps:2 29.66 263 46.15 2e-12 mol:protein length:263 Glycogenin-1
blastp_pdb 3t7o_B 50 125 + 76 Gaps:2 29.66 263 46.15 2e-12 mol:protein length:263 Glycogenin-1
blastp_pdb 3t7o_A 50 125 + 76 Gaps:2 29.66 263 46.15 2e-12 mol:protein length:263 Glycogenin-1
blastp_pdb 3t7n_B 50 125 + 76 Gaps:2 29.66 263 46.15 2e-12 mol:protein length:263 Glycogenin-1
blastp_uniprot_sprot sp|Q9FZ37|GUX4_ARATH 8 222 + 215 Gaps:23 43.63 557 53.50 9e-66 Putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 4 OS Arabidopsis thaliana GN GUX4 PE 3 SV 1
blastp_uniprot_sprot sp|F4HZC3|GUX5_ARATH 7 220 + 214 Gaps:25 43.11 566 52.46 9e-60 Putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 5 OS Arabidopsis thaliana GN GUX5 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LSB1|GUX1_ARATH 53 217 + 165 Gaps:32 29.89 659 45.69 1e-48 UDP-glucuronate:xylan alpha-glucuronosyltransferase 1 OS Arabidopsis thaliana GN GUX1 PE 2 SV 1
blastp_uniprot_sprot sp|Q8GWW4|GUX2_ARATH 14 191 + 178 Gaps:16 36.91 596 45.91 6e-47 UDP-glucuronate:xylan alpha-glucuronosyltransferase 2 OS Arabidopsis thaliana GN GUX2 PE 2 SV 1
blastp_uniprot_sprot sp|Q8W4A7|GUX3_ARATH 53 219 + 167 Gaps:33 32.36 618 43.00 1e-43 Putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3 OS Arabidopsis thaliana GN GUX3 PE 2 SV 1
blastp_uniprot_sprot sp|Q9R062|GLYG_MOUSE 50 125 + 76 Gaps:2 23.42 333 46.15 4e-12 Glycogenin-1 OS Mus musculus GN Gyg1 PE 2 SV 3
blastp_uniprot_sprot sp|O08730|GLYG_RAT 53 125 + 73 Gaps:2 22.52 333 46.67 4e-12 Glycogenin-1 OS Rattus norvegicus GN Gyg1 PE 2 SV 4
blastp_uniprot_sprot sp|P13280|GLYG_RABIT 53 125 + 73 Gaps:2 22.52 333 46.67 1e-11 Glycogenin-1 OS Oryctolagus cuniculus GN GYG1 PE 1 SV 3
blastp_uniprot_sprot sp|Q8GWB7|GUX6_ARATH 50 122 + 73 none 13.59 537 45.21 1e-11 Putative glucuronosyltransferase PGSIP6 OS Arabidopsis thaliana GN PGSIP6 PE 2 SV 1
blastp_uniprot_sprot sp|P46976|GLYG_HUMAN 50 125 + 76 Gaps:2 22.29 350 46.15 1e-11 Glycogenin-1 OS Homo sapiens GN GYG1 PE 1 SV 4

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 53 165 113 PF01501 none Glycosyl transferase family 8 IPR002495
PANTHER 53 220 168 PTHR11183:SF44 none none IPR030519
PANTHER 53 220 168 PTHR11183 none none IPR002495
Gene3D 53 191 139 G3DSA:3.90.550.10 none none IPR029044
SUPERFAMILY 53 191 139 SSF53448 none none IPR029044

0 Localization

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

0 Targeting