Protein : Qrob_P0178920.2 Q. robur
Protein Identifier  ? Qrob_P0178920.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=3) 2.4.1.17 - Glucuronosyltransferase. Code Enzyme  EC:2.4.1.17
Gene Prediction Quality  validated Protein length 

Sequence

Length: 545  
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0016757 transferase activity, transferring glycosyl groups Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor).
GO:0005794 Golgi apparatus A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions.
GO:0009834 plant-type secondary cell wall biogenesis A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of inextensible cellulose- and pectin-containing cell walls that are formed between the plasma membrane and primary cell wall after cell expansion is complete. An example of this is found in Arabidopsis thaliana.
GO:0015020 glucuronosyltransferase activity Catalysis of the reaction: UDP-glucuronate + acceptor = UDP + acceptor beta-D-glucuronoside.
GO:0045492 xylan biosynthetic process The chemical reactions and pathways resulting in the formation of xylan, a polymer containing a beta-1,4-linked D-xylose backbone.

38 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v10004021mg 28 544 + 517 Gaps:20 91.75 570 63.86 0.0 hypothetical protein
blastp_kegg lcl|cit:102628408 28 544 + 517 Gaps:20 91.75 570 63.86 0.0 putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 4-like
blastp_kegg lcl|cic:CICLE_v10000664mg 28 544 + 517 Gaps:20 88.64 590 63.86 0.0 hypothetical protein
blastp_kegg lcl|tcc:TCM_026564 1 543 + 543 Gaps:21 99.82 555 61.55 0.0 Plant glycogenin-like starch initiation protein 4 putative
blastp_kegg lcl|cit:102626172 28 544 + 517 Gaps:20 91.75 570 63.29 0.0 putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 4-like
blastp_kegg lcl|gmx:100809680 1 542 + 542 Gaps:24 99.46 553 59.09 0.0 putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 4-like
blastp_kegg lcl|mdm:103451326 13 542 + 530 Gaps:27 95.81 573 59.56 0.0 putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 5
blastp_kegg lcl|vvi:100247620 54 544 + 491 Gaps:22 91.03 546 62.78 0.0 uncharacterized LOC100247620
blastp_kegg lcl|mdm:103408620 12 542 + 531 Gaps:23 96.30 567 59.71 0.0 putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 4
blastp_kegg lcl|fve:101296024 15 541 + 527 Gaps:21 96.07 560 59.85 0.0 putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 4-like
blastp_pdb 3u2x_B 260 424 + 165 Gaps:8 65.02 263 34.50 2e-20 mol:protein length:263 Glycogenin-1
blastp_pdb 3u2x_A 260 424 + 165 Gaps:8 65.02 263 34.50 2e-20 mol:protein length:263 Glycogenin-1
blastp_pdb 3u2v_B 260 424 + 165 Gaps:8 65.02 263 34.50 2e-20 mol:protein length:263 Glycogenin-1
blastp_pdb 3u2v_A 260 424 + 165 Gaps:8 65.02 263 34.50 2e-20 mol:protein length:263 Glycogenin-1
blastp_pdb 3u2u_B 260 424 + 165 Gaps:8 65.02 263 34.50 2e-20 mol:protein length:263 Glycogenin-1
blastp_pdb 3u2u_A 260 424 + 165 Gaps:8 65.02 263 34.50 2e-20 mol:protein length:263 Glycogenin-1
blastp_pdb 3t7o_B 260 424 + 165 Gaps:8 65.02 263 34.50 2e-20 mol:protein length:263 Glycogenin-1
blastp_pdb 3t7o_A 260 424 + 165 Gaps:8 65.02 263 34.50 2e-20 mol:protein length:263 Glycogenin-1
blastp_pdb 3t7n_B 260 424 + 165 Gaps:8 65.02 263 34.50 2e-20 mol:protein length:263 Glycogenin-1
blastp_pdb 3t7n_A 260 424 + 165 Gaps:8 65.02 263 34.50 2e-20 mol:protein length:263 Glycogenin-1
blastp_uniprot_sprot sp|Q9FZ37|GUX4_ARATH 1 543 + 543 Gaps:30 99.64 557 52.79 0.0 Putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 4 OS Arabidopsis thaliana GN GUX4 PE 3 SV 1
blastp_uniprot_sprot sp|F4HZC3|GUX5_ARATH 1 543 + 543 Gaps:35 99.65 566 52.30 0.0 Putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 5 OS Arabidopsis thaliana GN GUX5 PE 2 SV 1
blastp_uniprot_sprot sp|Q8GWW4|GUX2_ARATH 65 541 + 477 Gaps:25 81.21 596 51.24 1e-163 UDP-glucuronate:xylan alpha-glucuronosyltransferase 2 OS Arabidopsis thaliana GN GUX2 PE 2 SV 1
blastp_uniprot_sprot sp|Q8W4A7|GUX3_ARATH 55 538 + 484 Gaps:26 78.32 618 46.49 2e-143 Putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3 OS Arabidopsis thaliana GN GUX3 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LSB1|GUX1_ARATH 68 538 + 471 Gaps:27 71.62 659 47.88 3e-140 UDP-glucuronate:xylan alpha-glucuronosyltransferase 1 OS Arabidopsis thaliana GN GUX1 PE 2 SV 1
blastp_uniprot_sprot sp|Q8GWB7|GUX6_ARATH 255 421 + 167 Gaps:1 30.91 537 37.95 4e-25 Putative glucuronosyltransferase PGSIP6 OS Arabidopsis thaliana GN PGSIP6 PE 2 SV 1
blastp_uniprot_sprot sp|P46976|GLYG_HUMAN 260 508 + 249 Gaps:22 75.71 350 29.81 4e-20 Glycogenin-1 OS Homo sapiens GN GYG1 PE 1 SV 4
blastp_uniprot_sprot sp|O08730|GLYG_RAT 260 508 + 249 Gaps:20 79.58 333 30.19 4e-20 Glycogenin-1 OS Rattus norvegicus GN Gyg1 PE 2 SV 4
blastp_uniprot_sprot sp|Q9R062|GLYG_MOUSE 260 508 + 249 Gaps:20 79.58 333 29.81 8e-20 Glycogenin-1 OS Mus musculus GN Gyg1 PE 2 SV 3
blastp_uniprot_sprot sp|P13280|GLYG_RABIT 260 508 + 249 Gaps:22 79.58 333 28.30 2e-18 Glycogenin-1 OS Oryctolagus cuniculus GN GYG1 PE 1 SV 3

8 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 259 504 246 G3DSA:3.90.550.10 none none IPR029044
PANTHER 193 539 347 PTHR11183:SF44 none none IPR030519
Pfam 263 464 202 PF01501 none Glycosyl transferase family 8 IPR002495
SUPERFAMILY 259 502 244 SSF53448 none none IPR029044
Phobius 32 544 513 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 11 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 12 31 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 193 539 347 PTHR11183 none none IPR002495

1 Localization

Analysis Start End Length
TMHMM 12 31 19

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 29   Secretory pathway 2 0.809 0.124 NON-PLANT 29