Protein : Qrob_P0178910.2 Q. robur
Protein Identifier  ? Qrob_P0178910.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) PTHR15615:SF7 - CYCLIN-U4-2-RELATED (PTHR15615:SF7) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 192  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity Any process that modulates the frequency, rate or extent of cyclin-dependent protein serine/threonine kinase activity.
GO:0019901 protein kinase binding Interacting selectively and non-covalently with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate.

26 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_1431440 8 181 + 174 Gaps:4 78.73 221 67.24 4e-80 cyclin-dependent protein kinase putative
blastp_kegg lcl|tcc:TCM_026567 1 182 + 182 Gaps:4 74.10 251 62.37 3e-79 Cyclin family protein putative isoform 1
blastp_kegg lcl|pop:POPTR_0005s03660g 1 184 + 184 Gaps:2 89.32 206 61.41 3e-76 hypothetical protein
blastp_kegg lcl|sot:102579170 2 181 + 180 none 79.65 226 59.44 2e-75 cyclin-P3-1-like
blastp_kegg lcl|sly:101264373 1 181 + 181 Gaps:5 82.30 226 59.14 2e-75 cyclin-P3-1-like
blastp_kegg lcl|vvi:100254595 1 181 + 181 none 80.09 226 62.98 7e-75 cyclin-P3-1-like
blastp_kegg lcl|pop:POPTR_0005s23140g 1 183 + 183 none 83.56 219 58.47 4e-74 POPTRDRAFT_818654 cyclin family protein
blastp_kegg lcl|pmum:103344642 22 183 + 162 none 82.65 196 64.81 2e-73 cyclin-P3-1
blastp_kegg lcl|pda:103723612 1 182 + 182 none 81.98 222 64.29 3e-72 cyclin-P3-1-like
blastp_kegg lcl|cit:102614452 1 181 + 181 Gaps:1 82.95 217 57.78 4e-72 cyclin-P3-1-like
blastp_pdb 2pmi_D 23 164 + 142 Gaps:9 48.81 293 35.66 1e-11 mol:protein length:293 PHO85 cyclin PHO80
blastp_pdb 2pmi_B 23 164 + 142 Gaps:9 48.81 293 35.66 1e-11 mol:protein length:293 PHO85 cyclin PHO80
blastp_pdb 2pk9_D 23 164 + 142 Gaps:9 48.81 293 35.66 1e-11 mol:protein length:293 PHO85 cyclin PHO80
blastp_pdb 2pk9_B 23 164 + 142 Gaps:9 48.81 293 35.66 1e-11 mol:protein length:293 PHO85 cyclin PHO80
blastp_uniprot_sprot sp|Q75HV0|CCP31_ORYSJ 15 183 + 169 Gaps:2 72.46 236 58.48 2e-65 Cyclin-P3-1 OS Oryza sativa subsp. japonica GN CYCP3-1 PE 3 SV 1
blastp_uniprot_sprot sp|O80513|CCU41_ARATH 30 181 + 152 Gaps:1 75.74 202 52.29 2e-52 Cyclin-U4-1 OS Arabidopsis thaliana GN CYCU4-1 PE 1 SV 1
blastp_uniprot_sprot sp|Q7XC35|CCP41_ORYSJ 27 181 + 155 Gaps:4 75.00 212 47.80 1e-46 Cyclin-P4-1 OS Oryza sativa subsp. japonica GN CYCP4-1 PE 2 SV 1
blastp_uniprot_sprot sp|Q8LB60|CCU31_ARATH 57 182 + 126 none 57.01 221 55.56 7e-46 Cyclin-U3-1 OS Arabidopsis thaliana GN CYCU3-1 PE 1 SV 2
blastp_uniprot_sprot sp|Q9LY16|CCU42_ARATH 29 181 + 153 Gaps:1 71.30 216 44.81 7e-45 Cyclin-U4-2 OS Arabidopsis thaliana GN CYCU4-2 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SHD3|CCU21_ARATH 21 181 + 161 Gaps:1 72.97 222 44.44 3e-44 Cyclin-U2-1 OS Arabidopsis thaliana GN CYCU2-1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9LJ45|CCU11_ARATH 26 181 + 156 Gaps:2 75.24 210 49.37 2e-43 Cyclin-U1-1 OS Arabidopsis thaliana GN CYCU1-1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9M205|CCU22_ARATH 21 181 + 161 Gaps:6 71.74 230 46.06 1e-42 Cyclin-U2-2 OS Arabidopsis thaliana GN CYCU2-2 PE 1 SV 1
blastp_uniprot_sprot sp|Q9FKF6|CCU43_ARATH 29 181 + 153 Gaps:5 68.49 219 46.00 8e-40 Cyclin-U4-3 OS Arabidopsis thaliana GN CYCU4-3 PE 1 SV 1
blastp_uniprot_sprot sp|Q7FAT5|CCP21_ORYSJ 28 181 + 154 Gaps:3 72.35 217 38.22 7e-32 Cyclin-P2-1 OS Oryza sativa subsp. japonica GN CYCP2-1 PE 2 SV 1
rpsblast_cdd gnl|CDD|204002 29 164 + 136 Gaps:4 100.00 140 39.29 7e-31 pfam08613 Cyclin Cyclin. This family includes many different cyclin proteins. Members include the G1/S-specific cyclin pas1 and the phosphate system cyclin PHO80/PHO85.
rpsblast_kog gnl|CDD|36887 16 181 + 166 Gaps:10 80.73 218 43.75 1e-35 KOG1674 KOG1674 KOG1674 Cyclin [General function prediction only].

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 34 164 131 PF08613 none Cyclin IPR013922
PIRSF 12 189 178 PIRSF027110 none none IPR012389
SUPERFAMILY 76 164 89 SSF47954 none none IPR013763
Gene3D 81 164 84 G3DSA:1.10.472.10 none none IPR013763
PANTHER 29 181 153 PTHR15615 none none none
PANTHER 29 181 153 PTHR15615:SF7 none none none

0 Localization

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

0 Targeting