Protein : Qrob_P0178450.2 Q. robur
Protein Identifier  ? Qrob_P0178450.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=25) 3.1.3.2 - Acid phosphatase. Code Enzyme  EC:3.1.3.2
Gene Prediction Quality  validated Protein length 

Sequence

Length: 257  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0003993 acid phosphatase activity Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an acid pH optimum.

26 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_1487980 1 256 + 256 Gaps:6 100.00 258 60.47 2e-111 Stem 28 kDa glycoprotein precursor putative (EC:3.1.3.2)
blastp_kegg lcl|pmum:103327818 1 256 + 256 Gaps:9 98.49 265 61.69 1e-109 acid phosphatase 1-like
blastp_kegg lcl|pop:POPTR_0001s19180g 4 256 + 253 Gaps:7 98.08 261 60.94 2e-109 POPTRDRAFT_705836 hypothetical protein
blastp_kegg lcl|tcc:TCM_028914 1 256 + 256 Gaps:7 100.00 259 60.23 4e-109 Stem 28 kDa glycoprotein putative
blastp_kegg lcl|pper:PRUPE_ppa010152mg 1 256 + 256 Gaps:9 100.00 261 60.15 1e-107 hypothetical protein
blastp_kegg lcl|fve:101300364 1 256 + 256 Gaps:8 98.11 265 58.85 1e-107 stem 28 kDa glycoprotein-like
blastp_kegg lcl|vvi:100853464 13 256 + 244 Gaps:3 94.51 255 63.49 3e-107 acid phosphatase 1-like
blastp_kegg lcl|cit:102626130 6 256 + 251 Gaps:9 96.97 264 61.33 2e-106 acid phosphatase 1-like
blastp_kegg lcl|fve:101300642 19 256 + 238 Gaps:2 90.08 262 61.02 5e-103 stem 28 kDa glycoprotein-like
blastp_kegg lcl|fve:101307036 1 256 + 256 Gaps:11 100.00 263 60.84 5e-102 acid phosphatase 1-like
blastp_pdb 2i34_B 106 253 + 148 Gaps:29 60.85 258 28.03 2e-07 mol:protein length:258 acid phosphatase
blastp_pdb 2i34_A 106 253 + 148 Gaps:29 60.85 258 28.03 2e-07 mol:protein length:258 acid phosphatase
blastp_pdb 2i33_B 106 253 + 148 Gaps:29 60.85 258 28.03 2e-07 mol:protein length:258 Acid phosphatase
blastp_pdb 2i33_A 106 253 + 148 Gaps:29 60.85 258 28.03 2e-07 mol:protein length:258 Acid phosphatase
blastp_uniprot_sprot sp|P27061|PPA1_SOLLC 1 255 + 255 Gaps:11 99.61 255 45.67 2e-78 Acid phosphatase 1 OS Solanum lycopersicum GN APS1 PE 2 SV 1
blastp_uniprot_sprot sp|P15490|VSPA_SOYBN 1 256 + 256 Gaps:8 99.21 254 46.83 2e-67 Stem 28 kDa glycoprotein OS Glycine max GN VSPA PE 2 SV 1
blastp_uniprot_sprot sp|P10742|S25K_SOYBN 7 251 + 245 Gaps:7 83.16 291 46.28 1e-63 Stem 31 kDa glycoprotein (Fragment) OS Glycine max GN VSP25 PE 2 SV 2
blastp_uniprot_sprot sp|P10743|VSPB_SOYBN 26 255 + 230 Gaps:6 88.98 254 47.35 1e-62 Stem 31 kDa glycoprotein OS Glycine max GN VSPB PE 2 SV 1
blastp_uniprot_sprot sp|O49195|VSP1_ARATH 9 255 + 247 Gaps:10 89.26 270 41.91 1e-54 Vegetative storage protein 1 OS Arabidopsis thaliana GN VSP1 PE 1 SV 2
blastp_uniprot_sprot sp|O82122|VSP2_ARATH 41 255 + 215 Gaps:6 80.38 265 42.25 2e-52 Vegetative storage protein 2 OS Arabidopsis thaliana GN VSP2 PE 1 SV 1
blastp_uniprot_sprot sp|O04195|Y2992_ARATH 42 253 + 212 Gaps:29 66.08 283 31.55 1e-11 Uncharacterized protein At2g39920 OS Arabidopsis thaliana GN At2g39920 PE 2 SV 2
rpsblast_cdd gnl|CDD|130736 42 255 + 214 Gaps:2 92.58 229 53.77 1e-77 TIGR01675 plant-AP plant acid phosphatase. This model represents a family of acid phosphatase from plants which are most closely related to the (so called) class B non-specific acid phosphatase OlpA (TIGR01533 which is believed to be a 5'-nucleotide phosphatase) and somewhat more distantly to another class B phosphatase AphA (TIGR01672). Together these three clades define a subfamily (pfam03767) which corresponds to the IIIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate nucleophile hydrolases. It has been reported that the best substrate for this enzyme that could be found was purine 5'-nucleoside phosphates. This is in concordance with the assignment of the H. influenzae hel protein (from TIGR01533) as a 5'-nucleotidase however there is presently no other evidence to support this specific function for these plant phosphatases. Many genes from this family have been annotated as vegetative storage proteins due to their close homology with these earlier-characterized gene products which are highly expressed in leaves. There are significant differences however including expression levels and distribution. The most important difference is the lack in authentic VSPs of the nucleophilic aspartate residue which is instead replaced by serine glycine or asparagine. Thus these proteins can not be expected to be active phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists however that some members of this family may while containing all of the conserved HAD-superfamily catalytic residues lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
rpsblast_cdd gnl|CDD|202762 43 255 + 213 Gaps:3 99.53 213 53.30 2e-72 pfam03767 Acid_phosphat_B HAD superfamily subfamily IIIB (Acid phosphatase). This family proteins includes acid phosphatases and a number of vegetative storage proteins.
rpsblast_cdd gnl|CDD|130741 33 256 + 224 Gaps:7 81.09 275 45.29 2e-54 TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675) are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus thus they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
rpsblast_cdd gnl|CDD|162404 106 235 + 130 Gaps:12 45.86 266 31.97 4e-10 TIGR01533 lipo_e_P4 5'-nucleotidase lipoprotein e(P4) family. This model represents a set of bacterial lipoproteins belonging to a larger acid phosphatase family (pfam03767) which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
rpsblast_cdd gnl|CDD|32577 106 241 + 136 Gaps:14 46.72 274 30.47 8e-08 COG2503 COG2503 Predicted secreted acid phosphatase [General function prediction only].

11 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 1 2 2 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Pfam 36 255 220 PF03767 none HAD superfamily, subfamily IIIB (Acid phosphatase) IPR005519
PANTHER 39 255 217 PTHR31284 none none none
Phobius 14 18 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 1 18 18 SIGNAL_PEPTIDE none Signal peptide region none
Phobius 19 256 238 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SUPERFAMILY 96 239 144 SSF56784 none none IPR023214
Gene3D 105 236 132 G3DSA:3.40.50.1000 none none IPR023214
PIRSF 3 256 254 PIRSF002674 none none IPR014403
Phobius 3 13 11 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
TIGRFAM 38 255 218 TIGR01675 none plant-AP: plant acid phosphatase IPR010028

0 Localization

2 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC_3P Qrob_Chr05 5 s_2GDU0O_517 s_1BT8O3_239 25,81 0 55,45 lod 2,2101 5,5

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 20   Secretory pathway 2 0.805 0.074 NON-PLANT 20