Protein : Qrob_P0178100.2 Q. robur
Protein Identifier  ? Qrob_P0178100.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=8) K01866 - tyrosyl-tRNA synthetase [EC:6.1.1.1] Code Enzyme  EC:6.1.1.1
Gene Prediction Quality  validated Protein length 

Sequence

Length: 209  
Kegg Orthology  K01866
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0000166 nucleotide binding Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
GO:0004812 aminoacyl-tRNA ligase activity Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of diphosphate and AMP.
GO:0006418 tRNA aminoacylation for protein translation The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis.

34 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pvu:PHAVU_002G027700g 1 206 + 206 Gaps:62 70.71 379 49.25 2e-75 hypothetical protein
blastp_kegg lcl|gmx:100812345 1 206 + 206 Gaps:62 70.53 380 48.13 3e-73 tyrosyl-tRNA synthetase-like
blastp_kegg lcl|gmx:100806939 1 206 + 206 Gaps:62 70.34 381 48.51 2e-72 tyrosine--tRNA ligase cytoplasmic-like
blastp_kegg lcl|csv:101218148 1 206 + 206 Gaps:62 69.25 387 48.51 4e-72 tyrosine--tRNA ligase-like
blastp_kegg lcl|cam:101512490 1 206 + 206 Gaps:62 69.79 384 48.51 1e-71 tyrosine--tRNA ligase-like
blastp_kegg lcl|cmo:103482753 1 206 + 206 Gaps:62 69.25 387 48.13 3e-71 tyrosine--tRNA ligase cytoplasmic
blastp_kegg lcl|vvi:100251282 1 206 + 206 Gaps:62 69.61 385 47.01 3e-70 tyrosyl-tRNA synthetase-like
blastp_kegg lcl|sot:102595197 1 206 + 206 Gaps:62 68.19 393 47.01 5e-70 tyrosine--tRNA ligase cytoplasmic-like
blastp_kegg lcl|pmum:103337453 1 207 + 207 Gaps:62 69.87 385 47.21 1e-69 tyrosine--tRNA ligase cytoplasmic-like
blastp_kegg lcl|sly:101247470 1 206 + 206 Gaps:62 68.19 393 46.64 1e-69 tyrosine--tRNA ligase-like
blastp_pdb 2cyb_B 101 188 + 88 Gaps:1 27.55 323 50.56 5e-20 mol:protein length:323 Tyrosyl-tRNA synthetase
blastp_pdb 2cyb_A 101 188 + 88 Gaps:1 27.55 323 50.56 5e-20 mol:protein length:323 Tyrosyl-tRNA synthetase
blastp_pdb 3p0j_D 1 204 + 204 Gaps:86 39.42 690 28.31 3e-19 mol:protein length:690 Tyrosyl-tRNA synthetase
blastp_pdb 3p0j_C 1 204 + 204 Gaps:86 39.42 690 28.31 3e-19 mol:protein length:690 Tyrosyl-tRNA synthetase
blastp_pdb 3p0j_B 1 204 + 204 Gaps:86 39.42 690 28.31 3e-19 mol:protein length:690 Tyrosyl-tRNA synthetase
blastp_pdb 3p0j_A 1 204 + 204 Gaps:86 39.42 690 28.31 3e-19 mol:protein length:690 Tyrosyl-tRNA synthetase
blastp_pdb 3p0i_B 1 204 + 204 Gaps:86 39.42 690 28.31 3e-19 mol:protein length:690 Tyrosyl-tRNA synthetase
blastp_pdb 3p0i_A 1 204 + 204 Gaps:86 39.42 690 28.31 3e-19 mol:protein length:690 Tyrosyl-tRNA synthetase
blastp_pdb 3p0h_B 1 204 + 204 Gaps:86 39.42 690 28.31 3e-19 mol:protein length:690 Tyrosyl-tRNA synthetase
blastp_pdb 3p0h_A 1 204 + 204 Gaps:86 39.42 690 28.31 3e-19 mol:protein length:690 Tyrosyl-tRNA synthetase
blastp_uniprot_sprot sp|O29482|SYY_ARCFU 101 188 + 88 Gaps:1 27.55 323 50.56 2e-19 Tyrosine--tRNA ligase OS Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN tyrS PE 1 SV 1
blastp_uniprot_sprot sp|Q5UPJ7|SYY_MIMIV 1 204 + 204 Gaps:76 73.41 346 28.74 3e-18 Tyrosine--tRNA ligase OS Acanthamoeba polyphaga mimivirus GN YARS PE 1 SV 1
blastp_uniprot_sprot sp|Q5V4J1|SYY_HALMA 101 188 + 88 Gaps:5 26.88 346 40.86 2e-15 Tyrosine--tRNA ligase OS Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) GN tyrS PE 3 SV 1
blastp_uniprot_sprot sp|C3MYZ9|SYY_SULIM 98 201 + 104 Gaps:1 29.09 361 34.29 7e-15 Tyrosine--tRNA ligase OS Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN tyrS PE 3 SV 1
blastp_uniprot_sprot sp|C4KJ87|SYY_SULIK 98 201 + 104 Gaps:1 29.09 361 34.29 7e-15 Tyrosine--tRNA ligase OS Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN tyrS PE 3 SV 1
blastp_uniprot_sprot sp|C3N8R2|SYY_SULIY 98 201 + 104 Gaps:1 29.09 361 34.29 7e-15 Tyrosine--tRNA ligase OS Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN tyrS PE 3 SV 1
blastp_uniprot_sprot sp|C3MJP1|SYY_SULIL 98 201 + 104 Gaps:1 29.09 361 34.29 7e-15 Tyrosine--tRNA ligase OS Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN tyrS PE 3 SV 1
blastp_uniprot_sprot sp|C3N048|SYY_SULIA 98 201 + 104 Gaps:1 29.09 361 34.29 7e-15 Tyrosine--tRNA ligase OS Sulfolobus islandicus (strain M.16.27) GN tyrS PE 3 SV 1
blastp_uniprot_sprot sp|C3NMQ6|SYY_SULIN 98 201 + 104 Gaps:1 29.09 361 34.29 8e-15 Tyrosine--tRNA ligase OS Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN tyrS PE 3 SV 1
blastp_uniprot_sprot sp|P95982|SYY_SULSO 98 201 + 104 Gaps:1 28.69 366 34.29 2e-14 Tyrosine--tRNA ligase OS Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN tyrS PE 3 SV 1

4 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 99 202 104 G3DSA:1.10.240.10 none none none
SUPERFAMILY 7 193 187 SSF52374 none none none
Pfam 99 182 84 PF00579 "Reactome:REACT_71" tRNA synthetases class I (W and Y) IPR002305
Gene3D 1 77 77 G3DSA:3.40.50.620 none none IPR014729

0 Localization

19 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2002_QTL7_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 29 52 lod 8,1 16
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nP_A4 Qrob_Chr02 2 s_1A0FUE_1868 s_1A1UAI_500 20,64 20,47 21,36 lod 5.8 10.9
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL6_d13Cf Qrob_Chr02 2 s_1AEP21_172 v_6048_204 46.33 22,5 65,23 lod 4.972 0.03
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nEpis_A4 Qrob_Chr02 2 s_1BAGIZ_823 s_1BN4CB_644 23,06 23,06 23,06 lod 4.9 11
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7

0 Targeting