Protein : Qrob_P0177350.2 Q. robur
Protein Identifier  ? Qrob_P0177350.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=8) PTHR10857//PTHR10857:SF24 - COPINE // SUBFAMILY NOT NAMED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 171  
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0005544 calcium-dependent phospholipid binding Interacting selectively and non-covalently with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium.
GO:0060548 negative regulation of cell death Any process that decreases the rate or frequency of cell death. Cell death is the specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death.

15 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa018159mg 1 101 + 101 Gaps:5 17.02 564 73.96 9e-41 hypothetical protein
blastp_kegg lcl|cit:102609942 1 101 + 101 Gaps:22 28.28 435 63.41 2e-39 protein BONZAI 3-like
blastp_kegg lcl|eus:EUTSA_v10007173mg 1 101 + 101 Gaps:19 20.55 584 63.33 2e-38 hypothetical protein
blastp_kegg lcl|gmx:100818746 1 100 + 100 Gaps:21 20.37 594 61.16 2e-38 protein BONZAI 3-like
blastp_kegg lcl|gmx:100782229 1 100 + 100 Gaps:17 19.80 591 62.39 6e-38 protein BONZAI 3-like
blastp_kegg lcl|cit:102611564 1 125 + 125 Gaps:30 98.73 157 50.32 8e-38 protein BONZAI 3-like
blastp_kegg lcl|tcc:TCM_025928 1 101 + 101 Gaps:17 19.28 612 61.02 2e-37 Calcium-dependent phospholipid-binding Copine family protein
blastp_kegg lcl|ath:AT1G08860 1 101 + 101 Gaps:20 20.72 584 60.33 3e-37 BON3 protein BONZAI 3
blastp_kegg lcl|pmum:103344705 1 101 + 101 Gaps:21 19.31 580 62.50 1e-36 protein BONZAI 3
blastp_kegg lcl|mdm:103423573 1 101 + 101 Gaps:19 20.34 590 59.17 1e-36 protein BONZAI 3-like
blastp_uniprot_sprot sp|Q5XQC7|BON3_ARATH 1 101 + 101 Gaps:20 20.72 584 60.33 1e-38 Protein BONZAI 3 OS Arabidopsis thaliana GN BON3 PE 1 SV 1
blastp_uniprot_sprot sp|Q941L3|BON1_ARATH 1 101 + 101 Gaps:16 20.24 578 46.15 4e-20 Protein BONZAI 1 OS Arabidopsis thaliana GN BON1 PE 1 SV 2
blastp_uniprot_sprot sp|Q5S1W2|BON2_ARATH 1 101 + 101 Gaps:21 19.80 586 49.14 5e-20 Protein BONZAI 2 OS Arabidopsis thaliana GN BON2 PE 1 SV 2
rpsblast_cdd gnl|CDD|176013 34 100 + 67 Gaps:1 56.67 120 41.18 3e-13 cd04048 C2A_Copine C2 domain first repeat in Copine. There are 2 copies of the C2 domain present in copine a protein involved in membrane trafficking protein-protein interactions and perhaps even cell division and growth. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids inositol polyphosphates and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain such as protein kinase C or membrane trafficking proteins which contain at least two C2 domains such as synaptotagmin 1. However there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues primarily aspartates that serve as ligands for calcium ions. This cd contains the first C2 repeat C2A and has a type-I topology.
rpsblast_kog gnl|CDD|36541 61 101 + 41 none 7.75 529 46.34 3e-07 KOG1327 KOG1327 KOG1327 Copine [Signal transduction mechanisms].

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 41 97 57 SSF49562 none none IPR000008
PANTHER 1 101 101 PTHR10857 none none none
PANTHER 1 101 101 PTHR10857:SF24 none none IPR031116
Pfam 39 98 60 PF00168 none C2 domain IPR000008
Gene3D 39 92 54 G3DSA:2.60.40.150 none none IPR000008

0 Localization

4 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran2_2015_nSecLBD_3P Qrob_Chr12 12 s_A4YYC_633 s_2F1IZB_703 18,64 18,01 21,53 lod 6.5 17.2
Bourran2_2014_nSeqBC_3P Qrob_Chr12 12 s_1EO8V5_710 s_1A2VMU_355 11,04 0 32,58 lod 1,7196 4,7

0 Targeting