Protein : Qrob_P0177110.2 Q. robur
Protein Identifier  ? Qrob_P0177110.2 Organism . Name  Quercus robur
Score  89.0 Score Type  egn
Protein Description  (M=2) K04683 - transcription factor Dp-1 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 346  
Kegg Orthology  K04683
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0003700 sequence-specific DNA binding transcription factor activity Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO:0006355 regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO:0007049 cell cycle The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division.
GO:0005667 transcription factor complex A protein complex that is capable of associating with DNA by direct binding, or via other DNA-binding proteins or complexes, and regulating transcription.

25 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|csv:101216863 1 345 + 345 Gaps:2 100.00 347 86.74 0.0 transcription factor-like protein DPB-like
blastp_kegg lcl|cmo:103495774 1 345 + 345 Gaps:3 100.00 348 86.49 0.0 transcription factor-like protein DPB
blastp_kegg lcl|pmum:103333502 1 345 + 345 Gaps:6 99.12 342 88.50 0.0 transcription factor-like protein DPB
blastp_kegg lcl|csv:101230849 1 345 + 345 Gaps:3 100.00 348 86.49 0.0 transcription factor-like protein DPB-like
blastp_kegg lcl|pper:PRUPE_ppa005481mg 1 345 + 345 Gaps:6 73.86 459 88.50 0.0 hypothetical protein
blastp_kegg lcl|vvi:100267128 22 345 + 324 Gaps:2 92.26 349 90.37 0.0 transcription factor-like protein DPB
blastp_kegg lcl|cam:101490510 1 345 + 345 Gaps:3 100.00 342 83.92 0.0 transcription factor-like protein DPB-like
blastp_kegg lcl|cam:101490189 1 345 + 345 Gaps:4 100.00 343 83.97 0.0 transcription factor-like protein DPB-like
blastp_kegg lcl|gmx:100781272 1 345 + 345 Gaps:7 100.00 338 86.09 0.0 transcription factor-like protein DPB-like
blastp_kegg lcl|pxb:103943296 1 345 + 345 Gaps:14 99.13 346 84.55 0.0 transcription factor-like protein DPB
blastp_pdb 1cf7_B 85 179 + 95 Gaps:2 97.89 95 68.82 1e-38 mol:protein length:95 PROTEIN (TRANSCRIPTION FACTOR DP-2)
blastp_pdb 2aze_A 182 282 + 101 Gaps:4 66.45 155 39.81 8e-12 mol:protein length:155 Transcription factor Dp-1
blastp_uniprot_sprot sp|Q9FNY2|DPB_ARATH 22 345 + 324 Gaps:34 92.99 385 70.95 2e-168 Transcription factor-like protein DPB OS Arabidopsis thaliana GN DPB PE 1 SV 1
blastp_uniprot_sprot sp|Q9FNY3|DPA_ARATH 92 283 + 192 Gaps:1 66.10 292 56.48 2e-75 Transcription factor-like protein DPA OS Arabidopsis thaliana GN DPA PE 1 SV 1
blastp_uniprot_sprot sp|Q14186|TFDP1_HUMAN 83 282 + 200 Gaps:5 49.02 410 53.23 5e-59 Transcription factor Dp-1 OS Homo sapiens GN TFDP1 PE 1 SV 1
blastp_uniprot_sprot sp|Q08639|TFDP1_MOUSE 83 282 + 200 Gaps:5 49.02 410 52.24 3e-58 Transcription factor Dp-1 OS Mus musculus GN Tfdp1 PE 1 SV 1
blastp_uniprot_sprot sp|Q17QZ4|TFDP1_BOVIN 83 282 + 200 Gaps:5 49.02 410 52.24 5e-58 Transcription factor Dp-1 OS Bos taurus GN TFDP1 PE 2 SV 1
blastp_uniprot_sprot sp|Q14188|TFDP2_HUMAN 84 282 + 199 Gaps:6 44.62 446 51.26 1e-52 Transcription factor Dp-2 OS Homo sapiens GN TFDP2 PE 1 SV 2
blastp_uniprot_sprot sp|Q24318|TFDP_DROME 84 284 + 201 Gaps:8 44.27 445 50.25 4e-50 Transcription factor Dp OS Drosophila melanogaster GN Dp PE 1 SV 2
blastp_uniprot_sprot sp|Q5H9I0|TFDP3_HUMAN 83 282 + 200 Gaps:5 49.63 405 44.28 2e-43 Transcription factor Dp family member 3 OS Homo sapiens GN TFDP3 PE 1 SV 1
blastp_uniprot_sprot sp|Q22703|TFDP1_CAEEL 95 285 + 191 Gaps:6 32.27 598 45.08 5e-42 Transcription factor dpl-1 OS Caenorhabditis elegans GN dpl-1 PE 1 SV 2
blastp_uniprot_sprot sp|Q64163|TFDP2_MOUSE 84 282 + 199 Gaps:6 44.62 446 46.23 1e-41 Transcription factor Dp-2 OS Mus musculus GN Tfdp2 PE 1 SV 2
rpsblast_cdd gnl|CDD|192151 181 342 + 162 Gaps:21 100.00 141 43.97 4e-46 pfam08781 DP Transcription factor DP. DP forms a heterodimer with E2F and regulates genes involved in cell cycle progression. The transcriptional activity of E2F is inhibited by the retinoblastoma protein which binds to the E2F-DP heterodimer and negatively regulates the G1-S transition.
rpsblast_cdd gnl|CDD|202203 91 174 + 84 Gaps:25 100.00 67 41.79 3e-16 pfam02319 E2F_TDP E2F/DP family winged-helix DNA-binding domain. This family contains the transcription factor E2F and its dimerisation partners TDP1 and TDP2 which stimulate E2F-dependent transcription. E2F binds to DNA as a homodimer or as a heterodimer in association with TDP1/2 the heterodimer having increased binding efficiency. The crystal structure of an E2F4-DP2-DNA complex shows that the DNA-binding domains of the E2F and DP proteins both have a fold related to the winged-helix DNA-binding motif. Recognition of the central c/gGCGCg/c sequence of the consensus DNA-binding site is symmetric and amino acids that contact these bases are conserved among all known E2F and DP proteins.
rpsblast_kog gnl|CDD|38040 36 289 + 254 Gaps:20 72.39 326 54.66 8e-76 KOG2829 KOG2829 KOG2829 E2F-like protein [Transcription].

8 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PIRSF 3 345 343 PIRSF009404 none none IPR015648
Gene3D 87 179 93 G3DSA:1.10.10.10 none none IPR011991
SUPERFAMILY 180 291 112 SSF144074 none none none
SUPERFAMILY 94 175 82 SSF46785 none none none
PANTHER 46 284 239 PTHR12548 none none IPR015648
Coils 190 225 36 Coil none none none
Pfam 181 318 138 PF08781 none Transcription factor DP IPR014889
Pfam 92 174 83 PF02319 none E2F/DP family winged-helix DNA-binding domain IPR003316

0 Localization

8 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran_2000_2002_QTL7_Delta.F Qrob_Chr09 9 v_5944_442 s_1BA1PC_866 23.51 10,96 35,74 lod 4.1466 0.041
Bourran2_2003_QTL11_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 4,16 48,16 lod 2,3 5,1
Bourran2_2004_QTL12_peak_Bud_burst_3P Qrob_Chr09 9 s_1BDO6G_250 s_1A83AM_496 34,31 9,31 44,31 lod 3,6 7,6
Bourran2_2004_QTL14_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,83 10,33 22,33 lod 3,8 9
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
PM_1999_QTL15_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 9,16 47,16 lod 3,6 6,5
Bourran1_2003_QTL5_peak_Bud_burst_3P Qrob_Chr09 9 s_1ATM17_504 s_1AYZFM_899 29,81 19,81 41,81 lod 3,3 8,9

0 Targeting