Protein : Qrob_P0168220.2 Q. robur
Protein Identifier  ? Qrob_P0168220.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR32060:SF5 - PEPTIDASE S41 FAMILY PROTEIN (PTHR32060:SF5) Code Enzyme  EC:3.4.21.102
Gene Prediction Quality  validated Protein length 

Sequence

Length: 509  
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0006508 proteolysis The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO:0008236 serine-type peptidase activity Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).

34 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0006s05430g 3 508 + 506 Gaps:32 100.00 518 79.54 0.0 POPTRDRAFT_652765 hypothetical protein
blastp_kegg lcl|vvi:100260662 23 508 + 486 Gaps:32 98.85 520 77.04 0.0 carboxyl-terminal-processing protease-like
blastp_kegg lcl|pper:PRUPE_ppa004244mg 3 508 + 506 Gaps:21 100.00 521 76.78 0.0 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10004757mg 23 508 + 486 Gaps:19 98.44 513 78.02 0.0 hypothetical protein
blastp_kegg lcl|cit:102624481 23 508 + 486 Gaps:19 98.44 513 78.02 0.0 C-terminal processing peptidase chloroplastic-like
blastp_kegg lcl|cmo:103486149 3 508 + 506 Gaps:17 100.00 511 76.91 0.0 C-terminal processing peptidase chloroplastic
blastp_kegg lcl|csv:101232088 3 508 + 506 Gaps:17 100.00 511 76.91 0.0 carboxyl-terminal-processing protease-like
blastp_kegg lcl|csv:101223127 3 508 + 506 Gaps:17 100.00 511 76.91 0.0 carboxyl-terminal-processing protease-like
blastp_kegg lcl|tcc:TCM_024797 29 508 + 480 Gaps:31 97.29 517 76.54 0.0 Peptidase S41 family protein isoform 1
blastp_kegg lcl|fve:101290779 10 508 + 499 Gaps:21 100.00 506 77.27 0.0 carboxyl-terminal-processing protease-like
blastp_pdb 1fc6_A 116 468 + 353 Gaps:21 94.33 388 36.61 3e-68 mol:protein length:388 PHOTOSYSTEM II D1 PROTEASE
blastp_pdb 1fcf_A 116 468 + 353 Gaps:21 94.33 388 36.34 9e-68 mol:protein length:388 PHOTOSYSTEM II D1 PROTEASE
blastp_pdb 1fc9_A 116 468 + 353 Gaps:21 94.33 388 36.34 9e-68 mol:protein length:388 PHOTOSYSTEM II D1 PROTEASE
blastp_pdb 1fc7_A 116 468 + 353 Gaps:21 94.33 388 36.34 9e-68 mol:protein length:388 PHOTOSYSTEM II D1 PROTEASE
blastp_uniprot_sprot sp|P42784|CTPA_SYNP2 109 460 + 352 Gaps:17 84.78 414 44.44 6e-94 Carboxyl-terminal-processing protease OS Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN ctpA PE 3 SV 2
blastp_uniprot_sprot sp|Q55669|CTPA_SYNY3 120 460 + 341 Gaps:16 79.86 427 44.57 1e-92 Carboxyl-terminal-processing protease OS Synechocystis sp. (strain PCC 6803 / Kazusa) GN ctpA PE 3 SV 1
blastp_uniprot_sprot sp|O04073|CTPA_ACUOB 113 468 + 356 Gaps:21 79.53 464 37.13 8e-68 C-terminal processing peptidase chloroplastic OS Acutodesmus obliquus GN ctpA PE 1 SV 1
blastp_uniprot_sprot sp|O35002|CTPB_BACSU 168 461 + 294 Gaps:16 61.25 480 32.99 3e-45 Carboxy-terminal processing protease CtpB OS Bacillus subtilis (strain 168) GN ctpB PE 1 SV 1
blastp_uniprot_sprot sp|Q44879|CTPA_BARBK 166 461 + 296 Gaps:24 68.20 434 33.11 5e-43 Carboxy-terminal-processing protease OS Bartonella bacilliformis (strain ATCC 35685 / KC583) GN ctpA PE 3 SV 1
blastp_uniprot_sprot sp|Q6GGY8|CTPAL_STAAR 168 465 + 298 Gaps:20 59.27 496 33.67 6e-43 Probable CtpA-like serine protease OS Staphylococcus aureus (strain MRSA252) GN SAR1432 PE 3 SV 1
blastp_uniprot_sprot sp|Q49XN1|CTPAL_STAS1 168 460 + 293 Gaps:20 58.86 491 33.91 8e-43 Probable CtpA-like serine protease OS Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN SSP1319 PE 3 SV 1
blastp_uniprot_sprot sp|Q5HG01|CTPAL_STAAC 168 465 + 298 Gaps:20 59.27 496 33.67 8e-43 Probable CtpA-like serine protease OS Staphylococcus aureus (strain COL) GN SACOL1455 PE 3 SV 1
blastp_uniprot_sprot sp|Q8NWR2|CTPAL_STAAW 168 465 + 298 Gaps:20 59.27 496 33.67 8e-43 Probable CtpA-like serine protease OS Staphylococcus aureus (strain MW2) GN MW1310 PE 3 SV 1
blastp_uniprot_sprot sp|Q6G9E1|CTPAL_STAAS 168 465 + 298 Gaps:20 59.27 496 33.67 8e-43 Probable CtpA-like serine protease OS Staphylococcus aureus (strain MSSA476) GN SAS1363 PE 3 SV 1
rpsblast_cdd gnl|CDD|177681 125 460 + 336 Gaps:13 88.69 389 41.74 3e-81 PLN00049 PLN00049 carboxyl-terminal processing protease Provisional.
rpsblast_cdd gnl|CDD|161775 157 488 + 332 Gaps:23 97.90 334 39.45 3e-77 TIGR00225 prc C-terminal peptidase (prc). A C-terminal peptidase with different substrates in different species including processing of D1 protein of the photosystem II reaction center in higher plants and cleavage of a peptide of 11 residues from the precursor form of penicillin-binding protein in E.coli E.coli and H influenza have the most distal branch of the tree and their proteins have an N-terminal 200 amino acids that show no homology to other proteins in the database.
rpsblast_cdd gnl|CDD|31136 134 461 + 328 Gaps:21 79.56 406 39.32 5e-75 COG0793 Prc Periplasmic protease [Cell envelope biogenesis outer membrane].
rpsblast_cdd gnl|CDD|143476 298 462 + 165 Gaps:2 77.25 211 48.47 6e-62 cd07560 Peptidase_S41_CPP C-terminal processing peptidase serine protease family S41. The C-terminal processing peptidase (CPP EC 3.4.21.102) also known as tail-specific protease (tsp) the photosystem II D1 C-terminal processing protease (D1P) and other related S41 protease family members are present in this CD. CPP is synthesized as a precursor form with a carboxyl-terminal extension. It specifically recognizes a C-terminal tripeptide Xaa-Yaa-Zaa in which Xaa is preferably Ala or Leu Yaa is preferably Ala or Tyr and Zaa is preferably Ala but then cleaves at a variable distance from the C-terminus. The C-terminal carboxylate group is essential and proteins where this group is amidated are not substrates. This family of proteases contains the PDZ domain that promotes protein-protein interactions and is important for substrate recognition. The active site consists of a serine/lysine catalytic dyad. The bacterial CCP-1 is believed to be important for the degradation of incorrectly synthesized proteins as well as protection from thermal and osmotic stresses. In E. coli it is involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3 (PBP3). In the plant chloroplast the enzyme removes the C-terminal extension of the D1 polypeptide of photosystem II allowing the light-driven assembly of the tetranuclear manganese cluster which is responsible for photosynthetic water oxidation.
rpsblast_cdd gnl|CDD|188415 162 462 + 301 Gaps:26 30.94 973 35.55 3e-53 TIGR03900 prc_long_Delta putative carboxyl-terminal-processing protease deltaproteobacterial. This model describes a multidomain protein of about 1070 residues restricted to the order Myxococcales in the Deltaproteobacteria. Members contain a PDZ domain (pfam00595) an S41 family peptidase domain (pfam03572) and an SH3 domain (pfam06347). A core region of this family including PDZ and S41 regions is described by TIGR00225 C-terminal processing peptidase which recognizes the Prc protease. The species distribution of this family approximates that of largely Deltaproteobacterial C-terminal putative protein-sorting domain TIGR03901 analogous to LPXTG and PEP-CTERM but the co-occurrence may reflect shared restriction to the Myxococcales rather than a substrate/target relationship.
rpsblast_cdd gnl|CDD|197601 268 463 + 196 Gaps:6 98.96 192 41.58 2e-49 smart00245 TSPc tail specific protease. tail specific protease.

14 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SMART 267 464 198 SM00245 none tail specific protease IPR005151
Gene3D 207 272 66 G3DSA:2.30.42.10 none none IPR001478
ProSiteProfiles 188 264 77 PS50106 none PDZ domain profile. IPR001478
SUPERFAMILY 120 220 101 SSF52096 none none IPR029045
SUPERFAMILY 291 467 177 SSF52096 none none IPR029045
Gene3D 273 476 204 G3DSA:3.90.226.10 none none IPR029045
Pfam 199 269 71 PF00595 none PDZ domain (Also known as DHR or GLGF) IPR001478
PANTHER 96 466 371 PTHR32060:SF5 none none none
PANTHER 96 466 371 PTHR32060 none none none
SUPERFAMILY 171 288 118 SSF50156 none none IPR001478
SMART 200 273 74 SM00228 none Domain present in PSD-95, Dlg, and ZO-1/2. IPR001478
TIGRFAM 160 467 308 TIGR00225 none prc: C-terminal processing peptidase IPR004447
Gene3D 117 206 90 G3DSA:3.30.750.44 none none none
Pfam 300 462 163 PF03572 none Peptidase family S41 IPR005151

0 Localization

12 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Bourran2_2014_nEpiBC_A4 Qrob_Chr07 7 s_2FI9D9_500 s_1AXDMJ_325 12,26 0 34,9 lod 2,2306 6,1
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9
Bourran2_2002_QTL10_peak_Bud_burst_3P Qrob_Chr07 7 s_1CAWP_311 s_1BEZ9M_461 7,5 0 21,5 lod 3,7 6,3
Bourran2_2014_nPriBD*_A4 Qrob_Chr07 7 s_1A7UI0_596 s_1A3H6S_352 8,02 0 20,53 lod 4,1062 10,8

0 Targeting