Protein : Qrob_P0166720.2 Q. robur
Protein Identifier  ? Qrob_P0166720.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=1) PTHR11638:SF18 - CHAPERONE CLPB Gene Prediction Quality  validated
Protein length 

Sequence

Length: 805  
Kegg Orthology  K03695
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0019538 protein metabolic process The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification.

42 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_014230 24 804 + 781 Gaps:67 93.08 911 79.72 0.0 Heat shock protein 101
blastp_kegg lcl|cic:CICLE_v10018766mg 24 804 + 781 Gaps:67 93.08 911 79.25 0.0 hypothetical protein
blastp_kegg lcl|cit:102620452 24 804 + 781 Gaps:67 93.08 911 79.01 0.0 chaperone protein ClpB1-like
blastp_kegg lcl|vvi:100232966 24 804 + 781 Gaps:67 93.08 911 79.13 0.0 HSP101 heat shock protein 101
blastp_kegg lcl|fve:101315050 24 800 + 777 Gaps:67 92.54 912 78.79 0.0 chaperone protein ClpB1-like
blastp_kegg lcl|gmx:732632 24 798 + 775 Gaps:67 92.43 911 78.74 0.0 SB100 heat shock protein
blastp_kegg lcl|csv:101229216 24 804 + 781 Gaps:66 93.28 908 77.80 0.0 chaperone protein ClpB1-like
blastp_kegg lcl|csv:101221981 24 804 + 781 Gaps:66 93.28 908 77.80 0.0 chaperone protein ClpB1-like
blastp_kegg lcl|brp:103831900 24 804 + 781 Gaps:67 93.08 911 77.71 0.0 chaperone protein ClpB1
blastp_kegg lcl|cmo:103490763 24 804 + 781 Gaps:66 93.28 908 77.69 0.0 chaperone protein ClpB1
blastp_pdb 1qvr_C 81 774 + 694 Gaps:37 84.43 854 54.51 0.0 mol:protein length:854 ClpB protein
blastp_pdb 1qvr_B 81 774 + 694 Gaps:37 84.43 854 54.51 0.0 mol:protein length:854 ClpB protein
blastp_pdb 1qvr_A 81 774 + 694 Gaps:37 84.43 854 54.51 0.0 mol:protein length:854 ClpB protein
blastp_pdb 3pxi_C 38 762 + 725 Gaps:139 87.07 758 47.58 2e-173 mol:protein length:758 Negative regulator of genetic competence ClpC
blastp_pdb 3pxi_B 38 762 + 725 Gaps:139 87.07 758 47.58 2e-173 mol:protein length:758 Negative regulator of genetic competence ClpC
blastp_pdb 3pxi_A 38 762 + 725 Gaps:139 87.07 758 47.58 2e-173 mol:protein length:758 Negative regulator of genetic competence ClpC
blastp_pdb 3pxg_F 38 409 + 372 Gaps:36 76.50 468 46.65 5e-87 mol:protein length:468 Negative regulator of genetic competence ClpC
blastp_pdb 3pxg_E 38 409 + 372 Gaps:36 76.50 468 46.65 5e-87 mol:protein length:468 Negative regulator of genetic competence ClpC
blastp_pdb 3pxg_D 38 409 + 372 Gaps:36 76.50 468 46.65 5e-87 mol:protein length:468 Negative regulator of genetic competence ClpC
blastp_pdb 3pxg_C 38 409 + 372 Gaps:36 76.50 468 46.65 5e-87 mol:protein length:468 Negative regulator of genetic competence ClpC
blastp_uniprot_sprot sp|P42730|CLPB1_ARATH 24 804 + 781 Gaps:71 92.86 911 77.07 0.0 Chaperone protein ClpB1 OS Arabidopsis thaliana GN CLPB1 PE 1 SV 2
blastp_uniprot_sprot sp|Q6F2Y7|CLPB1_ORYSJ 24 804 + 781 Gaps:70 93.31 912 75.56 0.0 Chaperone protein ClpB1 OS Oryza sativa subsp. japonica GN CLPB1 PE 2 SV 1
blastp_uniprot_sprot sp|Q6N1H2|CLPB_RHOPA 41 763 + 723 Gaps:46 86.80 879 53.87 0.0 Chaperone protein ClpB OS Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) GN clpB PE 3 SV 1
blastp_uniprot_sprot sp|Q7NFE9|CLPB_GLOVI 52 762 + 711 Gaps:40 85.67 872 53.55 0.0 Chaperone protein ClpB OS Gloeobacter violaceus (strain PCC 7421) GN clpB PE 3 SV 1
blastp_uniprot_sprot sp|P31543|CLP_TRYBB 50 776 + 727 Gaps:37 87.33 868 53.96 0.0 Heat shock protein 100 OS Trypanosoma brucei brucei GN HSP100 PE 3 SV 1
blastp_uniprot_sprot sp|O87444|CLPB_LEPBY 50 764 + 715 Gaps:41 85.91 873 52.93 0.0 Chaperone protein ClpB OS Leptolyngbya boryana GN clpB PE 2 SV 2
blastp_uniprot_sprot sp|Q898C7|CLPB_CLOTE 38 762 + 725 Gaps:50 88.90 865 51.76 0.0 Chaperone protein ClpB OS Clostridium tetani (strain Massachusetts / E88) GN clpB PE 3 SV 1
blastp_uniprot_sprot sp|Q826F2|CLPB2_STRAW 52 763 + 712 Gaps:44 85.32 879 53.87 0.0 Chaperone protein ClpB 2 OS Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680) GN clpB2 PE 3 SV 1
blastp_uniprot_sprot sp|Q8YM56|CLPB2_NOSS1 48 762 + 715 Gaps:54 86.12 872 51.80 0.0 Chaperone protein ClpB 2 OS Nostoc sp. (strain PCC 7120 / UTEX 2576) GN clpB2 PE 3 SV 2
blastp_uniprot_sprot sp|P53533|CLPB1_SYNE7 25 761 + 737 Gaps:61 89.70 874 50.64 0.0 Chaperone protein ClpB 1 OS Synechococcus elongatus (strain PCC 7942) GN clpB1 PE 2 SV 3

24 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SMART 687 771 85 SM01086 none C-terminal, D2-small domain, of ClpB protein IPR019489
Pfam 687 761 75 PF10431 none C-terminal, D2-small domain, of ClpB protein IPR019489
Pfam 148 261 114 PF00004 none ATPase family associated with various cellular activities (AAA) IPR003959
PANTHER 52 791 740 PTHR11638:SF18 none none none
PANTHER 52 791 740 PTHR11638 none none none
Pfam 521 681 161 PF07724 none AAA domain (Cdc48 subfamily) IPR003959
PRINTS 632 646 15 PR00300 none ATP-dependent Clp protease ATP-binding subunit signature IPR001270
PRINTS 599 617 19 PR00300 none ATP-dependent Clp protease ATP-binding subunit signature IPR001270
PRINTS 525 543 19 PR00300 none ATP-dependent Clp protease ATP-binding subunit signature IPR001270
PRINTS 570 588 19 PR00300 none ATP-dependent Clp protease ATP-binding subunit signature IPR001270
SUPERFAMILY 105 489 385 SSF52540 none none IPR027417
Coils 379 400 22 Coil none none none
Gene3D 120 287 168 G3DSA:3.40.50.300 none none IPR027417
SMART 521 688 168 SM00382 none ATPases associated with a variety of cellular activities IPR003593
SMART 143 288 146 SM00382 none ATPases associated with a variety of cellular activities IPR003593
Gene3D 289 371 83 G3DSA:1.10.8.60 none none none
Gene3D 510 698 189 G3DSA:3.40.50.300 none none IPR027417
Gene3D 699 776 78 G3DSA:1.10.8.60 none none none
Coils 357 378 22 Coil none none none
ProSitePatterns 239 251 13 PS00870 none Chaperonins clpA/B signature 1. IPR018368
Pfam 52 90 39 PF02861 none Clp amino terminal domain IPR004176
SUPERFAMILY 496 761 266 SSF52540 none none IPR027417
Coils 407 438 32 Coil none none none
Gene3D 52 92 41 G3DSA:1.10.1780.10 none none IPR023150

0 Localization

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL5_peak_Bud_burst_A4 Qrob_Chr10 10 s_1C8OKQ_688 v_12844_707 25,6 13,9 39,9 lod 2,7 6,1
Bourran2_2002_QTL13_peak_Bud_burst_3P Qrob_Chr10 10 s_1B1AG7_637 s_1A3A1N_709 19,44 0 49,44 lod 3 5,6
Bourran2_2002_QTL15_peak_Bud_burst_A4 Qrob_Chr10 10 v_7579_71 s_1ATZMJ_189 23,94 0 43,64 lod 3,7 5,4
Bourran2_2014_vSeqBC_A4 Qrob_Chr10 10 s_1BAM4E_1326 s_1C0HD0_1012 36,88 7,71 46,03 lod 2,6164 7,3
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
PM_1999_QTL16_peak_Bud_burst_3P Qrob_Chr10 10 s_1B6YNI_505 s_1A1ZO_1322 7,48 0 31,48 lod 4 7,1

0 Targeting