Protein : Qrob_P0165640.2 Q. robur
Protein Identifier  ? Qrob_P0165640.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) KOG0078//KOG0079//KOG0080//KOG0084//KOG0087//KOG0088//KOG0092//KOG0094//KOG0098//KOG0394 - GTP-binding protein SEC4 small G protein superfamily and related Ras family GTP-binding proteins [Signal transduction mechanisms Intracellular trafficking secretion and vesicular transport]. // GTP-binding protein H-ray small G protein superfamily [General function prediction only]. // GTPase Rab18 small G protein superfamily [General function prediction only]. // GTPase Rab1/YPT1 small G protein superfamily and related GTP-binding proteins [Signal transduction mechanisms Intracellular trafficking secretion and vesicular transport]. // GTPase Rab11/YPT3 small G protein superfamily [Intracellular trafficking secretion and vesicular transport]. // GTPase Rab21 small G protein superfamily [General function prediction only]. // GTPase Rab5/YPT51 and related small G protein superfamily GTPases [Intracellular trafficking secretion and vesicular transport]. // GTPase Rab6/YPT6/Ryh1 small G protein superfamily [Intracellular trafficking secretion and vesicular transport]. // GTPase Rab2 small G protein superfamily [Intracellular trafficking secretion and vesicular transport]. // Ras-related GTPase [General function prediction only]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 170  
Kegg Orthology  K07893
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0 Synonyms

9 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0006886 intracellular protein transport The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.
GO:0007165 signal transduction The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.
GO:0005622 intracellular The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO:0005525 GTP binding Interacting selectively and non-covalently with GTP, guanosine triphosphate.
GO:0015031 protein transport The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO:0007264 small GTPase mediated signal transduction Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals.
GO:0003924 GTPase activity Catalysis of the reaction: GTP + H2O = GDP + phosphate.
GO:0006913 nucleocytoplasmic transport The directed movement of molecules between the nucleus and the cytoplasm.

50 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100242004 1 130 + 130 none 62.50 208 99.23 1e-88 ras-related protein RABH1b-like
blastp_kegg lcl|pvu:PHAVU_002G003500g 1 130 + 130 none 62.80 207 99.23 1e-88 hypothetical protein
blastp_kegg lcl|sly:101245584 1 130 + 130 none 62.50 208 99.23 2e-88 ras-related protein RABH1b-like
blastp_kegg lcl|sot:102585175 1 130 + 130 none 62.50 208 99.23 2e-88 ras-related protein RABH1b-like
blastp_kegg lcl|rcu:RCOM_0519920 1 130 + 130 none 62.50 208 99.23 2e-88 protein with unknown function
blastp_kegg lcl|gmx:100794537 1 130 + 130 none 62.80 207 99.23 2e-88 ras-related protein RABH1b-like
blastp_kegg lcl|mtr:MTR_5g013900 1 130 + 130 none 57.52 226 99.23 2e-88 Ras-related protein Rab-6
blastp_kegg lcl|cmo:103503500 1 130 + 130 none 62.50 208 99.23 3e-88 ras-related protein RABH1b
blastp_kegg lcl|csv:101228969 1 130 + 130 none 62.50 208 99.23 3e-88 ras-related protein RABH1b-like
blastp_kegg lcl|csv:101204395 1 130 + 130 none 62.50 208 99.23 3e-88 ras-related protein RABH1b-like
blastp_pdb 2ffq_A 8 130 + 123 none 71.93 171 83.74 2e-72 mol:protein length:171 Ras-related protein Rab-6B
blastp_pdb 2fe4_A 8 130 + 123 none 71.93 171 83.74 2e-72 mol:protein length:171 Ras-related protein Rab-6B
blastp_pdb 2e9s_C 8 130 + 123 none 71.93 171 83.74 2e-72 mol:protein length:171 Ras-related protein Rab-6B
blastp_pdb 2e9s_B 8 130 + 123 none 71.93 171 83.74 2e-72 mol:protein length:171 Ras-related protein Rab-6B
blastp_pdb 2e9s_A 8 130 + 123 none 71.93 171 83.74 2e-72 mol:protein length:171 Ras-related protein Rab-6B
blastp_pdb 2y8e_B 5 130 + 126 none 70.39 179 82.54 2e-72 mol:protein length:179 RAB-PROTEIN 6
blastp_pdb 2y8e_A 5 130 + 126 none 70.39 179 82.54 2e-72 mol:protein length:179 RAB-PROTEIN 6
blastp_pdb 2gil_D 9 130 + 122 none 75.31 162 83.61 9e-72 mol:protein length:162 Ras-related protein Rab-6A
blastp_pdb 2gil_C 9 130 + 122 none 75.31 162 83.61 9e-72 mol:protein length:162 Ras-related protein Rab-6A
blastp_pdb 2gil_B 9 130 + 122 none 75.31 162 83.61 9e-72 mol:protein length:162 Ras-related protein Rab-6A
blastp_uniprot_sprot sp|O80501|RAH1B_ARATH 1 139 + 139 none 66.83 208 91.37 4e-88 Ras-related protein RABH1b OS Arabidopsis thaliana GN RABH1B PE 1 SV 1
blastp_uniprot_sprot sp|Q9LFT9|RAH1E_ARATH 1 130 + 130 none 62.80 207 94.62 4e-84 Ras-related protein RABH1e OS Arabidopsis thaliana GN RABH1E PE 2 SV 1
blastp_uniprot_sprot sp|Q9SID8|RAH1D_ARATH 1 130 + 130 none 62.80 207 92.31 2e-81 Ras-related protein RABH1d OS Arabidopsis thaliana GN RABH1D PE 3 SV 1
blastp_uniprot_sprot sp|Q9SMR4|RAH1C_ARATH 1 130 + 130 Gaps:1 61.21 214 89.31 1e-78 Ras-related protein RABH1c OS Arabidopsis thaliana GN RABH1C PE 1 SV 1
blastp_uniprot_sprot sp|P17608|RYH1_SCHPO 6 130 + 125 none 62.19 201 84.00 2e-74 GTP-binding protein ryh1 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN ryh1 PE 1 SV 1
blastp_uniprot_sprot sp|P34213|RAB6A_CAEEL 5 130 + 126 none 61.46 205 81.75 5e-72 Ras-related protein Rab-6.1 OS Caenorhabditis elegans GN rab-6.1 PE 3 SV 1
blastp_uniprot_sprot sp|O18334|RAB6_DROME 5 130 + 126 none 60.58 208 82.54 1e-71 Ras-related protein Rab6 OS Drosophila melanogaster GN Rab6 PE 1 SV 1
blastp_uniprot_sprot sp|P61294|RAB6B_MOUSE 5 130 + 126 none 60.58 208 82.54 1e-71 Ras-related protein Rab-6B OS Mus musculus GN Rab6b PE 1 SV 1
blastp_uniprot_sprot sp|Q9NRW1|RAB6B_HUMAN 5 130 + 126 none 60.58 208 82.54 1e-71 Ras-related protein Rab-6B OS Homo sapiens GN RAB6B PE 1 SV 1
blastp_uniprot_sprot sp|A6QR46|RAB6B_BOVIN 5 130 + 126 none 60.58 208 82.54 1e-71 Ras-related protein Rab-6B OS Bos taurus GN RAB6B PE 2 SV 1

15 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 2 130 129 PTHR24073 none none none
SMART 7 167 161 SM00173 none Ras subfamily of RAS small GTPases IPR020849
SMART 12 157 146 SM00174 "Reactome:REACT_11044" Rho (Ras homology) subfamily of Ras-like small GTPases IPR003578
TIGRFAM 9 128 120 TIGR00231 none small_GTP: small GTP-binding protein domain IPR005225
PANTHER 2 130 129 PTHR24073:SF318 none none none
SMART 10 158 149 SM00175 none Rab subfamily of small GTPases IPR003579
PRINTS 10 31 22 PR00449 none Transforming protein P21 ras signature IPR001806
PRINTS 113 126 14 PR00449 none Transforming protein P21 ras signature IPR001806
PRINTS 51 73 23 PR00449 none Transforming protein P21 ras signature IPR001806
PRINTS 33 49 17 PR00449 none Transforming protein P21 ras signature IPR001806
Pfam 11 152 142 PF00071 none Ras family IPR001806
SUPERFAMILY 9 134 126 SSF52540 none none IPR027417
SMART 15 169 155 SM00176 none Ran (Ras-related nuclear proteins) /TC4 subfamily of small GTPases IPR002041
ProSiteProfiles 5 169 165 PS51419 none small GTPase Rab1 family profile. none
Gene3D 8 137 130 G3DSA:3.40.50.300 none none IPR027417

0 Localization

2 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC_3P Qrob_Chr05 5 s_2GDU0O_517 s_1BT8O3_239 25,81 0 55,45 lod 2,2101 5,5

0 Targeting