Protein : Qrob_P0160880.2 Q. robur
Protein Identifier  ? Qrob_P0160880.2 Organism . Name  Quercus robur
Score  35.1 Score Type  egn
Protein Description  (M=1) KOG0190//KOG0191//KOG0907//KOG0910//KOG0912//KOG1731//KOG4277 - Protein disulfide isomerase (prolyl 4-hydroxylase beta subunit) [Posttranslational modification protein turnover chaperones]. // Thioredoxin/protein disulfide isomerase [Posttranslational modification protein turnover chaperones]. // Thioredoxin [Posttranslational modification protein turnover chaperones]. // Thioredoxin-like protein [Posttranslational modification protein turnover chaperones]. // Thiol-disulfide isomerase and thioredoxin [Posttranslational modification protein turnover chaperones Energy production and conversion]. // FAD-dependent sulfhydryl oxidase/quiescin and related proteins [Cell cycle control cell division chromosome partitioning]. // Uncharacterized conserved protein contains thioredoxin domain [General function prediction only]. Code Enzyme  EC:5.3.4.1
Gene Prediction Quality  validated Protein length 

Sequence

Length: 436  
Kegg Orthology  K09580
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0045454 cell redox homeostasis Any process that maintains the redox environment of a cell or compartment within a cell.
GO:0005783 endoplasmic reticulum The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).
GO:0016853 isomerase activity Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5.

47 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100259138 2 424 + 423 Gaps:4 87.58 499 72.54 0.0 protein disulfide-isomerase-like
blastp_kegg lcl|cit:102609645 2 434 + 433 Gaps:7 88.80 500 69.37 0.0 protein disulfide-isomerase-like
blastp_kegg lcl|gmx:100170705 2 424 + 423 Gaps:5 85.33 525 69.20 0.0 protein disulfide isomerase-like protein
blastp_kegg lcl|rcu:RCOM_1030540 2 435 + 434 Gaps:6 89.76 498 68.68 0.0 protein disulfide isomerase putative (EC:2.4.1.119)
blastp_kegg lcl|gmx:100788687 2 424 + 423 Gaps:5 89.07 503 68.30 0.0 protein disulfide-isomerase-like
blastp_kegg lcl|pvu:PHAVU_009G126800g 2 434 + 433 Gaps:5 89.45 512 67.03 0.0 hypothetical protein
blastp_kegg lcl|tcc:TCM_035146 3 435 + 433 Gaps:7 75.81 587 68.31 0.0 PDI-like 1-1 isoform 1
blastp_kegg lcl|sot:102592089 2 427 + 426 Gaps:4 88.93 497 69.00 0.0 protein disulfide-isomerase-like
blastp_kegg lcl|gmx:100788702 1 435 + 435 Gaps:7 89.72 496 68.09 0.0 protein disulfide-isomerase-like
blastp_kegg lcl|pda:103713816 2 434 + 433 Gaps:8 87.87 511 67.93 0.0 protein disulfide-isomerase-like
blastp_pdb 3f8u_C 2 417 + 416 Gaps:33 90.44 481 37.24 2e-61 mol:protein length:481 Protein disulfide-isomerase A3ERp57
blastp_pdb 3f8u_A 2 417 + 416 Gaps:33 90.44 481 37.24 2e-61 mol:protein length:481 Protein disulfide-isomerase A3ERp57
blastp_pdb 3boa_A 3 428 + 426 Gaps:56 85.71 504 35.88 1e-35 mol:protein length:504 Protein disulfide-isomerase
blastp_pdb 2b5e_A 3 428 + 426 Gaps:56 85.71 504 35.88 1e-35 mol:protein length:504 Protein disulfide-isomerase
blastp_pdb 3uem_A 91 416 + 326 Gaps:20 90.30 361 31.60 3e-35 mol:protein length:361 Protein disulfide-isomerase
blastp_pdb 2dmm_A 294 417 + 124 Gaps:3 88.03 142 48.80 6e-34 mol:protein length:142 Protein disulfide-isomerase A3
blastp_pdb 2kp1_A 313 418 + 106 Gaps:8 89.26 121 48.15 5e-23 mol:protein length:121 Protein disulfide-isomerase
blastp_pdb 2djj_A 313 418 + 106 Gaps:8 89.26 121 48.15 5e-23 mol:protein length:121 Protein disulfide-isomerase
blastp_pdb 2dj3_A 313 426 + 114 Gaps:3 87.97 133 39.32 6e-23 mol:protein length:133 Protein disulfide-isomerase A4
blastp_pdb 1x5c_A 313 416 + 104 Gaps:4 85.95 121 38.46 6e-20 mol:protein length:121 Protein disulfide-isomerase
blastp_uniprot_sprot sp|Q9XF61|PDI_DATGL 2 422 + 421 Gaps:4 85.80 507 73.10 0.0 Protein disulfide-isomerase OS Datisca glomerata GN PDI PE 1 SV 1
blastp_uniprot_sprot sp|Q43116|PDI_RICCO 2 435 + 434 Gaps:6 89.76 498 68.23 0.0 Protein disulfide-isomerase OS Ricinus communis PE 1 SV 1
blastp_uniprot_sprot sp|P29828|PDI_MEDSA 2 422 + 421 Gaps:6 84.96 512 69.20 0.0 Protein disulfide-isomerase OS Medicago sativa GN PDI PE 1 SV 1
blastp_uniprot_sprot sp|Q9SRG3|PDI12_ARATH 1 421 + 421 Gaps:5 85.24 508 62.12 0.0 Protein disulfide isomerase-like 1-2 OS Arabidopsis thaliana GN PDIL1-2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9XI01|PDI11_ARATH 2 420 + 419 Gaps:4 86.43 501 61.66 0.0 Protein disulfide isomerase-like 1-1 OS Arabidopsis thaliana GN PDIL1-1 PE 1 SV 1
blastp_uniprot_sprot sp|Q53LQ0|PDI11_ORYSJ 2 435 + 434 Gaps:11 88.48 512 60.26 2e-180 Protein disulfide isomerase-like 1-1 OS Oryza sativa subsp. japonica GN PDIL1-1 PE 2 SV 1
blastp_uniprot_sprot sp|P52588|PDI_MAIZE 2 420 + 419 Gaps:5 84.21 513 60.65 5e-175 Protein disulfide-isomerase OS Zea mays GN PDI PE 2 SV 1
blastp_uniprot_sprot sp|P80284|PDI_HORVU 3 424 + 422 Gaps:6 84.80 513 59.77 2e-172 Protein disulfide-isomerase OS Hordeum vulgare GN PDI PE 1 SV 2
blastp_uniprot_sprot sp|P52589|PDI_WHEAT 3 424 + 422 Gaps:6 84.47 515 59.77 1e-171 Protein disulfide-isomerase OS Triticum aestivum GN PDI PE 2 SV 1
blastp_uniprot_sprot sp|Q7XRB5|PDI12_ORYSJ 2 419 + 418 Gaps:8 83.56 517 54.86 1e-163 Protein disulfide isomerase-like 1-2 OS Oryza sativa subsp. japonica GN PDIL1-2 PE 2 SV 2

17 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
TIGRFAM 2 427 426 TIGR01130 none ER_PDI_fam: protein disulfide isomerase IPR005792
PRINTS 333 341 9 PR00421 none Thioredoxin family signature none
PRINTS 341 350 10 PR00421 none Thioredoxin family signature none
PRINTS 383 394 12 PR00421 none Thioredoxin family signature none
SUPERFAMILY 2 78 77 SSF52833 none none IPR012336
ProSiteProfiles 292 420 129 PS51352 none Thioredoxin domain profile. IPR012336
Gene3D 96 190 95 G3DSA:3.40.30.10 none none IPR012336
PANTHER 2 434 433 PTHR18929 none none none
SUPERFAMILY 278 419 142 SSF52833 none none IPR012336
Pfam 106 290 185 PF13848 none Thioredoxin-like domain none
SUPERFAMILY 198 310 113 SSF52833 none none IPR012336
SUPERFAMILY 83 182 100 SSF52833 none none IPR012336
Gene3D 310 421 112 G3DSA:3.40.30.10 none none IPR012336
Gene3D 2 95 94 G3DSA:3.40.30.10 none none IPR012336
PANTHER 2 434 433 PTHR18929:SF74 none none none
Pfam 2 77 76 PF00085 none Thioredoxin IPR013766
Pfam 314 418 105 PF00085 none Thioredoxin IPR013766

0 Localization

2 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2002_QTL13_peak_Bud_burst_3P Qrob_Chr10 10 s_1B1AG7_637 s_1A3A1N_709 19,44 0 49,44 lod 3 5,6
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5

0 Targeting