Protein : Qrob_P0155720.2 Q. robur
Protein Identifier  ? Qrob_P0155720.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=4) PTHR31375:SF10 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN-RELATED (PTHR31375:SF10) Code Enzyme  EC:3.2.1.67
Gene Prediction Quality  validated Protein length 

Sequence

Length: 399  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0005975 carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
GO:0004650 polygalacturonase activity Catalysis of the random hydrolysis of (1->4)-alpha-D-galactosiduronic linkages in pectate and other galacturonans.

39 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cmo:103493242 1 398 + 398 Gaps:8 100.00 404 57.67 4e-154 exopolygalacturonase
blastp_kegg lcl|mdm:103445827 12 398 + 387 Gaps:2 96.75 400 54.26 1e-153 exopolygalacturonase-like
blastp_kegg lcl|pxb:103957362 12 398 + 387 Gaps:2 96.27 402 54.52 2e-152 exopolygalacturonase-like
blastp_kegg lcl|pmum:103325908 21 398 + 378 Gaps:3 96.19 394 55.67 3e-152 exopolygalacturonase
blastp_kegg lcl|pxb:103946065 13 398 + 386 Gaps:6 98.96 386 54.97 3e-149 exopolygalacturonase-like
blastp_kegg lcl|cit:102612871 13 398 + 386 Gaps:4 87.13 443 51.30 3e-141 exopolygalacturonase-like
blastp_kegg lcl|cic:CICLE_v10023493mg 12 398 + 387 Gaps:4 97.73 396 51.16 5e-141 hypothetical protein
blastp_kegg lcl|tcc:TCM_032333 1 398 + 398 Gaps:6 87.36 451 53.81 8e-141 Pectin lyase-like superfamily protein putative
blastp_kegg lcl|fve:101302248 21 398 + 378 Gaps:9 93.12 799 54.84 2e-138 uncharacterized protein LOC101302248
blastp_kegg lcl|fve:101295263 35 398 + 364 Gaps:3 99.73 364 55.65 2e-138 exopolygalacturonase-like
blastp_pdb 1nhc_F 119 367 + 249 Gaps:22 73.51 336 27.94 5e-19 mol:protein length:336 Polygalacturonase I
blastp_pdb 1nhc_E 119 367 + 249 Gaps:22 73.51 336 27.94 5e-19 mol:protein length:336 Polygalacturonase I
blastp_pdb 1nhc_D 119 367 + 249 Gaps:22 73.51 336 27.94 5e-19 mol:protein length:336 Polygalacturonase I
blastp_pdb 1nhc_C 119 367 + 249 Gaps:22 73.51 336 27.94 5e-19 mol:protein length:336 Polygalacturonase I
blastp_pdb 1nhc_B 119 367 + 249 Gaps:22 73.51 336 27.94 5e-19 mol:protein length:336 Polygalacturonase I
blastp_pdb 1nhc_A 119 367 + 249 Gaps:22 73.51 336 27.94 5e-19 mol:protein length:336 Polygalacturonase I
blastp_pdb 1bhe_A 118 367 + 250 Gaps:28 67.02 376 29.76 8e-18 mol:protein length:376 POLYGALACTURONASE
blastp_pdb 2iq7_G 111 359 + 249 Gaps:20 73.45 339 29.32 3e-17 mol:protein length:339 endopolygalacturonase
blastp_pdb 2iq7_F 111 359 + 249 Gaps:20 73.45 339 29.32 3e-17 mol:protein length:339 endopolygalacturonase
blastp_pdb 2iq7_E 111 359 + 249 Gaps:20 73.45 339 29.32 3e-17 mol:protein length:339 endopolygalacturonase
blastp_uniprot_sprot sp|Q6H9K0|PGLR2_PLAAC 31 395 + 365 Gaps:5 96.55 377 46.98 5e-111 Exopolygalacturonase (Fragment) OS Platanus acerifolia GN plaa2 PE 1 SV 1
blastp_uniprot_sprot sp|Q39766|PGLR_GOSBA 12 397 + 386 Gaps:4 94.35 407 44.01 2e-109 Polygalacturonase OS Gossypium barbadense GN G9 PE 2 SV 1
blastp_uniprot_sprot sp|Q39786|PGLR_GOSHI 12 397 + 386 Gaps:4 94.35 407 43.75 2e-108 Polygalacturonase OS Gossypium hirsutum GN G9 PE 2 SV 1
blastp_uniprot_sprot sp|P24548|PGLR_OENOR 45 397 + 353 Gaps:3 97.79 362 43.50 3e-101 Exopolygalacturonase (Fragment) OS Oenothera organensis PE 2 SV 1
blastp_uniprot_sprot sp|Q05967|PGLR_TOBAC 1 397 + 397 Gaps:13 97.47 396 40.16 8e-99 Polygalacturonase OS Nicotiana tabacum GN PG1 PE 2 SV 1
blastp_uniprot_sprot sp|P35337|PGLR_BRANA 44 398 + 355 Gaps:4 89.42 397 43.10 6e-98 Polygalacturonase OS Brassica napus PE 2 SV 1
blastp_uniprot_sprot sp|P35339|PGLR3_MAIZE 12 397 + 386 Gaps:15 97.32 410 38.85 5e-96 Exopolygalacturonase OS Zea mays GN PG2C PE 2 SV 1
blastp_uniprot_sprot sp|P26216|PGLR1_MAIZE 23 397 + 375 Gaps:4 91.95 410 40.58 1e-95 Exopolygalacturonase OS Zea mays GN PG1 PE 1 SV 1
blastp_uniprot_sprot sp|P35338|PGLR2_MAIZE 23 397 + 375 Gaps:4 91.95 410 40.32 5e-95 Exopolygalacturonase OS Zea mays GN PG9 PE 2 SV 1
blastp_uniprot_sprot sp|P48979|PGLR_PRUPE 13 398 + 386 Gaps:8 97.71 393 41.15 4e-91 Polygalacturonase OS Prunus persica PE 2 SV 1

15 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 5 15 11 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 16 20 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Pfam 58 396 339 PF00295 none Glycosyl hydrolases family 28 IPR000743
ProSitePatterns 238 251 14 PS00502 none Polygalacturonase active site. IPR000743
Gene3D 14 397 384 G3DSA:2.160.20.10 none none IPR012334
Phobius 1 20 20 SIGNAL_PEPTIDE none Signal peptide region none
Phobius 21 398 378 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 12 398 387 PTHR31375 none none none
Phobius 1 4 4 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
SMART 261 282 22 SM00710 none Parallel beta-helix repeats IPR006626
SMART 324 351 28 SM00710 none Parallel beta-helix repeats IPR006626
SMART 208 229 22 SM00710 none Parallel beta-helix repeats IPR006626
SMART 181 207 27 SM00710 none Parallel beta-helix repeats IPR006626
SUPERFAMILY 18 398 381 SSF51126 none none IPR011050
PANTHER 12 398 387 PTHR31375:SF10 none none none

3 Localization

Analysis Start End Length
SignalP_GRAM_POSITIVE 1 26 25
SignalP_EUK 1 26 25
SignalP_GRAM_NEGATIVE 1 24 23

0 Qtllist

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 26   Secretory pathway 1 0.964 0.018 NON-PLANT 26