Protein : Qrob_P0153860.2 Q. robur
Protein Identifier  ? Qrob_P0153860.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=4) 3.4.16.2 - Lysosomal Pro-Xaa carboxypeptidase. Code Enzyme  EC:3.4.16.2
Gene Prediction Quality  validated Protein length 

Sequence

Length: 511  
Kegg Orthology  K01285
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0006508 proteolysis The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO:0008236 serine-type peptidase activity Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).

32 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0010s23860g 15 506 + 492 Gaps:7 95.32 513 63.39 0.0 POPTRDRAFT_770625 hypothetical protein
blastp_kegg lcl|vvi:100259911 14 506 + 493 Gaps:9 97.81 503 61.38 0.0 lysosomal Pro-X carboxypeptidase-like
blastp_kegg lcl|vvi:100265353 14 507 + 494 Gaps:12 97.02 503 59.02 0.0 lysosomal Pro-X carboxypeptidase-like
blastp_kegg lcl|vvi:100244772 14 507 + 494 Gaps:12 97.03 505 59.18 0.0 lysosomal Pro-X carboxypeptidase-like
blastp_kegg lcl|tcc:TCM_046934 19 509 + 491 Gaps:12 96.44 505 58.32 0.0 Serine carboxypeptidase S28 family protein
blastp_kegg lcl|cit:102630872 17 506 + 490 Gaps:11 96.09 511 60.08 0.0 lysosomal Pro-X carboxypeptidase-like
blastp_kegg lcl|vvi:100243061 14 506 + 493 Gaps:13 94.12 510 59.17 0.0 lysosomal Pro-X carboxypeptidase-like
blastp_kegg lcl|cit:102628854 21 509 + 489 Gaps:5 96.81 502 55.97 0.0 lysosomal Pro-X carboxypeptidase-like
blastp_kegg lcl|cic:CICLE_v10028401mg 56 509 + 454 Gaps:4 98.69 458 57.96 0.0 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10033696mg 17 506 + 490 Gaps:16 96.05 506 59.67 0.0 hypothetical protein
blastp_pdb 3n2z_B 63 504 + 442 Gaps:31 99.78 446 38.43 6e-98 mol:protein length:446 Lysosomal Pro-X carboxypeptidase
blastp_pdb 3n0t_D 65 498 + 434 Gaps:42 94.24 469 33.71 2e-74 mol:protein length:469 Dipeptidyl peptidase 2
blastp_pdb 3n0t_C 65 498 + 434 Gaps:42 94.24 469 33.71 2e-74 mol:protein length:469 Dipeptidyl peptidase 2
blastp_pdb 3n0t_B 65 498 + 434 Gaps:42 94.24 469 33.71 2e-74 mol:protein length:469 Dipeptidyl peptidase 2
blastp_pdb 3n0t_A 65 498 + 434 Gaps:42 94.24 469 33.71 2e-74 mol:protein length:469 Dipeptidyl peptidase 2
blastp_pdb 3jyh_D 65 498 + 434 Gaps:42 94.24 469 33.71 2e-74 mol:protein length:469 Dipeptidyl-peptidase 2
blastp_pdb 3jyh_C 65 498 + 434 Gaps:42 94.24 469 33.71 2e-74 mol:protein length:469 Dipeptidyl-peptidase 2
blastp_pdb 3jyh_B 65 498 + 434 Gaps:42 94.24 469 33.71 2e-74 mol:protein length:469 Dipeptidyl-peptidase 2
blastp_pdb 3jyh_A 65 498 + 434 Gaps:42 94.24 469 33.71 2e-74 mol:protein length:469 Dipeptidyl-peptidase 2
blastp_uniprot_sprot sp|Q5RBU7|PCP_PONAB 35 508 + 474 Gaps:36 95.16 496 38.14 3e-100 Lysosomal Pro-X carboxypeptidase OS Pongo abelii GN PRCP PE 2 SV 1
blastp_uniprot_sprot sp|P42785|PCP_HUMAN 30 508 + 479 Gaps:36 96.17 496 37.95 9e-100 Lysosomal Pro-X carboxypeptidase OS Homo sapiens GN PRCP PE 1 SV 1
blastp_uniprot_sprot sp|Q7TMR0|PCP_MOUSE 30 507 + 478 Gaps:38 96.95 491 35.29 2e-91 Lysosomal Pro-X carboxypeptidase OS Mus musculus GN Prcp PE 2 SV 2
blastp_uniprot_sprot sp|Q2TA14|PCP_BOVIN 65 509 + 445 Gaps:30 89.98 499 36.08 1e-88 Lysosomal Pro-X carboxypeptidase OS Bos taurus GN PRCP PE 2 SV 1
blastp_uniprot_sprot sp|Q9UHL4|DPP2_HUMAN 65 498 + 434 Gaps:42 89.84 492 33.71 1e-73 Dipeptidyl peptidase 2 OS Homo sapiens GN DPP7 PE 1 SV 3
blastp_uniprot_sprot sp|Q9EPB1|DPP2_RAT 64 498 + 435 Gaps:44 88.60 500 33.63 9e-72 Dipeptidyl peptidase 2 OS Rattus norvegicus GN Dpp7 PE 1 SV 1
blastp_uniprot_sprot sp|Q9ET22|DPP2_MOUSE 64 498 + 435 Gaps:44 87.55 506 33.18 7e-64 Dipeptidyl peptidase 2 OS Mus musculus GN Dpp7 PE 2 SV 2
blastp_uniprot_sprot sp|P34676|PCP5_CAEEL 59 501 + 443 Gaps:41 91.52 507 31.68 5e-55 Prolyl carboxy peptidase like protein 5 OS Caenorhabditis elegans GN pcp-5 PE 1 SV 1
blastp_uniprot_sprot sp|Q9QXE5|TSSP_MOUSE 69 508 + 440 Gaps:63 87.82 509 29.31 3e-38 Thymus-specific serine protease OS Mus musculus GN Prss16 PE 2 SV 1
blastp_uniprot_sprot sp|P34610|PCP1_CAEEL 68 500 + 433 Gaps:69 82.48 565 28.54 3e-37 Putative serine protease pcp-1 OS Caenorhabditis elegans GN pcp-1 PE 1 SV 2
rpsblast_cdd gnl|CDD|114307 72 489 + 418 Gaps:61 99.54 433 31.55 4e-64 pfam05577 Peptidase_S28 Serine carboxypeptidase S28. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase dipeptidyl-peptidase II and thymus-specific serine peptidase.

11 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 1 13 13 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Gene3D 423 446 24 G3DSA:3.40.50.1820 none none IPR029058
Gene3D 131 231 101 G3DSA:3.40.50.1820 none none IPR029058
PANTHER 64 506 443 PTHR11010 none none IPR008758
PANTHER 64 506 443 PTHR11010:SF31 none none none
Phobius 1 30 30 SIGNAL_PEPTIDE none Signal peptide region none
Pfam 72 489 418 PF05577 none Serine carboxypeptidase S28 IPR008758
SUPERFAMILY 139 409 271 SSF53474 none none IPR029058
Phobius 14 25 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 26 30 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 31 510 480 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

2 Localization

Analysis Start End Length
TMHMM 12 34 22
SignalP_EUK 1 30 29

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran1_2004_QTL4_peak_Bud_burst_3P Qrob_Chr04 4 s_1AHUWN_1101 s_1BRNG7_1618 30,55 0 47,55 lod 2,8 7,4
Bourran2_2002_QTL10_peak_Bud_burst_A4 Qrob_Chr04 4 s_1B59MJ_737 s_1BGLSD_999 15,86 0 41,66 lod 2,8 4
Bourran1_2000_QTL3_peak_Bud_burst_3P Qrob_Chr04 4 s_1A6DJQ_418 s_1A1PEC_1268 23,09 9,09 44,09 lod 2,3 6,8
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL7_d13Cf Qrob_Chr04 4 s_1B91MJ_705 s_1AHIKX_640 33.92 12,11 48,31 lod 6.1865 0.023

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 30   Secretory pathway 1 0.886 0.063 NON-PLANT 30