Protein : Qrob_P0153540.2 Q. robur
Protein Identifier  ? Qrob_P0153540.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Gene Prediction Quality  validated Protein length 

Sequence

Length: 71  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0020037 heme binding Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring.
GO:0009055 electron carrier activity Any molecular entity that serves as an electron acceptor and electron donor in an electron transport chain. An electron transport chain is a process in which a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient.

22 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|mus:103983621 1 37 + 37 none 33.04 112 89.19 6e-17 cytochrome c-like
blastp_kegg lcl|mus:103988136 1 37 + 37 none 33.04 112 89.19 9e-17 cytochrome c
blastp_kegg lcl|zma:100383938 1 37 + 37 none 33.04 112 89.19 1e-16 cytochrome c
blastp_kegg lcl|obr:102709645 1 37 + 37 none 33.04 112 89.19 1e-16 cytochrome c-like
blastp_kegg lcl|dosa:Os05t0420600-01 1 37 + 37 none 33.04 112 89.19 1e-16 Os05g0420600 CC1 CYTOCHROME_C_1 Cytochrome c.
blastp_kegg lcl|osa:4338825 1 37 + 37 none 33.04 112 89.19 1e-16 Os05g0420600
blastp_kegg lcl|bdi:100826967 1 37 + 37 none 32.74 113 89.19 2e-16 cytochrome c-like
blastp_kegg lcl|mus:103992644 1 37 + 37 none 33.04 112 86.49 2e-16 cytochrome c-like
blastp_kegg lcl|sly:101261271 1 37 + 37 none 33.04 112 86.49 3e-16 cytochrome c-like
blastp_kegg lcl|mus:103971867 1 37 + 37 none 32.74 113 86.49 4e-16 cytochrome c-like
blastp_pdb 1ccr_A 2 37 + 36 none 32.14 112 88.89 1e-17 mol:protein length:112 CYTOCHROME C
blastp_pdb 2aiu_A 10 36 + 27 none 25.71 105 62.96 6e-06 mol:protein length:105 Cytochrome c testis-specific
blastp_uniprot_sprot sp|Q0DI31|CYC_ORYSJ 1 37 + 37 none 33.04 112 89.19 5e-18 Cytochrome c OS Oryza sativa subsp. japonica GN CC-1 PE 1 SV 1
blastp_uniprot_sprot sp|A2Y4S9|CYC_ORYSI 1 37 + 37 none 33.04 112 89.19 5e-18 Cytochrome c OS Oryza sativa subsp. indica GN CC-1 PE 3 SV 1
blastp_uniprot_sprot sp|O22642|CYC_FRIAG 1 37 + 37 none 32.74 113 89.19 5e-17 Cytochrome c OS Fritillaria agrestis GN CYTC PE 3 SV 3
blastp_uniprot_sprot sp|P00056|CYC_MAIZE 2 37 + 36 none 32.43 111 86.11 2e-16 Cytochrome c OS Zea mays PE 1 SV 1
blastp_uniprot_sprot sp|Q9T0G2|CYC3_ARATH 1 37 + 37 none 33.04 112 81.08 3e-16 Probable cytochrome c At4g10040 OS Arabidopsis thaliana GN At4g10040 PE 3 SV 1
blastp_uniprot_sprot sp|P00074|CYC_GINBI 2 37 + 36 none 31.86 113 83.33 3e-16 Cytochrome c OS Ginkgo biloba PE 1 SV 1
blastp_uniprot_sprot sp|P00065|CYC_ARUMA 2 37 + 36 none 32.43 111 83.33 4e-16 Cytochrome c OS Arum maculatum PE 1 SV 1
blastp_uniprot_sprot sp|P00063|CYC_ACENE 2 37 + 36 none 32.14 112 83.33 5e-16 Cytochrome c OS Acer negundo PE 1 SV 1
blastp_uniprot_sprot sp|P00061|CYC_SOLTU 2 37 + 36 none 32.43 111 83.33 6e-16 Cytochrome c OS Solanum tuberosum PE 1 SV 1
blastp_uniprot_sprot sp|P00062|CYC_SAMNI 2 37 + 36 none 32.43 111 83.33 6e-16 Cytochrome c OS Sambucus nigra PE 1 SV 1

3 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 9 36 28 G3DSA:1.10.760.10 none none IPR009056
ProSiteProfiles 10 70 61 PS51007 none Cytochrome c family profile. IPR009056
SUPERFAMILY 7 34 28 SSF46626 none none IPR009056

0 Localization

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran1_2004_QTL4_peak_Bud_burst_3P Qrob_Chr04 4 s_1AHUWN_1101 s_1BRNG7_1618 30,55 0 47,55 lod 2,8 7,4
Bourran2_2002_QTL10_peak_Bud_burst_A4 Qrob_Chr04 4 s_1B59MJ_737 s_1BGLSD_999 15,86 0 41,66 lod 2,8 4
Bourran1_2000_QTL3_peak_Bud_burst_3P Qrob_Chr04 4 s_1A6DJQ_418 s_1A1PEC_1268 23,09 9,09 44,09 lod 2,3 6,8
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL7_d13Cf Qrob_Chr04 4 s_1B91MJ_705 s_1AHIKX_640 33.92 12,11 48,31 lod 6.1865 0.023

0 Targeting