Protein : Qrob_P0153130.2 Q. robur
Protein Identifier  ? Qrob_P0153130.2 Organism . Name  Quercus robur
Score  98.2 Score Type  egn
Protein Description  (M=2) PTHR21493//PTHR21493:SF16 - CGI-141-RELATED/LIPASE CONTAINING PROTEIN // SUBFAMILY NOT NAMED Code Enzyme  EC:3.1.1.3
Gene Prediction Quality  validated Protein length 

Sequence

Length: 474  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0006629 lipid metabolic process The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.
GO:0016042 lipid catabolic process The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.

17 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_015194 1 473 + 473 Gaps:20 100.00 453 85.21 0.0 Alpha/beta-Hydrolases superfamily protein isoform 1
blastp_kegg lcl|rcu:RCOM_1583280 1 473 + 473 Gaps:23 100.00 456 84.43 0.0 calmodulin-binding heat-shock protein putative
blastp_kegg lcl|cic:CICLE_v10004957mg 1 470 + 470 Gaps:23 99.55 449 80.09 0.0 hypothetical protein
blastp_kegg lcl|cit:102618385 1 470 + 470 Gaps:23 99.55 449 79.87 0.0 uncharacterized LOC102618385
blastp_kegg lcl|pper:PRUPE_ppa006065mg 1 419 + 419 Gaps:20 93.01 429 87.97 0.0 hypothetical protein
blastp_kegg lcl|gmx:100800742 1 468 + 468 Gaps:25 100.00 447 83.89 0.0 uncharacterized LOC100800742
blastp_kegg lcl|pop:POPTR_0012s13050g 1 472 + 472 Gaps:23 99.78 450 83.74 0.0 POPTRDRAFT_806609 lipase class 3 family protein
blastp_kegg lcl|cam:101492754 1 468 + 468 Gaps:24 100.00 446 83.63 0.0 uncharacterized LOC101492754
blastp_kegg lcl|pxb:103934915 1 448 + 448 Gaps:23 97.93 434 84.71 0.0 uncharacterized LOC103934915
blastp_kegg lcl|pvu:PHAVU_004G113800g 1 468 + 468 Gaps:29 98.44 450 81.49 0.0 hypothetical protein
rpsblast_cdd gnl|CDD|201961 109 247 + 139 Gaps:14 100.00 141 30.50 2e-24 pfam01764 Lipase_3 Lipase (class 3).
rpsblast_cdd gnl|CDD|73213 44 241 + 198 Gaps:18 85.59 229 22.96 9e-22 cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides glycerol and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation " the process of becoming active at the lipid/water interface although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu but unlike most serine proteases the active site is buried inside the structure. A "lid" or "flap" covers the active site making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation allowing the lipid substrate access to the active site. .
rpsblast_cdd gnl|CDD|112694 9 74 + 66 Gaps:7 96.05 76 45.21 4e-17 pfam03893 Lipase3_N Lipase 3 N-terminal region. N terminal region to pfam01764 found on a subset of Lipase 3 containing proteins.
rpsblast_cdd gnl|CDD|29806 143 241 + 99 Gaps:11 64.05 153 29.59 2e-12 cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides glycerol and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation" the process of becoming active at the lipid/water interface although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu but unlike most serine proteases the active site is buried inside the structure. A "lid" or "flap" covers the active site making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation allowing the lipid substrate access to the active site..
rpsblast_cdd gnl|CDD|178439 139 252 + 114 Gaps:6 17.06 633 31.48 5e-10 PLN02847 PLN02847 triacylglycerol lipase.
rpsblast_kog gnl|CDD|37299 1 462 + 462 Gaps:45 77.68 596 36.93 2e-99 KOG2088 KOG2088 KOG2088 Predicted lipase/calmodulin-binding heat-shock protein [Lipid transport and metabolism Posttranslational modification protein turnover chaperones Signal transduction mechanisms].
rpsblast_kog gnl|CDD|39769 52 241 + 190 Gaps:21 57.44 336 26.94 1e-09 KOG4569 KOG4569 KOG4569 Predicted lipase [Lipid transport and metabolism].

14 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 41 270 230 SSF53474 none none IPR029058
Phobius 11 15 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Pfam 9 73 65 PF03893 none Lipase 3 N-terminal region IPR005592
Phobius 3 10 8 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
PANTHER 317 473 157 PTHR21493 none none none
Phobius 16 473 458 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 2 2 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Coils 380 401 22 Coil none none none
PANTHER 8 298 291 PTHR21493 none none none
Phobius 1 15 15 SIGNAL_PEPTIDE none Signal peptide region none
PANTHER 8 298 291 PTHR21493:SF16 none none none
PANTHER 317 473 157 PTHR21493:SF16 none none none
Gene3D 42 245 204 G3DSA:3.40.50.1820 none none IPR029058
Pfam 109 244 136 PF01764 "Reactome:REACT_14797","Reactome:REACT_604" Lipase (class 3) IPR002921

1 Localization

Analysis Start End Length
SignalP_EUK 1 19 18

11 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL4_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,45 0 27,45 lod 4,5 10,6
Bourran_2000_2002_QTL7_Delta.F Qrob_Chr09 9 v_5944_442 s_1BA1PC_866 23.51 10,96 35,74 lod 4.1466 0.041
Bourran2_2003_QTL11_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 4,16 48,16 lod 2,3 5,1
Bourran2_2003_QTL13_peak_Bud_burst_A4 Qrob_Chr09 9 s_1AP8MN_635 s_1A3QQ_692 18,18 10,88 25,88 lod 3,4 7,2
Bourran2_2004_QTL12_peak_Bud_burst_3P Qrob_Chr09 9 s_1BDO6G_250 s_1A83AM_496 34,31 9,31 44,31 lod 3,6 7,6
Bourran2_2004_QTL14_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,83 10,33 22,33 lod 3,8 9
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
PM_1999_QTL15_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 9,16 47,16 lod 3,6 6,5
Bourran2_2002_QTL12_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,83 4,33 33,33 lod 6,5 9,1
Bourran2_2014_nEpis_A4 Qrob_Chr09 9 v_AQ16YP22_198 s_1BM1HR_1387 18,91 18,91 43,71 lod 2,6242 5,9

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 18   Secretory pathway 2 0.908 0.029 NON-PLANT 18