Protein : Qrob_P0152690.2 Q. robur
Protein Identifier  ? Qrob_P0152690.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=77) PF00168 - C2 domain Gene Prediction Quality  validated
Protein length 

Sequence

Length: 292  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

13 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa009523mg 1 274 + 274 Gaps:31 96.18 288 68.59 2e-110 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10005598mg 1 291 + 291 Gaps:22 100.00 277 67.15 5e-109 hypothetical protein
blastp_kegg lcl|pmum:103333176 1 283 + 283 Gaps:31 99.65 289 66.67 4e-108 WW domain-containing protein C11B10.08
blastp_kegg lcl|csv:101224685 1 291 + 291 Gaps:26 100.00 291 63.92 7e-107 uncharacterized LOC101224685
blastp_kegg lcl|pvu:PHAVU_004G110400g 1 291 + 291 Gaps:43 100.00 308 62.01 3e-101 hypothetical protein
blastp_kegg lcl|vvi:100249100 1 273 + 273 Gaps:20 95.45 286 62.27 5e-101 uncharacterized LOC100249100
blastp_kegg lcl|tcc:TCM_015225 1 275 + 275 Gaps:11 96.03 277 66.92 7e-100 Calcium-dependent lipid-binding family protein
blastp_kegg lcl|cmo:103484099 1 291 + 291 Gaps:24 100.00 293 63.48 2e-99 zinc finger matrin-type protein CG9776
blastp_kegg lcl|vvi:100852496 1 279 + 279 Gaps:23 100.00 268 62.69 6e-99 uncharacterized LOC100852496
blastp_kegg lcl|fve:101294323 1 283 + 283 Gaps:14 99.28 277 63.27 2e-96 uncharacterized protein LOC101294323
rpsblast_cdd gnl|CDD|176016 6 129 + 124 Gaps:5 100.00 125 40.00 2e-32 cd04051 C2_SRC2_like C2 domain present in Soybean genes Regulated by Cold 2 (SRC2)-like proteins. SRC2 production is a response to pathogen infiltration. The initial response of increased Ca2+ concentrations are coupled to downstream signal transduction pathways via calcium binding proteins. SRC2 contains a single C2 domain which localizes to the plasma membrane and is involved in Ca2+ dependent protein binding. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids inositol polyphosphates and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain such as protein kinase C or membrane trafficking proteins which contain at least two C2 domains such as synaptotagmin 1. However there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues primarily aspartates that serve as ligands for calcium ions.
rpsblast_cdd gnl|CDD|175973 7 103 + 97 Gaps:5 90.20 102 27.17 2e-10 cd00030 C2 C2 domain. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids inositol polyphosphates and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain such as protein kinase C or membrane trafficking proteins which contain at least two C2 domains such as synaptotagmin 1. However there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues primarily aspartates that serve as ligands for calcium ions.
rpsblast_cdd gnl|CDD|201052 7 94 + 88 Gaps:7 100.00 85 24.71 9e-08 pfam00168 C2 C2 domain.

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 1 217 217 PTHR32246:SF17 none none none
SUPERFAMILY 4 134 131 SSF49562 none none IPR000008
PANTHER 1 217 217 PTHR32246 none none none
ProSiteProfiles 1 94 94 PS50004 none C2 domain profile. IPR000008
Pfam 7 81 75 PF00168 none C2 domain IPR000008
SMART 6 109 104 SM00239 none Protein kinase C conserved region 2 (CalB) IPR000008
Gene3D 5 134 130 G3DSA:2.60.40.150 none none IPR000008

1 Localization

Analysis Start End Length
TMHMM 233 255 22

11 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL4_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,45 0 27,45 lod 4,5 10,6
Bourran_2000_2002_QTL7_Delta.F Qrob_Chr09 9 v_5944_442 s_1BA1PC_866 23.51 10,96 35,74 lod 4.1466 0.041
Bourran2_2003_QTL11_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 4,16 48,16 lod 2,3 5,1
Bourran2_2003_QTL13_peak_Bud_burst_A4 Qrob_Chr09 9 s_1AP8MN_635 s_1A3QQ_692 18,18 10,88 25,88 lod 3,4 7,2
Bourran2_2004_QTL12_peak_Bud_burst_3P Qrob_Chr09 9 s_1BDO6G_250 s_1A83AM_496 34,31 9,31 44,31 lod 3,6 7,6
Bourran2_2004_QTL14_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,83 10,33 22,33 lod 3,8 9
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
PM_1999_QTL15_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 9,16 47,16 lod 3,6 6,5
Bourran2_2002_QTL12_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,83 4,33 33,33 lod 6,5 9,1
Bourran2_2014_nEpis_A4 Qrob_Chr09 9 v_AQ16YP22_198 s_1BM1HR_1387 18,91 18,91 43,71 lod 2,6242 5,9

0 Targeting