Protein : Qrob_P0149150.2 Q. robur
Protein Identifier  ? Qrob_P0149150.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=2) PTHR14499 - POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING Gene Prediction Quality  validated
Protein length 

Sequence

Length: 462  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0051260 protein homooligomerization The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer.

27 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103337536 1 461 + 461 Gaps:10 99.15 473 77.83 0.0 BTB/POZ domain-containing protein At5g41330
blastp_kegg lcl|pxb:103963864 1 461 + 461 Gaps:10 99.15 473 75.69 0.0 BTB/POZ domain-containing protein At5g41330
blastp_kegg lcl|vvi:100854918 17 461 + 445 Gaps:5 96.98 464 78.22 0.0 BTB/POZ domain-containing protein At5g41330-like
blastp_kegg lcl|cit:102627070 1 461 + 461 Gaps:7 100.00 464 74.14 0.0 BTB/POZ domain-containing protein At5g41330-like
blastp_kegg lcl|cic:CICLE_v10020033mg 17 461 + 445 Gaps:5 95.71 466 76.01 0.0 hypothetical protein
blastp_kegg lcl|rcu:RCOM_1687090 1 461 + 461 Gaps:13 100.00 474 71.31 0.0 potassium channel tetramerization domain-containing protein putative
blastp_kegg lcl|fve:101309445 1 461 + 461 Gaps:7 99.15 472 72.65 0.0 BTB/POZ domain-containing protein At5g41330-like
blastp_kegg lcl|csv:101216493 17 461 + 445 Gaps:5 94.54 476 74.22 0.0 BTB/POZ domain-containing protein At5g41330-like
blastp_kegg lcl|pop:POPTR_0003s12940g 18 461 + 444 Gaps:5 94.13 477 75.06 0.0 POPTRDRAFT_854253 potassium channel tetramerisation domain-containing family protein
blastp_kegg lcl|cmo:103482760 17 461 + 445 Gaps:4 94.53 475 73.72 0.0 BTB/POZ domain-containing protein At5g41330
blastp_uniprot_sprot sp|Q9FN67|Y5133_ARATH 17 459 + 443 Gaps:5 97.38 458 64.80 0.0 BTB/POZ domain-containing protein At5g41330 OS Arabidopsis thaliana GN At5g41330 PE 2 SV 1
blastp_uniprot_sprot sp|Q9S7R7|Y3903_ARATH 21 458 + 438 Gaps:35 96.30 460 34.54 1e-65 BTB/POZ domain-containing protein At3g09030 OS Arabidopsis thaliana GN At3g09030 PE 2 SV 1
blastp_uniprot_sprot sp|Q9ZUH1|Y2424_ARATH 21 456 + 436 Gaps:82 97.05 441 28.27 7e-20 BTB/POZ domain-containing protein At2g24240 OS Arabidopsis thaliana GN At2g24240 PE 2 SV 1
blastp_uniprot_sprot sp|O65555|Y4094_ARATH 21 456 + 436 Gaps:58 97.05 441 27.80 2e-17 BTB/POZ domain-containing protein At4g30940 OS Arabidopsis thaliana GN At4g30940 PE 2 SV 1
blastp_uniprot_sprot sp|P0C5J9|SHKB1_RAT 4 102 + 99 Gaps:18 15.20 704 39.25 4e-08 SH3KBP1-binding protein 1 OS Rattus norvegicus GN Shkbp1 PE 1 SV 1
blastp_uniprot_sprot sp|Q6P7W2|SHKB1_MOUSE 13 102 + 90 Gaps:13 13.49 704 38.95 6e-08 SH3KBP1-binding protein 1 OS Mus musculus GN Shkbp1 PE 1 SV 1
blastp_uniprot_sprot sp|Q8TBC3|SHKB1_HUMAN 13 102 + 90 Gaps:13 13.44 707 38.95 7e-08 SH3KBP1-binding protein 1 OS Homo sapiens GN SHKBP1 PE 1 SV 2
blastp_uniprot_sprot sp|A3KMV1|SHKB1_BOVIN 14 102 + 89 Gaps:13 13.35 704 39.36 1e-07 SH3KBP1-binding protein 1 OS Bos taurus GN SHKBP1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9Y597|KCTD3_HUMAN 10 102 + 93 Gaps:13 12.02 815 39.80 6e-07 BTB/POZ domain-containing protein KCTD3 OS Homo sapiens GN KCTD3 PE 1 SV 2
blastp_uniprot_sprot sp|Q9H3F6|BACD3_HUMAN 18 115 + 98 Gaps:9 34.19 313 31.78 3e-06 BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3 OS Homo sapiens GN KCTD10 PE 1 SV 1
rpsblast_cdd gnl|CDD|202161 21 105 + 85 Gaps:14 98.91 92 35.16 4e-09 pfam02214 K_tetra K+ channel tetramerisation domain. The N-terminal cytoplasmic tetramerisation domain (T1) of voltage-gated K+ channels encodes molecular determinants for subfamily-specific assembly of alpha-subunits into functional tetrameric channels. It is distantly related to the BTB/POZ domain pfam00651.
rpsblast_cdd gnl|CDD|197585 21 102 + 82 Gaps:7 87.63 97 28.24 5e-09 smart00225 BTB Broad-Complex Tramtrack and Bric a brac. Domain in Broad-Complex Tramtrack and Bric a brac. Also known as POZ (poxvirus and zinc finger) domain. Known to be a protein-protein interaction motif found at the N-termini of several C2H2-type transcription factors as well as Shaw-type potassium channels. Known structure reveals a tightly intertwined dimer formed via interactions between N-terminal strand and helix structures. However in a subset of BTB/POZ domains these two secondary structures appear to be missing. Be aware SMART predicts BTB/POZ domains without the beta1- and alpha1-secondary structures.
rpsblast_kog gnl|CDD|37925 13 459 + 447 Gaps:16 98.28 465 27.57 3e-91 KOG2714 KOG2714 KOG2714 SETA binding protein SB1 and related proteins contain BTB/POZ domain [General function prediction only].
rpsblast_kog gnl|CDD|37927 18 140 + 123 Gaps:25 62.61 230 26.39 1e-11 KOG2716 KOG2716 KOG2716 Polymerase delta-interacting protein PDIP1 and related proteins contain BTB/POZ domain [Inorganic ion transport and metabolism].
rpsblast_kog gnl|CDD|37926 13 102 + 90 Gaps:11 46.19 210 31.96 5e-08 KOG2715 KOG2715 KOG2715 Uncharacterized conserved protein contains BTB/POZ domain [General function prediction only].
rpsblast_kog gnl|CDD|37934 20 182 + 163 Gaps:21 70.59 221 23.08 7e-08 KOG2723 KOG2723 KOG2723 Uncharacterized conserved protein contains BTB/POZ domain [General function prediction only].
rpsblast_kog gnl|CDD|36878 18 102 + 85 Gaps:10 30.79 302 29.03 1e-07 KOG1665 KOG1665 KOG1665 AFH1-interacting protein FIP2 contains BTB/POZ domain and pentapeptide repeats [General function prediction only].

8 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 18 163 146 PTHR14499:SF11 none none none
Gene3D 18 108 91 G3DSA:3.30.710.10 none none none
SUPERFAMILY 111 360 250 SSF101908 none none none
SMART 19 113 95 SM00225 none Broad-Complex, Tramtrack and Bric a brac IPR000210
Gene3D 126 455 330 G3DSA:2.130.10.10 none none IPR015943
Pfam 21 104 84 PF02214 none BTB/POZ domain IPR003131
PANTHER 18 163 146 PTHR14499 none none none
SUPERFAMILY 18 104 87 SSF54695 none none IPR011333

0 Localization

2 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7

0 Targeting