Protein : Qrob_P0146610.2 Q. robur
Protein Identifier  ? Qrob_P0146610.2 Organism . Name  Quercus robur
Protein Description  (M=127) PF13947 - Wall-associated receptor kinase galacturonan-binding Alias (in v1)  Qrob_P0881050.1
Gene Prediction Quality  manual_v2 Protein length 

Sequence

Length: 369  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0030247 polysaccharide binding Interacting selectively and non-covalently with any polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.

21 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pvu:PHAVU_007G138200g 11 291 + 281 Gaps:12 36.86 757 47.67 2e-65 hypothetical protein
blastp_kegg lcl|vvi:100252663 38 292 + 255 Gaps:10 33.83 736 49.40 6e-64 wall-associated receptor kinase 2-like
blastp_kegg lcl|cam:101506328 26 292 + 267 Gaps:14 35.90 766 46.18 8e-64 wall-associated receptor kinase 2-like
blastp_kegg lcl|gmx:100798027 21 292 + 272 Gaps:9 36.25 753 43.59 6e-62 wall-associated receptor kinase 3-like
blastp_kegg lcl|mdm:103452204 9 292 + 284 Gaps:16 37.96 764 44.83 4e-61 wall-associated receptor kinase 2-like
blastp_kegg lcl|pper:PRUPE_ppa021436mg 1 299 + 299 Gaps:30 38.86 754 46.76 5e-61 hypothetical protein
blastp_kegg lcl|tcc:TCM_035270 6 291 + 286 Gaps:10 37.32 745 45.32 9e-61 Wall-associated kinase 2 putative
blastp_kegg lcl|vvi:100257383 14 292 + 279 Gaps:11 37.85 745 47.52 1e-60 wall-associated receptor kinase 2-like
blastp_kegg lcl|vvi:100247712 37 292 + 256 Gaps:13 34.64 713 46.96 2e-59 wall-associated receptor kinase 2-like
blastp_kegg lcl|vvi:100252247 37 292 + 256 Gaps:17 30.85 820 49.01 4e-58 wall-associated receptor kinase 3-like
blastp_uniprot_sprot sp|Q9LMP1|WAK2_ARATH 10 292 + 283 Gaps:27 37.43 732 40.15 7e-48 Wall-associated receptor kinase 2 OS Arabidopsis thaliana GN WAK2 PE 1 SV 1
blastp_uniprot_sprot sp|Q39191|WAK1_ARATH 28 292 + 265 Gaps:24 34.69 735 38.04 1e-35 Wall-associated receptor kinase 1 OS Arabidopsis thaliana GN WAK1 PE 1 SV 2
blastp_uniprot_sprot sp|Q9LMN7|WAK5_ARATH 8 292 + 285 Gaps:33 37.93 733 37.05 6e-35 Wall-associated receptor kinase 5 OS Arabidopsis thaliana GN WAK5 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LMN8|WAK3_ARATH 10 292 + 283 Gaps:38 39.00 741 33.22 6e-32 Wall-associated receptor kinase 3 OS Arabidopsis thaliana GN WAK3 PE 2 SV 2
blastp_uniprot_sprot sp|Q9LMN6|WAK4_ARATH 8 292 + 285 Gaps:31 37.67 738 36.33 5e-30 Wall-associated receptor kinase 4 OS Arabidopsis thaliana GN WAK4 PE 2 SV 1
blastp_uniprot_sprot sp|Q7X8C5|WAKLB_ARATH 15 291 + 277 Gaps:31 38.24 748 30.77 5e-18 Wall-associated receptor kinase-like 2 OS Arabidopsis thaliana GN WAKL2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SA25|WAKLG_ARATH 5 292 + 288 Gaps:38 39.17 720 31.56 1e-17 Wall-associated receptor kinase-like 8 OS Arabidopsis thaliana GN WAKL8 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LN59|WAKLK_ARATH 24 292 + 269 Gaps:69 40.10 788 28.80 2e-17 Putative wall-associated receptor kinase-like 11 OS Arabidopsis thaliana GN WAKL11 PE 3 SV 2
blastp_uniprot_sprot sp|Q9M092|WAKLM_ARATH 24 292 + 269 Gaps:65 39.19 786 27.92 1e-13 Wall-associated receptor kinase-like 17 OS Arabidopsis thaliana GN WAKL17 PE 3 SV 2
blastp_uniprot_sprot sp|Q8VYA3|WAKLJ_ARATH 31 292 + 262 Gaps:78 38.75 769 28.86 6e-13 Wall-associated receptor kinase-like 10 OS Arabidopsis thaliana GN WAKL10 PE 2 SV 1
rpsblast_cdd gnl|CDD|206118 32 137 + 106 Gaps:4 98.11 106 37.50 3e-24 pfam13947 GUB_WAK_bind Wall-associated receptor kinase galacturonan-binding. This cysteine-rich GUB_WAK_bind domain is the extracellular part of this serine/threonine kinase that binds to the cell-wall pectins.

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 23 352 330 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 19 22 4 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 1 22 22 SIGNAL_PEPTIDE none Signal peptide region none
Phobius 3 18 16 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Pfam 31 137 107 PF13947 none Wall-associated receptor kinase galacturonan-binding IPR025287
Phobius 1 2 2 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none

3 Localization

Analysis Start End Length
SignalP_GRAM_POSITIVE 1 22 21
SignalP_GRAM_NEGATIVE 1 22 21
SignalP_EUK 1 26 25

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 26   Secretory pathway 1 0.889 0.023 NON-PLANT 26