Protein : Qrob_P0144360.2 Q. robur
Protein Identifier  ? Qrob_P0144360.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=3) KOG2811 - Uncharacterized conserved protein [Function unknown]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 223  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0008168 methyltransferase activity Catalysis of the transfer of a methyl group to an acceptor molecule.
GO:0008033 tRNA processing The process in which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group.

12 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103327274 96 222 + 127 Gaps:6 26.51 464 64.23 1e-39 tRNA:m(4)X modification enzyme TRM13 homolog
blastp_kegg lcl|mdm:103444409 126 222 + 97 Gaps:1 41.74 230 73.96 2e-39 tRNA:m(4)X modification enzyme TRM13 homolog
blastp_kegg lcl|pper:PRUPE_ppa005383mg 96 222 + 127 Gaps:6 26.51 464 64.23 4e-39 hypothetical protein
blastp_kegg lcl|mdm:103421931 126 222 + 97 Gaps:1 20.78 462 73.96 2e-37 tRNA:m(4)X modification enzyme TRM13 homolog
blastp_kegg lcl|pxb:103964908 126 222 + 97 Gaps:1 20.78 462 73.96 4e-37 tRNA:m(4)X modification enzyme TRM13 homolog
blastp_kegg lcl|pxb:103953085 126 222 + 97 Gaps:1 20.78 462 73.96 4e-37 tRNA:m(4)X modification enzyme TRM13 homolog
blastp_kegg lcl|rcu:RCOM_1344230 98 222 + 125 Gaps:9 27.85 438 57.38 5e-35 hypothetical protein
blastp_kegg lcl|fve:101314697 136 222 + 87 Gaps:1 18.86 456 73.26 8e-35 tRNA guanosine-2'-O-methyltransferase TRM13 homolog
blastp_kegg lcl|pop:POPTR_0002s19050g 95 222 + 128 Gaps:4 27.74 447 54.03 3e-34 POPTRDRAFT_711436 hypothetical protein
blastp_kegg lcl|tcc:TCM_004906 126 222 + 97 Gaps:2 21.62 458 66.67 9e-34 Methyltransferases isoform 1
rpsblast_cdd gnl|CDD|147414 126 222 + 97 Gaps:11 34.38 256 34.09 8e-16 pfam05206 TRM13 Methyltransferase TRM13. This is a family of eukaryotic proteins which are responsible for 2'-O-methylation of tRNA at position 4. TRM13 shows no sequence similarity to other known methyltransferases.
rpsblast_kog gnl|CDD|38022 137 221 + 85 Gaps:14 17.38 420 38.36 9e-10 KOG2811 KOG2811 KOG2811 Uncharacterized conserved protein [Function unknown].

3 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 129 221 93 PTHR12998 none none none
Pfam 126 221 96 PF05206 "MetaCyc:PWY-6829" Methyltransferase TRM13 IPR007871
PANTHER 129 221 93 PTHR12998:SF0 none none none

0 Localization

2 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2002_QTL17_peak_Bud_burst_A4 Qrob_Chr12 12 s_1CTJ3J_556 s_1CTJ3J_556 0 0 25 lod 2,9 6
Bourran2_2014_nSeqBC_3P Qrob_Chr12 12 s_1EO8V5_710 s_1A2VMU_355 11,04 0 32,58 lod 1,7196 4,7

0 Targeting