Protein : Qrob_P0142730.2 Q. robur
Protein Identifier  ? Qrob_P0142730.2 Organism . Name  Quercus robur
Protein Description  (M=2) PTHR10438:SF245 - THIOREDOXIN-LIKE 1-1, CHLOROPLASTIC-RELATED (PTHR10438:SF245) Alias (in v1)  Qrob_P0060470.1
Code Enzyme  EC:5.3.4.1 Gene Prediction Quality  manual_v1
Protein length 

Sequence

Length: 274  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0015035 protein disulfide oxidoreductase activity Catalysis of the reaction: a protein with reduced sulfide groups = a protein with oxidized disulfide bonds.
GO:0045454 cell redox homeostasis Any process that maintains the redox environment of a cell or compartment within a cell.
GO:0006662 glycerol ether metabolic process The chemical reactions and pathways involving glycerol ethers, any anhydride formed between two organic hydroxy compounds, one of which is glycerol.

39 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa009711mg 1 270 + 270 Gaps:7 97.86 281 65.82 1e-124 hypothetical protein
blastp_kegg lcl|pxb:103931324 12 270 + 259 Gaps:6 92.23 283 66.67 4e-122 thioredoxin-like 1-2 chloroplastic
blastp_kegg lcl|pmum:103338492 1 270 + 270 Gaps:7 97.86 281 64.00 1e-121 thioredoxin-like 1-2 chloroplastic
blastp_kegg lcl|pxb:103958700 12 270 + 259 Gaps:3 92.14 280 67.44 2e-120 thioredoxin-like 1-2 chloroplastic
blastp_kegg lcl|fve:101300345 32 270 + 239 Gaps:6 89.51 267 72.38 2e-118 thioredoxin-like 1-2 chloroplastic-like
blastp_kegg lcl|tcc:TCM_014055 1 270 + 270 Gaps:8 98.56 278 64.60 8e-118 Thioredoxin II putative
blastp_kegg lcl|cic:CICLE_v10021497mg 1 270 + 270 Gaps:15 98.61 287 64.66 2e-117 hypothetical protein
blastp_kegg lcl|mdm:103415280 12 270 + 259 Gaps:6 92.23 283 67.05 2e-117 thioredoxin-like 1-2 chloroplastic
blastp_kegg lcl|mdm:103455366 12 270 + 259 Gaps:6 92.23 283 67.05 2e-117 thioredoxin-like 1-2 chloroplastic
blastp_kegg lcl|mdm:103437831 12 270 + 259 Gaps:2 92.17 281 66.41 2e-117 thioredoxin-like 1-2 chloroplastic
blastp_pdb 2hsy_A 98 195 + 98 Gaps:1 93.27 104 32.99 4e-12 mol:protein length:104 Thioredoxin II
blastp_pdb 2fa4_B 98 195 + 98 Gaps:1 87.39 111 32.99 5e-12 mol:protein length:111 Thioredoxin II
blastp_pdb 2fa4_A 98 195 + 98 Gaps:1 87.39 111 32.99 5e-12 mol:protein length:111 Thioredoxin II
blastp_pdb 4dss_B 98 195 + 98 Gaps:1 86.61 112 31.96 5e-11 mol:protein length:112 Thioredoxin-2
blastp_pdb 3pin_A 98 195 + 98 Gaps:1 93.27 104 31.96 5e-11 mol:protein length:104 Thioredoxin-2
blastp_pdb 1trw_A 100 190 + 91 Gaps:1 85.71 105 32.22 6e-11 mol:protein length:105 THIOREDOXIN
blastp_pdb 1trv_A 100 190 + 91 Gaps:1 85.71 105 32.22 6e-11 mol:protein length:105 THIOREDOXIN
blastp_pdb 1tru_A 100 190 + 91 Gaps:1 85.71 105 32.22 6e-11 mol:protein length:105 THIOREDOXIN
blastp_pdb 1trs_A 100 190 + 91 Gaps:1 85.71 105 32.22 6e-11 mol:protein length:105 THIOREDOXIN
blastp_pdb 3m9k_B 100 190 + 91 Gaps:1 85.71 105 32.22 1e-10 mol:protein length:105 Thioredoxin
blastp_uniprot_sprot sp|Q9XFI1|TRL12_ARATH 32 230 + 199 none 81.22 245 58.29 5e-80 Thioredoxin-like 1-2 chloroplastic OS Arabidopsis thaliana GN At5g61440 PE 2 SV 1
blastp_uniprot_sprot sp|Q6Z4N3|TRL11_ORYSJ 69 225 + 157 none 56.27 279 68.15 1e-77 Thioredoxin-like 1-1 chloroplastic OS Oryza sativa subsp. japonica GN Os07g0684100 PE 2 SV 1
blastp_uniprot_sprot sp|Q10M18|TRL12_ORYSJ 48 255 + 208 Gaps:11 74.19 279 56.04 2e-76 Thioredoxin-like 1-2 chloroplastic OS Oryza sativa subsp. japonica GN Os03g0326500 PE 2 SV 1
blastp_uniprot_sprot sp|O64654|TRL11_ARATH 61 246 + 186 Gaps:3 68.73 275 58.73 1e-74 Thioredoxin-like 1-1 chloroplastic OS Arabidopsis thaliana GN At1g08570 PE 2 SV 1
blastp_uniprot_sprot sp|O22779|TRL13_ARATH 78 249 + 172 Gaps:3 64.10 273 55.43 1e-64 Thioredoxin-like 1-3 chloroplastic OS Arabidopsis thaliana GN At2g33270 PE 2 SV 1
blastp_uniprot_sprot sp|Q5TKD8|TRL2_ORYSJ 84 218 + 135 none 62.50 216 51.85 2e-46 Thioredoxin-like 2 chloroplastic OS Oryza sativa subsp. japonica GN Os05g0200100 PE 2 SV 1
blastp_uniprot_sprot sp|Q8LEK4|TRL21_ARATH 78 204 + 127 none 57.47 221 46.46 6e-39 Thioredoxin-like 2-1 chloroplastic OS Arabidopsis thaliana GN At4g26160 PE 2 SV 2
blastp_uniprot_sprot sp|Q8LCT3|TRL22_ARATH 88 195 + 108 Gaps:1 45.34 236 55.14 8e-35 Thioredoxin-like 2-2 chloroplastic OS Arabidopsis thaliana GN At4g29670 PE 2 SV 2
blastp_uniprot_sprot sp|O96952|THIO_GEOCY 110 177 + 68 none 64.15 106 36.76 1e-11 Thioredoxin OS Geodia cydonium GN THIO PE 3 SV 1
blastp_uniprot_sprot sp|P22803|TRX2_YEAST 98 195 + 98 Gaps:1 93.27 104 32.99 1e-11 Thioredoxin-2 OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN TRX2 PE 1 SV 3

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 89 204 116 SSF52833 none none IPR012336
ProSiteProfiles 47 232 186 PS51352 none Thioredoxin domain profile. IPR012336
PANTHER 68 231 164 PTHR10438:SF245 none none none
Gene3D 97 200 104 G3DSA:3.40.30.10 none none IPR012336
PANTHER 68 231 164 PTHR10438 none none IPR005746
Pfam 108 180 73 PF00085 none Thioredoxin IPR013766

0 Localization

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL5_peak_Bud_burst_A4 Qrob_Chr10 10 s_1C8OKQ_688 v_12844_707 25,6 13,9 39,9 lod 2,7 6,1
Bourran2_2002_QTL13_peak_Bud_burst_3P Qrob_Chr10 10 s_1B1AG7_637 s_1A3A1N_709 19,44 0 49,44 lod 3 5,6
Bourran2_2002_QTL15_peak_Bud_burst_A4 Qrob_Chr10 10 v_7579_71 s_1ATZMJ_189 23,94 0 43,64 lod 3,7 5,4
Bourran2_2014_vSeqBC_3P Qrob_Chr10 10 s_1A6CK6_610 v_7092_29 4,28 0 23,27 lod 2,8619 7
Bourran2_2014_vSeqBC_A4 Qrob_Chr10 10 s_1BAM4E_1326 s_1C0HD0_1012 36,88 7,71 46,03 lod 2,6164 7,3
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
PM_1999_QTL16_peak_Bud_burst_3P Qrob_Chr10 10 s_1B6YNI_505 s_1A1ZO_1322 7,48 0 31,48 lod 4 7,1

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 31   Mitochondrion 5 0.102 0.433 NON-PLANT 31