Protein : Qrob_P0142720.2 Q. robur
Protein Identifier  ? Qrob_P0142720.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) PTHR12561 - LIPOATE-PROTEIN LIGASE Gene Prediction Quality  validated
Protein length 

Sequence

Length: 270  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0006464 cellular protein modification process The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications) occurring at the level of an individual cell. Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification).

34 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|mdm:103437830 1 269 + 269 Gaps:2 98.91 274 75.28 5e-151 putative lipoate-protein ligase A
blastp_kegg lcl|pxb:103931360 7 269 + 263 none 95.99 274 75.29 1e-150 putative lipoate-protein ligase A
blastp_kegg lcl|pper:PRUPE_ppa009955mg 6 269 + 264 Gaps:1 97.41 270 75.67 1e-149 hypothetical protein
blastp_kegg lcl|pmum:103338497 1 269 + 269 Gaps:3 100.00 270 73.33 8e-146 putative lipoate-protein ligase A
blastp_kegg lcl|vvi:100245023 7 267 + 261 Gaps:1 97.01 268 75.38 8e-146 probable lipoate-protein ligase A-like
blastp_kegg lcl|pxb:103958704 7 257 + 251 none 95.80 262 76.89 6e-145 putative lipoate-protein ligase A
blastp_kegg lcl|tcc:TCM_014047 7 250 + 244 none 94.21 259 79.10 2e-143 Biotin/lipoate A/B protein ligase family
blastp_kegg lcl|fve:101301137 1 269 + 269 Gaps:7 100.00 266 72.56 8e-138 uncharacterized protein LOC101301137
blastp_kegg lcl|rcu:RCOM_0340100 6 252 + 247 none 92.51 267 73.68 7e-136 lipoate-protein ligase putative
blastp_kegg lcl|cmo:103486730 7 259 + 253 Gaps:1 92.99 271 73.81 9e-136 putative lipoate-protein ligase A
blastp_pdb 1vqz_A 48 237 + 190 Gaps:19 57.77 341 26.40 3e-09 mol:protein length:341 lipoate-protein ligase putative
blastp_pdb 3a7r_A 48 181 + 134 Gaps:11 38.87 337 30.53 5e-07 mol:protein length:337 Lipoate-protein ligase A
blastp_pdb 3a7a_C 48 181 + 134 Gaps:11 38.87 337 30.53 5e-07 mol:protein length:337 Lipoate-protein ligase A
blastp_pdb 3a7a_A 48 181 + 134 Gaps:11 38.87 337 30.53 5e-07 mol:protein length:337 Lipoate-protein ligase A
blastp_pdb 1x2h_C 48 181 + 134 Gaps:11 38.87 337 30.53 5e-07 mol:protein length:337 Lipoate-protein ligase A
blastp_pdb 1x2h_B 48 181 + 134 Gaps:11 38.87 337 30.53 5e-07 mol:protein length:337 Lipoate-protein ligase A
blastp_pdb 1x2h_A 48 181 + 134 Gaps:11 38.87 337 30.53 5e-07 mol:protein length:337 Lipoate-protein ligase A
blastp_pdb 1x2g_C 48 181 + 134 Gaps:11 38.87 337 30.53 5e-07 mol:protein length:337 Lipoate-protein ligase A
blastp_pdb 1x2g_B 48 181 + 134 Gaps:11 38.87 337 30.53 5e-07 mol:protein length:337 Lipoate-protein ligase A
blastp_pdb 1x2g_A 48 181 + 134 Gaps:11 38.87 337 30.53 5e-07 mol:protein length:337 Lipoate-protein ligase A
blastp_uniprot_sprot sp|O07608|LPLJ_BACSU 47 167 + 121 Gaps:8 35.35 331 32.48 2e-08 Lipoate-protein ligase LplJ OS Bacillus subtilis (strain 168) GN lplJ PE 1 SV 1
blastp_uniprot_sprot sp|P47512|LPLA_MYCGE 28 203 + 176 Gaps:12 52.38 336 27.84 4e-07 Probable lipoate-protein ligase A OS Mycoplasma genitalium (strain ATCC 33530 / G-37 / NCTC 10195) GN lplA PE 3 SV 1
blastp_uniprot_sprot sp|Q1QEC2|LPLA_PSYCK 48 225 + 178 Gaps:17 51.03 339 26.59 1e-06 Lipoate-protein ligase A OS Psychrobacter cryohalolentis (strain K5) GN lplA PE 3 SV 1
blastp_uniprot_sprot sp|Q327K9|LPLA_SHIDS 48 181 + 134 Gaps:11 38.76 338 30.53 1e-06 Lipoate-protein ligase A OS Shigella dysenteriae serotype 1 (strain Sd197) GN lplA PE 3 SV 1
blastp_uniprot_sprot sp|B7NW66|LPLA_ECO7I 48 181 + 134 Gaps:11 38.76 338 30.53 1e-06 Lipoate-protein ligase A OS Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN lplA PE 3 SV 1
blastp_uniprot_sprot sp|O13629|LPLA_SCHPO 8 170 + 163 Gaps:20 43.25 363 28.03 1e-06 Putative lipoate-protein ligase A OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN aim22 PE 3 SV 1
blastp_uniprot_sprot sp|A4W6A2|LPLA_ENT38 48 181 + 134 Gaps:15 38.76 338 32.06 2e-06 Lipoate-protein ligase A OS Enterobacter sp. (strain 638) GN lplA PE 3 SV 1
blastp_uniprot_sprot sp|B1LEJ1|LPLA_ECOSM 48 181 + 134 Gaps:11 38.76 338 30.53 2e-06 Lipoate-protein ligase A OS Escherichia coli (strain SMS-3-5 / SECEC) GN lplA PE 3 SV 1
blastp_uniprot_sprot sp|B7NH54|LPLA_ECOLU 48 181 + 134 Gaps:11 38.76 338 30.53 2e-06 Lipoate-protein ligase A OS Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN lplA PE 3 SV 1
blastp_uniprot_sprot sp|B7LNS6|LPLA_ESCF3 48 181 + 134 Gaps:11 38.76 338 30.53 2e-06 Lipoate-protein ligase A OS Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN lplA PE 3 SV 1

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 72 167 96 PF03099 "KEGG:00785+2.3.1.181","MetaCyc:PWY-6987","MetaCyc:PWY-7381" Biotin/lipoate A/B protein ligase family IPR004143
ProSiteProfiles 37 223 187 PS51733 "KEGG:00785+2.3.1.181","MetaCyc:PWY-6987","MetaCyc:PWY-7381" Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) catalytic domain profile. IPR004143
PANTHER 9 251 243 PTHR12561 none none none
SUPERFAMILY 11 226 216 SSF55681 none none none
Gene3D 10 230 221 G3DSA:3.90.1550.10 none none none

0 Localization

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL5_peak_Bud_burst_A4 Qrob_Chr10 10 s_1C8OKQ_688 v_12844_707 25,6 13,9 39,9 lod 2,7 6,1
Bourran2_2002_QTL13_peak_Bud_burst_3P Qrob_Chr10 10 s_1B1AG7_637 s_1A3A1N_709 19,44 0 49,44 lod 3 5,6
Bourran2_2002_QTL15_peak_Bud_burst_A4 Qrob_Chr10 10 v_7579_71 s_1ATZMJ_189 23,94 0 43,64 lod 3,7 5,4
Bourran2_2014_vSeqBC_3P Qrob_Chr10 10 s_1A6CK6_610 v_7092_29 4,28 0 23,27 lod 2,8619 7
Bourran2_2014_vSeqBC_A4 Qrob_Chr10 10 s_1BAM4E_1326 s_1C0HD0_1012 36,88 7,71 46,03 lod 2,6164 7,3
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
PM_1999_QTL16_peak_Bud_burst_3P Qrob_Chr10 10 s_1B6YNI_505 s_1A1ZO_1322 7,48 0 31,48 lod 4 7,1

0 Targeting