Protein : Qrob_P0142590.2 Q. robur
Protein Identifier  ? Qrob_P0142590.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=6) PTHR10177//PTHR10177:SF191 - CYCLINE // SUBFAMILY NOT NAMED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 172  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0005634 nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO:0051726 regulation of cell cycle Any process that modulates the rate or extent of progression through the cell cycle.

27 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|fve:101292695 4 152 + 149 Gaps:4 43.94 330 82.76 7e-71 cyclin-D1-1-like
blastp_kegg lcl|rcu:RCOM_0394330 4 152 + 149 Gaps:3 37.82 386 79.45 2e-69 cyclin d putative
blastp_kegg lcl|vvi:100255261 14 152 + 139 Gaps:3 41.98 324 84.56 2e-69 cyclin-D1-1-like
blastp_kegg lcl|pop:POPTR_0008s14600g 8 152 + 145 Gaps:4 43.60 328 81.82 6e-69 POPTRDRAFT_564776 cyclin delta-1 family protein
blastp_kegg lcl|csv:101210686 1 152 + 152 Gaps:4 44.78 335 76.67 2e-68 cyclin-D1-1-like
blastp_kegg lcl|pmum:103343592 7 152 + 146 Gaps:4 42.86 336 81.25 5e-68 cyclin-D1-1
blastp_kegg lcl|pper:PRUPE_ppa008337mg 7 154 + 148 Gaps:4 43.45 336 80.14 6e-68 hypothetical protein
blastp_kegg lcl|mdm:103451925 7 152 + 146 Gaps:4 41.89 339 80.99 9e-68 cyclin-D1-1-like
blastp_kegg lcl|pop:POPTR_0010s10520g 8 152 + 145 Gaps:4 43.73 327 79.72 1e-67 POPTRDRAFT_833548 cyclin delta-1 family protein
blastp_kegg lcl|cmo:103503316 1 152 + 152 Gaps:2 44.78 335 74.67 2e-67 cyclin-D1-1-like
blastp_uniprot_sprot sp|P42751|CCD11_ARATH 14 154 + 141 Gaps:3 40.71 339 71.74 6e-61 Cyclin-D1-1 OS Arabidopsis thaliana GN CYCD1-1 PE 1 SV 3
blastp_uniprot_sprot sp|Q0J233|CCD21_ORYSJ 1 149 + 149 Gaps:21 41.56 308 62.50 9e-40 Cyclin-D2-1 OS Oryza sativa subsp. japonica GN CYCD2-1 PE 3 SV 2
blastp_uniprot_sprot sp|Q8H339|CCD12_ORYSJ 46 149 + 104 Gaps:4 29.94 354 60.38 1e-30 Cyclin-D1-2 OS Oryza sativa subsp. japonica GN CYCD1-2 PE 3 SV 2
blastp_uniprot_sprot sp|Q6YXH8|CCD41_ORYSJ 38 171 + 134 Gaps:14 41.01 356 47.95 2e-27 Cyclin-D4-1 OS Oryza sativa subsp. japonica GN CYCD4-1 PE 2 SV 2
blastp_uniprot_sprot sp|Q4KYM5|CCD42_ORYSJ 44 171 + 128 Gaps:10 36.03 383 45.65 4e-27 Cyclin-D4-2 OS Oryza sativa subsp. japonica GN CYCD4-2 PE 2 SV 2
blastp_uniprot_sprot sp|Q8LHA8|CCD22_ORYSJ 44 154 + 111 none 31.18 356 49.55 5e-27 Cyclin-D2-2 OS Oryza sativa subsp. japonica GN CYCD2-2 PE 2 SV 1
blastp_uniprot_sprot sp|P42752|CCD21_ARATH 45 149 + 105 none 29.09 361 51.43 2e-26 Cyclin-D2-1 OS Arabidopsis thaliana GN CYCD2-1 PE 1 SV 3
blastp_uniprot_sprot sp|Q8LGA1|CCD41_ARATH 44 149 + 106 Gaps:1 34.74 308 50.47 1e-25 Cyclin-D4-1 OS Arabidopsis thaliana GN CYCD4-1 PE 1 SV 2
blastp_uniprot_sprot sp|Q0WQN9|CCD42_ARATH 44 150 + 107 none 35.91 298 50.47 2e-24 Cyclin-D4-2 OS Arabidopsis thaliana GN CYCD4-2 PE 1 SV 2
blastp_uniprot_sprot sp|Q10K98|CCD23_ORYSJ 45 171 + 127 Gaps:15 32.59 405 48.48 3e-23 Putative cyclin-D2-3 OS Oryza sativa subsp. japonica GN CYCD2-3 PE 3 SV 1
rpsblast_cdd gnl|CDD|201025 46 150 + 105 Gaps:5 78.74 127 35.00 6e-21 pfam00134 Cyclin_N Cyclin N-terminal domain. Cyclins regulate cyclin dependent kinases (CDKs). Human cyclin-O is a Uracil-DNA glycosylase that is related to other cyclins. Cyclins contain two domains of similar all-alpha fold of which this family corresponds with the N-terminal domain.
rpsblast_cdd gnl|CDD|197692 84 152 + 69 Gaps:3 79.52 83 30.30 4e-09 smart00385 CYCLIN domain present in cyclins TFIIB and Retinoblastoma. A helical domain present in cyclins and TFIIB (twice) and Retinoblastoma (once). A protein recognition domain functioning in cell-cycle and transcription control.
rpsblast_cdd gnl|CDD|34629 23 149 + 127 Gaps:6 27.95 440 30.08 2e-08 COG5024 COG5024 Cyclin [Cell division and chromosome partitioning].
rpsblast_cdd gnl|CDD|28924 78 149 + 72 Gaps:4 77.27 88 39.71 9e-08 cd00043 CYCLIN Cyclin box fold. Protein binding domain functioning in cell-cycle and transcription control. Present in cyclins TFIIB and Retinoblastoma (RB).The cyclins consist of 8 classes of cell cycle regulators that regulate cyclin dependent kinases (CDKs). TFIIB is a transcription factor that binds the TATA box. Cyclins TFIIB and RB contain 2 copies of the domain..
rpsblast_kog gnl|CDD|35875 7 162 + 156 Gaps:9 48.06 335 39.75 2e-34 KOG0656 KOG0656 KOG0656 G1/S-specific cyclin D [Cell cycle control cell division chromosome partitioning].
rpsblast_kog gnl|CDD|35872 21 148 + 128 Gaps:6 31.71 391 31.45 1e-10 KOG0653 KOG0653 KOG0653 Cyclin B and related kinase-activating proteins [Cell cycle control cell division chromosome partitioning].
rpsblast_kog gnl|CDD|35874 73 147 + 75 Gaps:2 17.89 408 34.25 1e-06 KOG0655 KOG0655 KOG0655 G1/S-specific cyclin E [Cell cycle control cell division chromosome partitioning].

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SMART 83 170 88 SM00385 none domain present in cyclins, TFIIB and Retinoblastoma IPR013763
Pfam 47 152 106 PF00134 none Cyclin, N-terminal domain IPR006671
SUPERFAMILY 38 151 114 SSF47954 none none IPR013763
Gene3D 69 152 84 G3DSA:1.10.472.10 none none IPR013763
PANTHER 32 148 117 PTHR10177:SF191 none none IPR031093
PANTHER 32 148 117 PTHR10177 none none none
ProSitePatterns 78 109 32 PS00292 none Cyclins signature. IPR006671

0 Localization

0 Qtllist

0 Targeting