Protein : Qrob_P0139530.2 Q. robur
Protein Identifier  ? Qrob_P0139530.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR11564:SF15 - CELL DIVISION PROTEIN FTSY HOMOLOG, CHLOROPLASTIC (PTHR11564:SF15) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 91  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0005525 GTP binding Interacting selectively and non-covalently with GTP, guanosine triphosphate.
GO:0006614 SRP-dependent cotranslational protein targeting to membrane The targeting of proteins to a membrane that occurs during translation and is dependent upon two key components, the signal-recognition particle (SRP) and the SRP receptor. SRP is a cytosolic particle that transiently binds to the endoplasmic reticulum (ER) signal sequence in a nascent protein, to the large ribosomal unit, and to the SRP receptor in the ER membrane.

42 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_1614410 15 86 + 72 none 19.89 362 95.83 2e-38 cell division protein ftsy putative
blastp_kegg lcl|cic:CICLE_v10020663mg 15 86 + 72 none 24.66 292 95.83 4e-38 hypothetical protein
blastp_kegg lcl|pop:POPTR_0014s07480g 15 86 + 72 none 19.73 365 94.44 7e-38 POPTRDRAFT_572201 signal recognition particle receptor family protein
blastp_kegg lcl|gmx:100791073 15 86 + 72 none 19.35 372 94.44 8e-38 cell division protein FtsY homolog chloroplastic-like
blastp_kegg lcl|tcc:TCM_005404 15 86 + 72 none 16.18 445 94.44 1e-37 Signal recognition particle receptor protein isoform 1
blastp_kegg lcl|cit:102629533 15 86 + 72 none 19.35 372 95.83 2e-37 cell division protein FtsY homolog chloroplastic-like
blastp_kegg lcl|pvu:PHAVU_010G093600g 15 86 + 72 none 19.41 371 91.67 8e-37 hypothetical protein
blastp_kegg lcl|csv:101205155 15 86 + 72 none 19.57 368 91.67 1e-36 cell division protein FtsY homolog chloroplastic-like
blastp_kegg lcl|pmum:103331861 15 86 + 72 none 19.20 375 93.06 1e-36 cell division protein FtsY homolog chloroplastic
blastp_kegg lcl|gmx:100809203 15 86 + 72 none 19.35 372 93.06 1e-36 cell division protein FtsY homolog chloroplastic-like
blastp_pdb 3b9q_A 15 86 + 72 none 23.84 302 88.89 5e-38 mol:protein length:302 Chloroplast SRP receptor homolog alpha subun
blastp_pdb 2og2_A 15 86 + 72 none 20.06 359 88.89 1e-37 mol:protein length:359 Putative signal recognition particle receptor
blastp_pdb 2qy9_A 1 75 + 75 none 24.27 309 45.33 4e-19 mol:protein length:309 Cell division protein ftsY
blastp_pdb 2xxa_D 1 75 + 75 none 24.83 302 45.33 4e-19 mol:protein length:302 SRP RECEPTOR FTSY
blastp_pdb 2xxa_B 1 75 + 75 none 24.83 302 45.33 4e-19 mol:protein length:302 SRP RECEPTOR FTSY
blastp_pdb 1fts_A 1 75 + 75 none 25.42 295 45.33 4e-19 mol:protein length:295 FTSY
blastp_pdb 2yhs_A 1 75 + 75 none 14.91 503 45.33 9e-19 mol:protein length:503 CELL DIVISION PROTEIN FTSY
blastp_pdb 3e70_C 15 75 + 61 none 18.60 328 52.46 3e-14 mol:protein length:328 Signal recognition particle receptor
blastp_pdb 3dmd_C 15 75 + 61 none 18.60 328 52.46 3e-14 mol:protein length:328 Signal recognition particle receptor
blastp_pdb 3dmd_A 15 75 + 61 none 18.60 328 52.46 3e-14 mol:protein length:328 Signal recognition particle receptor
blastp_uniprot_sprot sp|O80842|CFTSY_ARATH 15 86 + 72 none 19.67 366 88.89 5e-37 Cell division protein FtsY homolog chloroplastic OS Arabidopsis thaliana GN CPFTSY PE 1 SV 2
blastp_uniprot_sprot sp|A9CHH2|FTSY_AGRT5 1 75 + 75 Gaps:8 17.36 478 51.81 3e-20 Signal recognition particle receptor FtsY OS Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN ftsY PE 3 SV 1
blastp_uniprot_sprot sp|O67066|FTSY_AQUAE 17 79 + 63 none 13.67 461 61.90 1e-19 Signal recognition particle receptor FtsY OS Aquifex aeolicus (strain VF5) GN ftsY PE 3 SV 1
blastp_uniprot_sprot sp|O32861|FTSY_MYCHP 6 86 + 81 none 23.08 351 49.38 3e-19 Signal recognition particle receptor FtsY OS Mycoplasma hominis (strain ATCC 23114 / NBRC 14850 / NCTC 10111 / PG21) GN ftsY PE 3 SV 1
blastp_uniprot_sprot sp|P51835|FTSY_BACSU 18 75 + 58 none 17.63 329 58.62 1e-18 Signal recognition particle receptor FtsY OS Bacillus subtilis (strain 168) GN ftsY PE 1 SV 2
blastp_uniprot_sprot sp|P10121|FTSY_ECOLI 1 75 + 75 none 15.09 497 45.33 3e-18 Signal recognition particle receptor FtsY OS Escherichia coli (strain K12) GN ftsY PE 1 SV 1
blastp_uniprot_sprot sp|D3UJA7|FTSY_HELM1 15 78 + 64 none 21.92 292 54.69 4e-18 Signal recognition particle receptor FtsY OS Helicobacter mustelae (strain ATCC 43772 / LMG 18044 / NCTC 12198 / 12198) GN ftsY PE 3 SV 1
blastp_uniprot_sprot sp|Q726P7|FTSY_DESVH 16 72 + 57 none 11.68 488 64.91 9e-18 Signal recognition particle receptor FtsY OS Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN ftsY PE 3 SV 1
blastp_uniprot_sprot sp|P44870|FTSY_HAEIN 15 85 + 71 none 17.15 414 50.70 1e-16 Signal recognition particle receptor FtsY OS Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN ftsY PE 3 SV 1
blastp_uniprot_sprot sp|P57010|FTSY_NEIMA 11 75 + 65 none 15.44 421 49.23 4e-16 Signal recognition particle receptor FtsY OS Neisseria meningitidis serogroup A / serotype 4A (strain Z2491) GN ftsY PE 3 SV 1

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 14 78 65 SSF52540 none none IPR027417
PANTHER 1 86 86 PTHR11564:SF15 none none none
SMART 16 90 75 SM00962 "Reactome:REACT_15380" SRP54-type protein, GTPase domain IPR000897
PANTHER 1 86 86 PTHR11564 none none none
Gene3D 11 82 72 G3DSA:3.40.50.300 none none IPR027417
Pfam 16 82 67 PF00448 "Reactome:REACT_15380" SRP54-type protein, GTPase domain IPR000897

0 Localization

9 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nPriLBD_A4 Qrob_Chr08 8 PIE175 v_9164_159 31,85 15,39 48,29 lod 2,8308 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04

0 Targeting