Protein : Qrob_P0138990.2 Q. robur
Protein Identifier  ? Qrob_P0138990.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) K03241 - translation initiation factor eIF-2B gamma subunit Gene Prediction Quality  validated
Protein length 

Sequence

Length: 460  
Kegg Orthology  K03241
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

2 GO Terms

Identifier Name Description
GO:0009058 biosynthetic process The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
GO:0016779 nucleotidyltransferase activity Catalysis of the transfer of a nucleotidyl group to a reactant.

34 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103326903 1 459 + 459 Gaps:5 100.00 464 88.15 0.0 translation initiation factor eIF-2B subunit gamma
blastp_kegg lcl|pper:PRUPE_ppa005429mg 1 459 + 459 Gaps:2 100.00 461 88.29 0.0 hypothetical protein
blastp_kegg lcl|pxb:103936886 1 459 + 459 Gaps:3 100.00 460 87.39 0.0 translation initiation factor eIF-2B subunit gamma-like
blastp_kegg lcl|pxb:103942203 1 459 + 459 Gaps:3 100.00 460 86.52 0.0 translation initiation factor eIF-2B subunit gamma-like
blastp_kegg lcl|mdm:103426079 1 459 + 459 Gaps:3 100.00 460 86.74 0.0 translation initiation factor eIF-2B subunit gamma
blastp_kegg lcl|gmx:100799460 1 457 + 457 Gaps:2 100.00 459 83.66 0.0 translation initiation factor eIF-2B subunit gamma-like
blastp_kegg lcl|cam:101508686 1 457 + 457 Gaps:2 99.57 461 83.66 0.0 translation initiation factor eIF-2B subunit gamma-like
blastp_kegg lcl|pvu:PHAVU_002G235800g 1 457 + 457 Gaps:2 100.00 459 82.57 0.0 hypothetical protein
blastp_kegg lcl|gmx:100783346 1 457 + 457 Gaps:11 100.00 468 82.05 0.0 translation initiation factor eIF-2B subunit gamma-like
blastp_kegg lcl|pop:POPTR_0009s07080g 1 457 + 457 Gaps:3 100.00 458 82.53 0.0 POPTRDRAFT_821380 hypothetical protein
blastp_uniprot_sprot sp|Q54FQ8|EI2BG_DICDI 3 427 + 425 Gaps:30 96.14 440 32.86 1e-66 Translation initiation factor eIF-2B subunit gamma OS Dictyostelium discoideum GN eif2b3 PE 3 SV 1
blastp_uniprot_sprot sp|P70541|EI2BG_RAT 1 445 + 445 Gaps:43 96.02 452 33.18 2e-58 Translation initiation factor eIF-2B subunit gamma OS Rattus norvegicus GN Eif2b3 PE 2 SV 2
blastp_uniprot_sprot sp|Q4R6T3|EI2BG_MACFA 1 440 + 440 Gaps:39 94.91 452 32.17 4e-55 Translation initiation factor eIF-2B subunit gamma OS Macaca fascicularis GN EIF2B3 PE 2 SV 1
blastp_uniprot_sprot sp|A5PJI7|EI2BG_BOVIN 1 440 + 440 Gaps:42 95.13 452 32.09 7e-55 Translation initiation factor eIF-2B subunit gamma OS Bos taurus GN EIF2B3 PE 2 SV 1
blastp_uniprot_sprot sp|Q9NR50|EI2BG_HUMAN 1 440 + 440 Gaps:39 94.91 452 31.93 1e-53 Translation initiation factor eIF-2B subunit gamma OS Homo sapiens GN EIF2B3 PE 1 SV 1
blastp_uniprot_sprot sp|P56288|EI2BG_SCHPO 1 459 + 459 Gaps:51 90.83 458 29.81 8e-47 Probable translation initiation factor eIF-2B subunit gamma OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN tif223 PE 1 SV 2
blastp_uniprot_sprot sp|P80361|EI2BG_CAEEL 5 438 + 434 Gaps:77 91.83 404 28.57 1e-21 Probable translation initiation factor eIF-2B subunit gamma OS Caenorhabditis elegans GN ppp-1 PE 2 SV 3
blastp_uniprot_sprot sp|P09032|EI2BG_YEAST 21 455 + 435 Gaps:75 79.58 578 23.48 1e-16 Translation initiation factor eIF-2B subunit gamma OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN GCD1 PE 1 SV 3
blastp_uniprot_sprot sp|Q13144|EI2BE_HUMAN 3 433 + 431 Gaps:103 53.26 721 24.48 3e-15 Translation initiation factor eIF-2B subunit epsilon OS Homo sapiens GN EIF2B5 PE 1 SV 3
blastp_uniprot_sprot sp|Q8CHW4|EI2BE_MOUSE 3 433 + 431 Gaps:71 53.56 717 25.26 7e-15 Translation initiation factor eIF-2B subunit epsilon OS Mus musculus GN Eif2b5 PE 1 SV 1
rpsblast_cdd gnl|CDD|133041 3 220 + 218 Gaps:8 100.00 214 40.65 1e-54 cd04198 eIF-2B_gamma_N The N-terminal domain of gamma subunit of the eIF-2B is a subfamily of glycosyltransferase 2. N-terminal domain of gamma subunit of the eukaryotic translation initiation factor 2B (eIF-2B): eIF-2B is a guanine nucleotide-exchange factor which mediates the exchange of GDP (bound to initiation factor eIF2) for GTP generating active eIF2.GTP complex. EIF2B is a complex multimeric protein consisting of five subunits named alpha beta gamma delta and epsilon. Subunit gamma shares sequence similarity with epsilon subunit and with a family of bifunctional nucleotide-binding enzymes such as ADP-glucose pyrophosphorylase suggesting that epsilon subunit may play roles in nucleotide binding activity. In yeast eIF2B gamma enhances the activity of eIF2B-epsilon leading to the idea that these subunits form the catalytic subcomplex.
rpsblast_cdd gnl|CDD|133001 3 220 + 218 Gaps:22 100.00 216 32.41 4e-41 cd02507 eIF-2B_gamma_N_like The N-terminal of eIF-2B_gamma_like is predicted to have glycosyltransferase activity. N-terminal domain of eEIF-2B epsilon and gamma subunits of eukaryotic translation initiators is a subfamily of glycosyltranferase 2 and is predicted to have glycosyltranferase activity. eIF-2B is a guanine nucleotide-exchange factor which mediates the exchange of GDP (bound to initiation factor eIF2) for GTP generating active eIF2.GTP complex. EIF2B is a complex multimeric protein consisting of five subunits named alpha beta gamma delta and epsilon. Subunit epsilon shares sequence similarity with gamma subunit and with a family of bifunctional nucleotide-binding enzymes such as ADP-glucose pyrophosphorylase suggesting that epsilon subunit may play roles in nucleotide binding activity. In yeast eIF2B gamma enhances the activity of eIF2B-epsilon leading to the idea that these subunits form the catalytic subcomplex.
rpsblast_cdd gnl|CDD|31401 4 447 + 444 Gaps:95 99.44 358 28.37 7e-31 COG1208 GCD1 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) [Cell envelope biogenesis outer membrane / Translation ribosomal structure and biogenesis].
rpsblast_cdd gnl|CDD|100057 368 447 + 80 none 98.77 81 48.75 1e-28 cd04652 LbH_eIF2B_gamma_C eIF-2B gamma subunit C-terminal Left-handed parallel beta-Helix (LbH) domain: eIF-2B is a eukaryotic translation initiator a guanine nucleotide exchange factor (GEF) composed of five different subunits (alpha beta gamma delta and epsilon). eIF2B is important for regenerating GTP-bound eIF2 during the initiation process. This event is obligatory for eIF2 to bind initiator methionyl-tRNA forming the ternary initiation complex. The eIF-2B gamma subunit contains an N-terminal domain that resembles a dinucleotide-binding Rossmann fold and a C-terminal LbH domain with 4 turns each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). The epsilon and gamma subunits form the catalytic subcomplex of eIF-2B which binds eIF2 and catalyzes guanine nucleotide exchange..
rpsblast_cdd gnl|CDD|133024 5 244 + 240 Gaps:39 92.63 217 28.86 3e-20 cd04181 NTP_transferase NTP_transferases catalyze the transfer of nucleotides onto phosphosugars. Nucleotidyltransferases transfer nucleotides onto phosphosugars. The enzyme family includes Alpha-D-Glucose-1-Phosphate Cytidylyltransferase Mannose-1-phosphate guanyltransferase and Glucose-1-phosphate thymidylyltransferase. The products are activated sugars that are precursors for synthesis of lipopolysaccharide glycolipids and polysaccharides.
rpsblast_cdd gnl|CDD|100046 369 437 + 69 none 87.34 79 36.23 2e-17 cd03356 LbH_G1P_AT_C_like Left-handed parallel beta-Helix (LbH) domain of a group of proteins with similarity to glucose-1-phosphate adenylyltransferase: Included in this family are glucose-1-phosphate adenylyltransferase mannose-1-phosphate guanylyltransferase and the eukaryotic translation initiation factor eIF-2B subunits epsilon and gamma. Most members of this family contains an N-terminal catalytic domain that resembles a dinucleotide-binding Rossmann fold followed by a LbH fold domain with at least 4 turns each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). eIF-2B epsilon contains an additional domain of unknown function at the C-terminus. Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity..
rpsblast_cdd gnl|CDD|133065 5 245 + 241 Gaps:42 89.24 223 30.65 3e-16 cd06915 NTP_transferase_WcbM_like WcbM_like is a subfamily of nucleotidyl transferases. WcbM protein of Burkholderia mallei is involved in the biosynthesis export or translocation of capsule. It is a subfamily of nucleotidyl transferases that transfer nucleotides onto phosphosugars.
rpsblast_cdd gnl|CDD|100061 369 446 + 78 Gaps:5 92.41 79 39.73 2e-15 cd05787 LbH_eIF2B_epsilon eIF-2B epsilon subunit central Left-handed parallel beta-Helix (LbH) domain: eIF-2B is a eukaryotic translation initiator a guanine nucleotide exchange factor (GEF) composed of five different subunits (alpha beta gamma delta and epsilon). eIF2B is important for regenerating GTP-bound eIF2 during the initiation process. This event is obligatory for eIF2 to bind initiator methionyl-tRNA forming the ternary initiation complex. The eIF-2B epsilon subunit contains an N-terminal domain that resembles a dinucleotide-binding Rossmann fold a central LbH domain containing 4 turns each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X) and a C-terminal domain of unknown function that is present in eIF-4 gamma eIF-5 and eIF-2B epsilon. The epsilon and gamma subunits form the catalytic subcomplex of eIF-2B which binds eIF2 and catalyzes guanine nucleotide exchange..
rpsblast_cdd gnl|CDD|179158 350 420 + 71 Gaps:3 21.57 343 35.14 4e-11 PRK00892 lpxD UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase Provisional.
rpsblast_cdd gnl|CDD|133044 7 141 + 135 Gaps:15 60.63 221 23.88 7e-11 cd06422 NTP_transferase_like_1 NTP_transferase_like_1 is a member of the nucleotidyl transferase family. This is a subfamily of nucleotidyl transferases. Nucleotidyl transferases transfer nucleotides onto phosphosugars. The activated sugars are precursors for synthesis of lipopolysaccharide glycolipids and polysaccharides. Other subfamilies of nucleotidyl transferases include Alpha-D-Glucose-1-Phosphate Cytidylyltransferase Mannose-1-phosphate guanyltransferase and Glucose-1-phosphate thymidylyltransferase.

15 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 333 452 120 G3DSA:2.160.10.10 none none none
PANTHER 1 140 140 PTHR22572:SF8 none none none
SUPERFAMILY 4 243 240 SSF53448 none none IPR029044
SUPERFAMILY 374 423 50 SSF53448 none none IPR029044
SUPERFAMILY 300 337 38 SSF53448 none none IPR029044
PANTHER 300 459 160 PTHR22572:SF8 none none none
PANTHER 300 459 160 PTHR22572 none none none
Pfam 366 399 34 PF00132 none Bacterial transferase hexapeptide (six repeats) IPR001451
Pfam 6 150 145 PF00483 "Reactome:REACT_17015" Nucleotidyl transferase IPR005835
PANTHER 1 140 140 PTHR22572 none none none
PANTHER 158 242 85 PTHR22572 none none none
PANTHER 158 242 85 PTHR22572:SF8 none none none
Gene3D 1 151 151 G3DSA:3.90.550.10 none none IPR029044
Gene3D 313 332 20 G3DSA:3.90.550.10 none none IPR029044
Gene3D 187 253 67 G3DSA:3.90.550.10 none none IPR029044

0 Localization

9 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL1_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AMVCC_444 s_1BE1VC_321 4 0 31 lod 3,2 7,4
Bourran2_2003_QTL8_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AH7I_610 s_1BE1VC_321 4,6 0 28 lod 3,5 7,4
Bourran2_2007_QTL6_peak_Bud_burst_3P Qrob_Chr01 1 s_1BE1VC_321 s_1A5JRZ_890 5 0 25 lod 2,4 6
Bourran2_2014_nEpiBC_3P Qrob_Chr01 1 v_1588_550 s_1AZJRA_1600 30,48 9,48 43,98 lod 2,3642 6,3
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2014_nSeqBC*_A4 Qrob_Chr01 1 s_1CFE4C_2114 s_1BDNCB_819 15,25 2 28,5 lod 2,9903 8,3

0 Targeting