Protein : Qrob_P0138980.2 Q. robur
Protein Identifier  ? Qrob_P0138980.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=9) PF00646//PF01344 - F-box domain // Kelch motif Gene Prediction Quality  validated
Protein length 

Sequence

Length: 444  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

24 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0009s07090g 1 443 + 443 Gaps:33 100.00 420 67.86 0.0 POPTRDRAFT_649911 hypothetical protein
blastp_kegg lcl|crb:CARUB_v10001083mg 1 442 + 442 Gaps:38 99.76 411 67.07 0.0 hypothetical protein
blastp_kegg lcl|csv:101215767 6 443 + 438 Gaps:23 98.18 439 64.50 0.0 F-box/kelch-repeat protein At5g26960-like
blastp_kegg lcl|cmo:103492456 2 443 + 442 Gaps:19 99.08 435 64.73 1e-179 F-box/kelch-repeat protein At5g26960
blastp_kegg lcl|ath:AT5G26960 1 442 + 442 Gaps:36 99.76 413 64.56 1e-176 F-box/kelch-repeat protein
blastp_kegg lcl|sot:102588410 1 443 + 443 Gaps:34 100.00 419 65.16 3e-176 F-box/kelch-repeat protein At5g26960-like
blastp_kegg lcl|rcu:RCOM_0785240 1 443 + 443 Gaps:35 100.00 420 66.43 9e-176 hypothetical protein
blastp_kegg lcl|aly:ARALYDRAFT_489527 1 442 + 442 Gaps:39 99.76 410 65.77 8e-175 kelch repeat-containing F-box family protein
blastp_kegg lcl|vvi:100247908 1 443 + 443 Gaps:27 100.00 416 67.55 9e-172 F-box/kelch-repeat protein At5g26960-like
blastp_kegg lcl|brp:103837153 1 442 + 442 Gaps:40 99.76 409 65.69 1e-171 F-box/kelch-repeat protein At5g26960
blastp_uniprot_sprot sp|Q6NPN5|FK113_ARATH 1 442 + 442 Gaps:36 99.76 413 64.56 5e-178 F-box/kelch-repeat protein At5g26960 OS Arabidopsis thaliana GN At5g26960 PE 2 SV 1
blastp_uniprot_sprot sp|Q9CAG8|FBK28_ARATH 54 255 + 202 Gaps:29 54.52 376 28.78 6e-17 F-box/kelch-repeat protein At1g67480 OS Arabidopsis thaliana GN At1g67480 PE 2 SV 1
blastp_uniprot_sprot sp|Q8LAW2|AFR_ARATH 22 235 + 214 Gaps:23 56.72 372 32.23 2e-14 F-box protein AFR OS Arabidopsis thaliana GN AFR PE 1 SV 2
blastp_uniprot_sprot sp|Q9FKJ0|FK132_ARATH 44 293 + 250 Gaps:45 57.76 393 28.63 2e-12 F-box/kelch-repeat protein At5g60570 OS Arabidopsis thaliana GN At5g60570 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LI89|FBK70_ARATH 32 322 + 291 Gaps:82 77.96 422 25.53 5e-12 F-box/kelch-repeat protein At3g27150 OS Arabidopsis thaliana GN At3g27150 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SI02|FBK33_ARATH 51 335 + 285 Gaps:63 71.02 383 31.99 9e-10 F-box/kelch-repeat protein At2g22030 OS Arabidopsis thaliana GN At2g22030 PE 4 SV 1
blastp_uniprot_sprot sp|Q0WW40|FBK5_ARATH 52 253 + 202 Gaps:27 55.61 383 26.29 2e-09 F-box/kelch-repeat protein At1g16250 OS Arabidopsis thaliana GN At1g16250 PE 2 SV 1
blastp_uniprot_sprot sp|Q9T035|FBK97_ARATH 53 235 + 183 Gaps:45 51.51 365 37.77 6e-09 Putative F-box/kelch-repeat protein At4g39290 OS Arabidopsis thaliana GN At4g39290 PE 4 SV 1
blastp_uniprot_sprot sp|Q1PE10|FK102_ARATH 18 329 + 312 Gaps:73 78.36 402 27.62 9e-09 F-box/kelch-repeat protein At4g39590 OS Arabidopsis thaliana GN At4g39590 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LX87|FBK74_ARATH 52 231 + 180 Gaps:22 48.65 370 32.22 2e-08 Putative F-box/kelch-repeat protein At3g46050 OS Arabidopsis thaliana GN At3g46050 PE 4 SV 1
rpsblast_cdd gnl|CDD|165380 165 256 + 92 Gaps:11 19.29 534 28.16 2e-09 PHA03098 PHA03098 kelch-like protein Provisional.
rpsblast_cdd gnl|CDD|201368 52 97 + 46 none 95.83 48 50.00 2e-08 pfam00646 F-box F-box domain. This domain is approximately 50 amino acids long and is usually found in the N-terminal half of a variety of proteins. Two motifs that are commonly found associated with the F-box domain are the leucine rich repeats (LRRs pfam00560 and pfam07723) and the WD repeat (pfam00400). The F-box domain has a role in mediating protein-protein interactions in a variety of contexts such as polyubiquitination transcription elongation centromere binding and translational repression.
rpsblast_cdd gnl|CDD|197608 57 93 + 37 none 90.24 41 45.95 6e-07 smart00256 FBOX A Receptor for Ubiquitination Targets.
rpsblast_kog gnl|CDD|39642 54 441 + 388 Gaps:83 59.72 571 23.46 5e-15 KOG4441 KOG4441 KOG4441 Proteins containing BTB/POZ and Kelch domains involved in regulatory/signal transduction processes [Signal transduction mechanisms General function prediction only].

13 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 154 335 182 PTHR24412:SF150 none none none
PANTHER 154 335 182 PTHR24412 none none none
PANTHER 355 442 88 PTHR24412 none none none
SMART 205 248 44 SM00612 none none IPR006652
Gene3D 138 439 302 G3DSA:2.120.10.80 none none IPR015915
Pfam 193 231 39 PF01344 none Kelch motif IPR006652
SUPERFAMILY 49 99 51 SSF81383 none none IPR001810
PANTHER 355 442 88 PTHR24412:SF150 none none none
SMART 57 97 41 SM00256 none A Receptor for Ubiquitination Targets IPR001810
Pfam 53 94 42 PF00646 none F-box domain IPR001810
Gene3D 52 93 42 G3DSA:1.20.1280.50 none none none
SUPERFAMILY 131 340 210 SSF117281 none none none
ProSiteProfiles 51 96 46 PS50181 none F-box domain profile. IPR001810

0 Localization

9 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL1_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AMVCC_444 s_1BE1VC_321 4 0 31 lod 3,2 7,4
Bourran2_2003_QTL8_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AH7I_610 s_1BE1VC_321 4,6 0 28 lod 3,5 7,4
Bourran2_2007_QTL6_peak_Bud_burst_3P Qrob_Chr01 1 s_1BE1VC_321 s_1A5JRZ_890 5 0 25 lod 2,4 6
Bourran2_2014_nEpiBC_3P Qrob_Chr01 1 v_1588_550 s_1AZJRA_1600 30,48 9,48 43,98 lod 2,3642 6,3
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2014_nSeqBC*_A4 Qrob_Chr01 1 s_1CFE4C_2114 s_1BDNCB_819 15,25 2 28,5 lod 2,9903 8,3

0 Targeting