Protein : Qrob_P0138930.2 Q. robur
Protein Identifier  ? Qrob_P0138930.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=6) PTHR10177//PTHR10177:SF190 - CYCLINE // SUBFAMILY NOT NAMED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 251  
Kegg Orthology  K05868
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Protein Sequence Displayer

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0 Synonyms

0 GO Terms

38 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_0785250 23 234 + 212 Gaps:11 52.05 390 71.43 3e-86 cyclin B putative
blastp_kegg lcl|tcc:TCM_040973 24 234 + 211 Gaps:12 50.72 416 70.14 1e-84 Cyclin B1 putative
blastp_kegg lcl|gmx:547782 38 234 + 197 Gaps:5 43.64 440 66.67 1e-78 mitotic cyclin b1-type
blastp_kegg lcl|gmx:100801274 51 234 + 184 Gaps:7 40.68 440 71.51 7e-78 G2/mitotic-specific cyclin-1-like
blastp_kegg lcl|cic:CICLE_v10015514mg 1 234 + 234 Gaps:14 59.75 395 58.05 1e-76 hypothetical protein
blastp_kegg lcl|cit:102621929 1 234 + 234 Gaps:14 59.90 394 58.05 1e-76 G2/mitotic-specific cyclin-1-like
blastp_kegg lcl|pper:PRUPE_ppa021575mg 46 234 + 189 Gaps:2 44.42 430 65.45 7e-76 hypothetical protein
blastp_kegg lcl|pop:POPTR_0009s07100g 28 234 + 207 Gaps:14 49.00 402 68.02 7e-76 POPTRDRAFT_804416 cyclin b1-type family protein
blastp_kegg lcl|vvi:100261859 63 234 + 172 Gaps:2 38.41 453 68.97 1e-75 G2/mitotic-specific cyclin S13-6-like
blastp_kegg lcl|pmum:103319490 46 234 + 189 Gaps:4 43.57 443 64.77 6e-75 G2/mitotic-specific cyclin S13-7-like
blastp_pdb 2wxv_D 136 234 + 99 Gaps:1 37.74 265 49.00 4e-23 mol:protein length:265 CYCLIN-A2
blastp_pdb 2wxv_B 136 234 + 99 Gaps:1 37.74 265 49.00 4e-23 mol:protein length:265 CYCLIN-A2
blastp_pdb 2wpa_D 136 234 + 99 Gaps:1 37.74 265 49.00 4e-23 mol:protein length:265 CYCLIN A2
blastp_pdb 2wpa_B 136 234 + 99 Gaps:1 37.74 265 49.00 4e-23 mol:protein length:265 CYCLIN A2
blastp_pdb 2wip_D 136 234 + 99 Gaps:1 37.74 265 49.00 4e-23 mol:protein length:265 CYCLIN-A2
blastp_pdb 2wip_B 136 234 + 99 Gaps:1 37.74 265 49.00 4e-23 mol:protein length:265 CYCLIN-A2
blastp_pdb 2wih_D 136 234 + 99 Gaps:1 37.74 265 49.00 4e-23 mol:protein length:265 CYCLIN-A2
blastp_pdb 2wih_B 136 234 + 99 Gaps:1 37.74 265 49.00 4e-23 mol:protein length:265 CYCLIN-A2
blastp_pdb 2c4g_D 136 234 + 99 Gaps:1 37.74 265 49.00 4e-23 mol:protein length:265 CYCLIN A2
blastp_pdb 2c4g_B 136 234 + 99 Gaps:1 37.74 265 49.00 4e-23 mol:protein length:265 CYCLIN A2
blastp_uniprot_sprot sp|P25011|CCNB1_SOYBN 37 234 + 198 Gaps:4 43.61 454 56.57 1e-66 G2/mitotic-specific cyclin S13-6 OS Glycine max PE 2 SV 1
blastp_uniprot_sprot sp|P34801|CCN2_ANTMA 34 234 + 201 Gaps:3 45.35 441 56.50 9e-64 G2/mitotic-specific cyclin-2 OS Antirrhinum majus PE 2 SV 1
blastp_uniprot_sprot sp|P34800|CCN1_ANTMA 33 234 + 202 Gaps:3 43.34 473 57.56 1e-63 G2/mitotic-specific cyclin-1 OS Antirrhinum majus PE 2 SV 1
blastp_uniprot_sprot sp|Q0JIF2|CCB11_ORYSJ 67 234 + 168 Gaps:9 38.08 449 57.31 4e-60 Cyclin-B1-1 OS Oryza sativa subsp. japonica GN CYCB1-1 PE 2 SV 2
blastp_uniprot_sprot sp|O48790|CCB14_ARATH 42 234 + 193 Gaps:12 48.32 387 55.61 7e-57 Cyclin-B1-4 OS Arabidopsis thaliana GN CYCB1-4 PE 2 SV 1
blastp_uniprot_sprot sp|Q39067|CCB12_ARATH 4 234 + 231 Gaps:22 51.01 445 50.22 3e-56 Cyclin-B1-2 OS Arabidopsis thaliana GN CYCB1-2 PE 1 SV 2
blastp_uniprot_sprot sp|Q0DH40|CCB15_ORYSJ 94 234 + 141 none 31.40 449 60.28 3e-56 Cyclin-B1-5 OS Oryza sativa subsp. japonica GN CYCB1-5 PE 3 SV 1
blastp_uniprot_sprot sp|P30183|CCB11_ARATH 44 234 + 191 Gaps:6 43.22 428 54.05 2e-53 Cyclin-B1-1 OS Arabidopsis thaliana GN CYCB1-1 PE 1 SV 2
blastp_uniprot_sprot sp|Q0JNK6|CCB13_ORYSJ 68 233 + 166 Gaps:4 34.89 470 54.88 6e-52 Cyclin-B1-3 OS Oryza sativa subsp. japonica GN CYCB1-3 PE 2 SV 2
blastp_uniprot_sprot sp|Q39069|CCB13_ARATH 9 234 + 226 Gaps:28 48.31 414 51.00 2e-48 Cyclin-B1-3 OS Arabidopsis thaliana GN CYCB1-3 PE 2 SV 2

8 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PIRSF 4 235 232 PIRSF001771 none none none
Gene3D 157 234 78 G3DSA:1.10.472.10 none none IPR013763
PANTHER 62 234 173 PTHR10177:SF190 none none none
ProSitePatterns 171 202 32 PS00292 none Cyclins signature. IPR006671
Pfam 142 234 93 PF00134 none Cyclin, N-terminal domain IPR006671
PANTHER 62 234 173 PTHR10177 none none none
SUPERFAMILY 131 233 103 SSF47954 none none IPR013763
SMART 176 245 70 SM00385 none domain present in cyclins, TFIIB and Retinoblastoma IPR013763

0 Localization

9 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL1_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AMVCC_444 s_1BE1VC_321 4 0 31 lod 3,2 7,4
Bourran2_2003_QTL8_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AH7I_610 s_1BE1VC_321 4,6 0 28 lod 3,5 7,4
Bourran2_2007_QTL6_peak_Bud_burst_3P Qrob_Chr01 1 s_1BE1VC_321 s_1A5JRZ_890 5 0 25 lod 2,4 6
Bourran2_2014_nEpiBC_3P Qrob_Chr01 1 v_1588_550 s_1AZJRA_1600 30,48 9,48 43,98 lod 2,3642 6,3
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2014_nSeqBC*_A4 Qrob_Chr01 1 s_1CFE4C_2114 s_1BDNCB_819 15,25 2 28,5 lod 2,9903 8,3

0 Targeting