Protein : Qrob_P0138880.2 Q. robur
Protein Identifier  ? Qrob_P0138880.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Gene Prediction Quality  validated Protein length 

Sequence

Length: 456  
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0 Synonyms

0 GO Terms

14 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa004638mg 1 455 + 455 Gaps:39 99.20 498 83.00 0.0 hypothetical protein
blastp_kegg lcl|pmum:103326909 1 455 + 455 Gaps:39 99.20 498 82.59 0.0 cingulin
blastp_kegg lcl|pop:POPTR_0009s07120g 1 455 + 455 Gaps:39 100.00 494 81.58 0.0 POPTRDRAFT_804415 plectin-related family protein
blastp_kegg lcl|tcc:TCM_040982 1 455 + 455 Gaps:39 100.00 494 81.38 0.0 Plectin-related isoform 1
blastp_kegg lcl|cit:102622518 1 455 + 455 Gaps:39 100.00 494 80.77 0.0 uncharacterized LOC102622518
blastp_kegg lcl|pxb:103948575 1 455 + 455 Gaps:39 100.00 494 81.17 0.0 uncharacterized LOC103948575
blastp_kegg lcl|rcu:RCOM_0785850 1 455 + 455 Gaps:39 100.00 494 79.96 0.0 transcription factor putative
blastp_kegg lcl|gmx:100800672 1 455 + 455 Gaps:39 100.00 494 79.15 0.0 rootletin-like
blastp_kegg lcl|gmx:100800736 1 455 + 455 Gaps:39 100.00 494 79.15 0.0 cingulin-like
blastp_kegg lcl|mtr:MTR_5g088860 1 455 + 455 Gaps:39 98.21 503 78.14 0.0 hypothetical protein
blastp_pdb 4dix_B 275 454 + 180 Gaps:39 95.22 230 62.56 2e-92 mol:protein length:230 Plectin-related protein
blastp_pdb 4dix_A 275 454 + 180 Gaps:39 95.22 230 62.56 2e-92 mol:protein length:230 Plectin-related protein
blastp_pdb 4djg_B 100 151 + 52 none 100.00 52 94.23 6e-24 mol:protein length:52 Plectin-related protein
blastp_pdb 4djg_A 100 151 + 52 none 100.00 52 94.23 6e-24 mol:protein length:52 Plectin-related protein

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Coils 239 260 22 Coil none none none
Coils 210 231 22 Coil none none none
PANTHER 2 455 454 PTHR31172:SF2 none none none
PANTHER 2 455 454 PTHR31172 none none none
Coils 159 209 51 Coil none none none

0 Localization

9 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL1_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AMVCC_444 s_1BE1VC_321 4 0 31 lod 3,2 7,4
Bourran2_2003_QTL8_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AH7I_610 s_1BE1VC_321 4,6 0 28 lod 3,5 7,4
Bourran2_2007_QTL6_peak_Bud_burst_3P Qrob_Chr01 1 s_1BE1VC_321 s_1A5JRZ_890 5 0 25 lod 2,4 6
Bourran2_2014_nEpiBC_3P Qrob_Chr01 1 v_1588_550 s_1AZJRA_1600 30,48 9,48 43,98 lod 2,3642 6,3
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2014_nSeqBC*_A4 Qrob_Chr01 1 s_1CFE4C_2114 s_1BDNCB_819 15,25 2 28,5 lod 2,9903 8,3

0 Targeting