Protein : Qrob_P0138850.2 Q. robur
Protein Identifier  ? Qrob_P0138850.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=17) PF00560//PF13516 - Leucine Rich Repeat // Leucine Rich repeat Gene Prediction Quality  validated
Protein length 

Sequence

Length: 691  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

36 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0001s04040g 1 690 + 690 Gaps:63 92.05 805 53.85 0.0 POPTRDRAFT_750424 hypothetical protein
blastp_kegg lcl|vvi:100253527 2 679 + 678 Gaps:75 89.80 814 56.63 0.0 LRR receptor-like serine/threonine-protein kinase GSO1
blastp_kegg lcl|cit:102618284 2 688 + 687 Gaps:77 90.20 816 54.76 0.0 probable LRR receptor-like serine/threonine-protein kinase At1g34110-like
blastp_kegg lcl|rcu:RCOM_0343070 27 670 + 644 Gaps:63 85.17 816 53.96 0.0 serine-threonine protein kinase plant-type putative (EC:1.3.1.74)
blastp_kegg lcl|cic:CICLE_v10024612mg 1 672 + 672 Gaps:67 88.41 820 51.31 0.0 hypothetical protein
blastp_kegg lcl|vvi:100263825 2 680 + 679 Gaps:75 90.21 827 51.21 0.0 LRR receptor-like serine/threonine-protein kinase GSO2-like
blastp_kegg lcl|csv:101212880 2 675 + 674 Gaps:68 87.17 842 50.14 0.0 LRR receptor-like serine/threonine-protein kinase GSO1-like
blastp_kegg lcl|pmum:103338993 30 672 + 643 Gaps:123 91.76 740 60.38 0.0 LRR receptor-like serine/threonine-protein kinase FLS2
blastp_kegg lcl|cit:102619599 1 672 + 672 Gaps:91 88.07 796 50.36 0.0 probable LRR receptor-like serine/threonine-protein kinase At1g34110-like
blastp_kegg lcl|cmo:103492419 2 689 + 688 Gaps:67 91.01 823 49.53 0.0 LRR receptor-like serine/threonine-protein kinase GSO1
blastp_pdb 3rj0_A 38 632 + 595 Gaps:153 74.48 772 42.61 8e-54 mol:protein length:772 Protein BRASSINOSTEROID INSENSITIVE 1
blastp_pdb 3riz_A 38 632 + 595 Gaps:153 74.48 772 42.61 8e-54 mol:protein length:772 Protein BRASSINOSTEROID INSENSITIVE 1
blastp_pdb 3rgz_A 38 632 + 595 Gaps:153 74.87 768 42.61 8e-54 mol:protein length:768 Protein BRASSINOSTEROID INSENSITIVE 1
blastp_pdb 3rgx_A 38 632 + 595 Gaps:153 74.87 768 42.61 8e-54 mol:protein length:768 Protein BRASSINOSTEROID INSENSITIVE 1
blastp_pdb 1ogq_A 64 621 + 558 Gaps:138 76.36 313 61.09 1e-16 mol:protein length:313 POLYGALACTURONASE INHIBITING PROTEIN
blastp_uniprot_sprot sp|Q9C9H7|RLP12_ARATH 30 656 + 627 Gaps:165 85.24 847 41.14 2e-70 Receptor-like protein 12 OS Arabidopsis thaliana GN RLP12 PE 2 SV 2
blastp_uniprot_sprot sp|Q9FL28|FLS2_ARATH 30 654 + 625 Gaps:263 67.52 1173 53.54 2e-69 LRR receptor-like serine/threonine-protein kinase FLS2 OS Arabidopsis thaliana GN FLS2 PE 1 SV 1
blastp_uniprot_sprot sp|Q8VZG8|Y4885_ARATH 42 642 + 601 Gaps:121 58.76 1045 39.74 2e-68 Probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS Arabidopsis thaliana GN At4g08850 PE 1 SV 3
blastp_uniprot_sprot sp|Q9LP24|Y1571_ARATH 30 607 + 578 Gaps:140 59.46 1120 50.75 3e-66 Probable leucine-rich repeat receptor-like protein kinase At1g35710 OS Arabidopsis thaliana GN At1g35710 PE 2 SV 1
blastp_uniprot_sprot sp|Q42371|ERECT_ARATH 30 679 + 650 Gaps:177 55.74 976 52.21 4e-63 LRR receptor-like serine/threonine-protein kinase ERECTA OS Arabidopsis thaliana GN ERECTA PE 1 SV 1
blastp_uniprot_sprot sp|C0LGQ5|GSO1_ARATH 26 618 + 593 Gaps:316 61.89 1249 56.66 7e-62 LRR receptor-like serine/threonine-protein kinase GSO1 OS Arabidopsis thaliana GN GSO1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SSL9|PEPR1_ARATH 38 601 + 564 Gaps:293 59.04 1123 58.67 2e-60 Leucine-rich repeat receptor-like protein kinase PEPR1 OS Arabidopsis thaliana GN PEPR1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9M2Z1|BAME2_ARATH 23 621 + 599 Gaps:54 56.39 1002 34.51 4e-59 Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM2 OS Arabidopsis thaliana GN BAM2 PE 1 SV 1
blastp_uniprot_sprot sp|Q9FZ59|PEPR2_ARATH 30 620 + 591 Gaps:201 58.82 1088 52.50 4e-59 Leucine-rich repeat receptor-like protein kinase PEPR2 OS Arabidopsis thaliana GN PEPR2 PE 1 SV 1
blastp_uniprot_sprot sp|Q9LHP4|RCH2_ARATH 17 599 + 583 Gaps:235 53.55 1141 59.74 1e-58 Receptor-like protein kinase 2 OS Arabidopsis thaliana GN RCH2 PE 1 SV 1
rpsblast_cdd gnl|CDD|177728 30 666 + 637 Gaps:293 62.60 968 63.70 2e-64 PLN00113 PLN00113 leucine-rich repeat receptor-like protein kinase Provisional.
rpsblast_cdd gnl|CDD|178695 88 669 + 582 Gaps:54 33.55 623 51.20 1e-13 PLN03150 PLN03150 hypothetical protein Provisional.
rpsblast_cdd gnl|CDD|178749 39 338 + 300 Gaps:27 25.59 1153 28.47 4e-07 PLN03210 PLN03210 Resistant to P. syringae 6 Provisional.
rpsblast_kog gnl|CDD|35838 26 616 + 591 Gaps:207 44.03 1081 49.37 1e-21 KOG0618 KOG0618 KOG0618 Serine/threonine phosphatase 2C containing leucine-rich repeats similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms].
rpsblast_kog gnl|CDD|35665 49 595 + 547 Gaps:153 28.84 1255 46.13 1e-19 KOG0444 KOG0444 KOG0444 Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton].

35 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 399 421 23 PF13516 none Leucine Rich repeat none
SUPERFAMILY 380 472 93 SSF52047 none none none
SUPERFAMILY 512 600 89 SSF52047 none none none
SMART 581 602 22 SM00365 none Leucine-rich repeat, SDS22-like subfamily none
SMART 137 163 27 SM00365 none Leucine-rich repeat, SDS22-like subfamily none
SMART 89 115 27 SM00365 none Leucine-rich repeat, SDS22-like subfamily none
SMART 398 424 27 SM00365 none Leucine-rich repeat, SDS22-like subfamily none
SMART 446 472 27 SM00365 none Leucine-rich repeat, SDS22-like subfamily none
Gene3D 512 599 88 G3DSA:3.80.10.10 none none none
Gene3D 261 471 211 G3DSA:3.80.10.10 none none none
Gene3D 40 256 217 G3DSA:3.80.10.10 none none none
Phobius 646 669 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 139 161 23 PF00560 none Leucine Rich Repeat IPR001611
Pfam 448 470 23 PF00560 none Leucine Rich Repeat IPR001611
Pfam 116 137 22 PF00560 none Leucine Rich Repeat IPR001611
Pfam 583 599 17 PF00560 none Leucine Rich Repeat IPR001611
Pfam 91 113 23 PF00560 none Leucine Rich Repeat IPR001611
SUPERFAMILY 31 188 158 SSF52058 none none none
SUPERFAMILY 216 466 251 SSF52058 none none none
PRINTS 446 459 14 PR00019 none Leucine-rich repeat signature none
PRINTS 236 249 14 PR00019 none Leucine-rich repeat signature none
Phobius 670 690 21 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 1 645 645 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 520 669 150 PTHR24420 none none none
PANTHER 287 347 61 PTHR24420 none none none
PANTHER 1 19 19 PTHR24420 none none none
PANTHER 99 191 93 PTHR24420 none none none
PANTHER 399 473 75 PTHR24420 none none none
SMART 398 422 25 SM00369 none Leucine-rich repeats, typical (most populated) subfamily IPR003591
SMART 254 280 27 SM00369 none Leucine-rich repeats, typical (most populated) subfamily IPR003591

1 Localization

Analysis Start End Length
TMHMM 652 674 22

9 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL1_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AMVCC_444 s_1BE1VC_321 4 0 31 lod 3,2 7,4
Bourran2_2003_QTL8_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AH7I_610 s_1BE1VC_321 4,6 0 28 lod 3,5 7,4
Bourran2_2007_QTL6_peak_Bud_burst_3P Qrob_Chr01 1 s_1BE1VC_321 s_1A5JRZ_890 5 0 25 lod 2,4 6
Bourran2_2014_nEpiBC_3P Qrob_Chr01 1 v_1588_550 s_1AZJRA_1600 30,48 9,48 43,98 lod 2,3642 6,3
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2014_nSeqBC*_A4 Qrob_Chr01 1 s_1CFE4C_2114 s_1BDNCB_819 15,25 2 28,5 lod 2,9903 8,3

0 Targeting