Protein : Qrob_P0138780.2 Q. robur
Protein Identifier  ? Qrob_P0138780.2 Organism . Name  Quercus robur
Score  59.2 Score Type  egn
Protein Description  (M=2) PTHR23125//PTHR23125:SF262 - F-BOX/LEUCINE RICH REPEAT PROTEIN // SUBFAMILY NOT NAMED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 310  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

20 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|sot:102593658 8 301 + 294 Gaps:11 92.63 312 49.48 4e-92 F-box protein FBW2-like
blastp_kegg lcl|mus:103992264 34 303 + 270 Gaps:5 88.93 298 52.83 4e-92 F-box protein FBW2-like
blastp_kegg lcl|pda:103713372 51 301 + 251 Gaps:25 92.78 291 48.89 2e-86 F-box protein FBW2-like
blastp_kegg lcl|sly:101264760 8 294 + 287 Gaps:11 89.81 314 48.94 3e-85 F-box protein FBW2-like
blastp_kegg lcl|dosa:Os04t0448700-00 35 292 + 258 Gaps:6 61.99 413 46.88 2e-72 Os04g0448700 Similar to H0818E04.4 protein.
blastp_kegg lcl|bdi:100837351 33 296 + 264 Gaps:10 96.27 268 46.90 5e-72 F-box protein FBW2-like
blastp_kegg lcl|atr:s00073p00116690 36 270 + 235 Gaps:12 71.61 317 44.49 2e-51 AMTR_s00073p00116690 hypothetical protein
blastp_kegg lcl|mus:103977503 36 264 + 229 Gaps:11 68.54 321 45.00 3e-51 F-box protein FBW2-like
blastp_kegg lcl|mus:103989490 19 264 + 246 Gaps:11 68.90 344 42.19 4e-51 F-box protein FBW2-like isoform X1
blastp_kegg lcl|sot:102595752 35 275 + 241 Gaps:11 72.50 320 40.52 8e-51 F-box protein FBW2-like
blastp_uniprot_sprot sp|Q9ZPE4|FBW2_ARATH 36 265 + 230 Gaps:10 70.03 317 37.39 3e-43 F-box protein FBW2 OS Arabidopsis thaliana GN FBW2 PE 1 SV 1
blastp_uniprot_sprot sp|Q9M0U9|SKI19_ARATH 31 309 + 279 Gaps:20 88.41 302 30.71 2e-25 F-box protein SKIP19 OS Arabidopsis thaliana GN SKIP19 PE 1 SV 1
blastp_uniprot_sprot sp|Q9S9V9|FBL23_ARATH 36 294 + 259 Gaps:18 71.71 449 34.47 6e-23 Putative F-box/LRR-repeat protein 23 OS Arabidopsis thaliana GN FBL23 PE 4 SV 1
blastp_uniprot_sprot sp|Q9FDX1|SKIP1_ARATH 33 258 + 226 Gaps:25 79.67 300 30.54 2e-21 F-box protein SKIP1 OS Arabidopsis thaliana GN SKIP1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9M096|FBL19_ARATH 24 261 + 238 Gaps:29 86.05 301 30.50 3e-21 Putative F-box/LRR-repeat protein 19 OS Arabidopsis thaliana GN FBL19 PE 4 SV 1
blastp_uniprot_sprot sp|Q9M0U8|FBL21_ARATH 36 280 + 245 Gaps:22 81.25 304 29.55 7e-19 Putative F-box/LRR-repeat protein 21 OS Arabidopsis thaliana GN FBL21 PE 4 SV 1
blastp_uniprot_sprot sp|Q9M0U7|FB221_ARATH 36 283 + 248 Gaps:18 79.61 309 28.86 4e-16 Putative F-box protein At4g05475 OS Arabidopsis thaliana GN At4g05475 PE 4 SV 2
blastp_uniprot_sprot sp|Q9S9V8|FBL9_ARATH 30 267 + 238 Gaps:18 93.50 246 29.13 7e-15 Putative F-box/LRR-repeat protein 9 OS Arabidopsis thaliana GN FBL9 PE 4 SV 1
blastp_uniprot_sprot sp|Q9M0U6|FBL22_ARATH 26 280 + 255 Gaps:28 79.80 307 29.80 6e-14 Putative F-box/LRR-repeat protein 22 OS Arabidopsis thaliana GN FBL22 PE 4 SV 1
rpsblast_kog gnl|CDD|37158 118 263 + 146 Gaps:3 30.91 482 30.87 2e-11 KOG1947 KOG1947 KOG1947 Leucine rich repeat proteins some proteins contain F-box [General function prediction only].

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 34 275 242 G3DSA:3.80.10.10 none none none
SUPERFAMILY 111 262 152 SSF52047 none none none
Pfam 35 80 46 PF00646 none F-box domain IPR001810
PANTHER 28 261 234 PTHR23125 none none none
SUPERFAMILY 34 96 63 SSF81383 none none IPR001810
PANTHER 28 261 234 PTHR23125:SF262 none none none

0 Localization

9 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL1_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AMVCC_444 s_1BE1VC_321 4 0 31 lod 3,2 7,4
Bourran2_2003_QTL8_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AH7I_610 s_1BE1VC_321 4,6 0 28 lod 3,5 7,4
Bourran2_2007_QTL6_peak_Bud_burst_3P Qrob_Chr01 1 s_1BE1VC_321 s_1A5JRZ_890 5 0 25 lod 2,4 6
Bourran2_2014_nEpiBC_3P Qrob_Chr01 1 v_1588_550 s_1AZJRA_1600 30,48 9,48 43,98 lod 2,3642 6,3
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2014_nSeqBC*_A4 Qrob_Chr01 1 s_1CFE4C_2114 s_1BDNCB_819 15,25 2 28,5 lod 2,9903 8,3

0 Targeting