Protein : Qrob_P0137410.2 Q. robur
Protein Identifier  ? Qrob_P0137410.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) K02437 - glycine cleavage system H protein Gene Prediction Quality  validated
Protein length 

Sequence

Length: 166  
Kegg Orthology  K02437
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0005960 glycine cleavage complex A protein complex that catalyzes the reversible oxidation of glycine. In E. coli, it has four components: dihydrolipoamide dehydrogenase, glycine dehydrogenase (decarboxylating), lipoyl-GcvH-protein and aminomethyltransferase, also known as L, P, H, and T.
GO:0019464 glycine decarboxylation via glycine cleavage system The chemical reactions and pathways resulting in the breakdown of glycine by oxidative cleavage to carbon dioxide, ammonia, and a methylene group, mediated by enzymes of the glycine cleavage complex.

40 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100259229 1 165 + 165 none 100.00 165 91.52 2e-108 glycine cleavage system H protein mitochondrial-like
blastp_kegg lcl|tcc:TCM_015756 1 165 + 165 none 100.00 165 90.91 4e-107 Single hybrid motif superfamily protein
blastp_kegg lcl|pxb:103967442 1 165 + 165 none 100.00 165 91.52 9e-106 glycine cleavage system H protein 3 mitochondrial
blastp_kegg lcl|mdm:103403988 1 165 + 165 none 100.00 165 90.91 2e-105 glycine cleavage system H protein 3 mitochondrial-like
blastp_kegg lcl|pper:PRUPE_ppa012546mg 1 165 + 165 none 100.00 165 91.52 3e-105 hypothetical protein
blastp_kegg lcl|pmum:103336932 1 165 + 165 none 100.00 165 90.91 5e-105 glycine cleavage system H protein mitochondrial
blastp_kegg lcl|mdm:103409716 1 165 + 165 none 100.00 165 90.30 6e-105 glycine cleavage system H protein 3 mitochondrial
blastp_kegg lcl|pxb:103965719 1 165 + 165 none 100.00 165 90.91 7e-105 glycine cleavage system H protein 3 mitochondrial-like
blastp_kegg lcl|mdm:103437713 1 165 + 165 none 100.00 165 90.30 1e-104 glycine cleavage system H protein 3 mitochondrial
blastp_kegg lcl|pxb:103962468 1 165 + 165 none 100.00 165 90.91 1e-104 glycine cleavage system H protein 3 mitochondrial-like
blastp_pdb 1htp_A 35 165 + 131 none 100.00 131 83.97 3e-77 mol:protein length:131 H-PROTEIN
blastp_pdb 1hpc_B 35 165 + 131 none 100.00 131 83.97 3e-77 mol:protein length:131 H PROTEIN OF THE GLYCINE CLEAVAGE SYSTEM
blastp_pdb 1hpc_A 35 165 + 131 none 100.00 131 83.97 3e-77 mol:protein length:131 H PROTEIN OF THE GLYCINE CLEAVAGE SYSTEM
blastp_pdb 1dxm_B 35 165 + 131 none 100.00 131 83.97 3e-77 mol:protein length:131 H PROTEIN
blastp_pdb 1dxm_A 35 165 + 131 none 100.00 131 83.97 3e-77 mol:protein length:131 H PROTEIN
blastp_pdb 3klr_A 42 157 + 116 none 92.80 125 53.45 1e-39 mol:protein length:125 Glycine cleavage system H protein
blastp_pdb 2ka7_A 42 161 + 120 none 96.77 124 50.00 4e-39 mol:protein length:124 Glycine cleavage system H protein
blastp_pdb 1zko_B 42 161 + 120 none 88.24 136 50.00 5e-39 mol:protein length:136 Glycine cleavage system H protein
blastp_pdb 1zko_A 42 161 + 120 none 88.24 136 50.00 5e-39 mol:protein length:136 Glycine cleavage system H protein
blastp_pdb 2edg_A 40 157 + 118 none 90.77 130 51.69 9e-39 mol:protein length:130 Glycine cleavage system H protein
blastp_uniprot_sprot sp|Q39732|GCSH_FLAAN 1 165 + 165 Gaps:3 100.00 162 85.80 6e-100 Glycine cleavage system H protein mitochondrial OS Flaveria anomala GN GDCSH PE 2 SV 1
blastp_uniprot_sprot sp|P49359|GCSH_FLAPR 1 165 + 165 Gaps:3 100.00 162 84.57 8e-99 Glycine cleavage system H protein mitochondrial OS Flaveria pringlei GN GDCSH PE 2 SV 1
blastp_uniprot_sprot sp|P46485|GCSH_FLATR 1 164 + 164 Gaps:5 98.79 165 84.05 1e-94 Glycine cleavage system H protein mitochondrial OS Flaveria trinervia GN GDCSH PE 2 SV 1
blastp_uniprot_sprot sp|P93255|GCSH_MESCR 1 163 + 163 Gaps:1 99.39 163 81.48 2e-93 Glycine cleavage system H protein mitochondrial OS Mesembryanthemum crystallinum GN GDCSH PE 2 SV 1
blastp_uniprot_sprot sp|P16048|GCSH_PEA 1 165 + 165 none 100.00 165 82.42 2e-92 Glycine cleavage system H protein mitochondrial OS Pisum sativum GN GDCSH PE 1 SV 1
blastp_uniprot_sprot sp|Q9LQL0|GCSH3_ARATH 1 165 + 165 Gaps:1 100.00 166 82.53 1e-91 Glycine cleavage system H protein 3 mitochondrial OS Arabidopsis thaliana GN GDH3 PE 1 SV 1
blastp_uniprot_sprot sp|P49360|GCSH_FLAPU 1 155 + 155 Gaps:3 100.00 152 84.21 5e-91 Glycine cleavage system H protein mitochondrial (Fragment) OS Flaveria pubescens GN GDCSH PE 2 SV 1
blastp_uniprot_sprot sp|P25855|GCSH1_ARATH 1 165 + 165 none 100.00 165 79.39 4e-88 Glycine cleavage system H protein 1 mitochondrial OS Arabidopsis thaliana GN GDH1 PE 1 SV 1
blastp_uniprot_sprot sp|A3C6G9|GCSH_ORYSJ 1 163 + 163 none 99.39 164 76.07 8e-88 Glycine cleavage system H protein mitochondrial OS Oryza sativa subsp. japonica GN GDCSH PE 1 SV 1
blastp_uniprot_sprot sp|A2Z9B8|GCSH_ORYSI 1 163 + 163 none 99.39 164 76.07 8e-88 Glycine cleavage system H protein mitochondrial OS Oryza sativa subsp. indica GN GDCSH PE 2 SV 1

9 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Hamap 38 159 122 MF_00272 none Glycine cleavage system H protein [gcvH]. IPR002930
TIGRFAM 39 162 124 TIGR00527 none gcvH: glycine cleavage system H protein IPR017453
Gene3D 40 161 122 G3DSA:2.40.50.100 none none none
PANTHER 2 165 164 PTHR11715:SF1 none none none
ProSiteProfiles 56 138 83 PS50968 none Biotinyl/lipoyl domain profile. IPR000089
PANTHER 2 165 164 PTHR11715 none none IPR002930
Pfam 41 160 120 PF01597 none Glycine cleavage H-protein IPR002930
ProSitePatterns 81 110 30 PS00189 none 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. IPR003016
SUPERFAMILY 37 160 124 SSF51230 none none IPR011053

1 Localization

Analysis Start End Length
SignalP_GRAM_POSITIVE 1 21 20

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 34   Mitochondrion 2 0.016 0.921 NON-PLANT 34