4 GO Terms
Identifier | Name | Description |
---|---|---|
GO:0020037 | heme binding | Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring. |
GO:0055114 | oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
GO:0004601 | peroxidase activity | Catalysis of the reaction: donor + hydrogen peroxide = oxidized donor + 2 H2O. |
GO:0006979 | response to oxidative stress | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals. |
34 Blast
Analysis | Hit | Start | End | Strand | Length | Note | Hit Coverage | Hit Length | Hit Pident | E Val | Hit Description |
---|---|---|---|---|---|---|---|---|---|---|---|
blastp_kegg | lcl|tcc:TCM_015775 | 1 | 324 | + | 324 | none | 98.78 | 328 | 76.23 | 0.0 | Peroxidase superfamily protein |
blastp_kegg | lcl|pop:POPTR_0001s02870g | 20 | 331 | + | 312 | none | 95.41 | 327 | 77.56 | 0.0 | Peroxidase 20 precursor family protein |
blastp_kegg | lcl|pmum:103336997 | 6 | 331 | + | 326 | Gaps:4 | 97.63 | 338 | 74.55 | 1e-180 | peroxidase 20 |
blastp_kegg | lcl|pper:PRUPE_ppa008666mg | 13 | 331 | + | 319 | Gaps:4 | 100.00 | 323 | 75.23 | 3e-180 | hypothetical protein |
blastp_kegg | lcl|vvi:100262575 | 1 | 330 | + | 330 | Gaps:1 | 99.70 | 332 | 74.32 | 3e-178 | peroxidase 20-like |
blastp_kegg | lcl|pxb:103960463 | 24 | 331 | + | 308 | Gaps:3 | 84.97 | 366 | 75.56 | 2e-173 | peroxidase 20 |
blastp_kegg | lcl|mdm:103436929 | 3 | 331 | + | 329 | Gaps:7 | 100.00 | 336 | 71.43 | 1e-172 | peroxidase 20 |
blastp_kegg | lcl|gmx:100778051 | 1 | 331 | + | 331 | Gaps:3 | 100.00 | 332 | 71.39 | 3e-171 | peroxidase 20-like |
blastp_kegg | lcl|cmo:103503509 | 1 | 330 | + | 330 | Gaps:7 | 99.70 | 336 | 68.36 | 1e-169 | peroxidase 20 |
blastp_kegg | lcl|csv:101226789 | 1 | 330 | + | 330 | Gaps:1 | 99.70 | 332 | 67.37 | 2e-166 | peroxidase 20-like |
blastp_pdb | 1sch_B | 27 | 330 | + | 304 | Gaps:17 | 99.66 | 294 | 53.24 | 4e-101 | mol:protein length:294 PEANUT PEROXIDASE MAJOR CATIONIC ISOZYME |
blastp_pdb | 1sch_A | 27 | 330 | + | 304 | Gaps:17 | 99.66 | 294 | 53.24 | 4e-101 | mol:protein length:294 PEANUT PEROXIDASE MAJOR CATIONIC ISOZYME |
blastp_pdb | 1qo4_A | 31 | 330 | + | 300 | Gaps:2 | 97.39 | 306 | 48.99 | 1e-97 | mol:protein length:306 PEROXIDASE |
blastp_pdb | 1pa2_A | 31 | 330 | + | 300 | Gaps:2 | 97.39 | 306 | 48.99 | 1e-97 | mol:protein length:306 PEROXIDASE |
blastp_pdb | 1qgj_B | 30 | 330 | + | 301 | Gaps:8 | 98.33 | 300 | 49.15 | 5e-90 | mol:protein length:300 PEROXIDASE N |
blastp_pdb | 1qgj_A | 30 | 330 | + | 301 | Gaps:8 | 98.33 | 300 | 49.15 | 5e-90 | mol:protein length:300 PEROXIDASE N |
blastp_pdb | 1fhf_C | 27 | 330 | + | 304 | Gaps:2 | 99.34 | 304 | 50.66 | 5e-88 | mol:protein length:304 SEED COAT PEROXIDASE |
blastp_pdb | 1fhf_B | 27 | 330 | + | 304 | Gaps:2 | 99.34 | 304 | 50.66 | 5e-88 | mol:protein length:304 SEED COAT PEROXIDASE |
blastp_pdb | 1fhf_A | 27 | 330 | + | 304 | Gaps:2 | 99.34 | 304 | 50.66 | 5e-88 | mol:protein length:304 SEED COAT PEROXIDASE |
blastp_pdb | 1gx2_B | 27 | 331 | + | 305 | Gaps:2 | 98.71 | 309 | 46.23 | 8e-86 | mol:protein length:309 PEROXIDASE C1A |
blastp_uniprot_sprot | sp|Q9SLH7|PER20_ARATH | 9 | 330 | + | 322 | Gaps:4 | 97.02 | 336 | 68.10 | 3e-162 | Peroxidase 20 OS Arabidopsis thaliana GN PER20 PE 2 SV 1 |
blastp_uniprot_sprot | sp|Q9FJZ9|PER72_ARATH | 4 | 330 | + | 327 | Gaps:12 | 97.92 | 336 | 54.41 | 1e-116 | Peroxidase 72 OS Arabidopsis thaliana GN PER72 PE 1 SV 1 |
blastp_uniprot_sprot | sp|Q9SI16|PER15_ARATH | 7 | 330 | + | 324 | Gaps:6 | 95.86 | 338 | 52.16 | 2e-110 | Peroxidase 15 OS Arabidopsis thaliana GN PER15 PE 2 SV 1 |
blastp_uniprot_sprot | sp|O23237|PER49_ARATH | 25 | 331 | + | 307 | Gaps:3 | 91.84 | 331 | 53.95 | 9e-108 | Peroxidase 49 OS Arabidopsis thaliana GN PER49 PE 2 SV 2 |
blastp_uniprot_sprot | sp|Q9SI17|PER14_ARATH | 7 | 330 | + | 324 | Gaps:5 | 95.85 | 337 | 50.46 | 8e-106 | Peroxidase 14 OS Arabidopsis thaliana GN PER14 PE 3 SV 1 |
blastp_uniprot_sprot | sp|Q96512|PER9_ARATH | 27 | 330 | + | 304 | Gaps:2 | 87.28 | 346 | 54.97 | 4e-105 | Peroxidase 9 OS Arabidopsis thaliana GN PER9 PE 1 SV 1 |
blastp_uniprot_sprot | sp|Q9SD46|PER36_ARATH | 19 | 330 | + | 312 | Gaps:5 | 89.83 | 344 | 52.43 | 4e-105 | Peroxidase 36 OS Arabidopsis thaliana GN PER36 PE 2 SV 2 |
blastp_uniprot_sprot | sp|A7NY33|PER4_VITVI | 22 | 330 | + | 309 | Gaps:13 | 93.46 | 321 | 54.67 | 8e-102 | Peroxidase 4 OS Vitis vinifera GN GSVIVT00023967001 PE 1 SV 1 |
blastp_uniprot_sprot | sp|P22195|PER1_ARAHY | 23 | 330 | + | 308 | Gaps:17 | 93.99 | 316 | 52.86 | 9e-101 | Cationic peroxidase 1 OS Arachis hypogaea GN PNC1 PE 1 SV 2 |
blastp_uniprot_sprot | sp|Q42578|PER53_ARATH | 6 | 330 | + | 325 | Gaps:9 | 96.12 | 335 | 47.52 | 3e-97 | Peroxidase 53 OS Arabidopsis thaliana GN PER53 PE 1 SV 1 |
28 Domain Motifs
Analysis | Begin | End | Length | Domain Identifier | Cross Ref | Description | Inter Pro |
---|---|---|---|---|---|---|---|
Phobius | 6 | 17 | 12 | SIGNAL_PEPTIDE_H_REGION | none | Hydrophobic region of a signal peptide. | none |
Gene3D | 179 | 309 | 131 | G3DSA:1.10.420.10 | none | none | none |
PRINTS | 120 | 137 | 18 | PR00458 | none | Haem peroxidase superfamily signature | IPR002016 |
PRINTS | 58 | 72 | 15 | PR00458 | none | Haem peroxidase superfamily signature | IPR002016 |
PRINTS | 247 | 262 | 16 | PR00458 | none | Haem peroxidase superfamily signature | IPR002016 |
PRINTS | 186 | 201 | 16 | PR00458 | none | Haem peroxidase superfamily signature | IPR002016 |
PRINTS | 138 | 150 | 13 | PR00458 | none | Haem peroxidase superfamily signature | IPR002016 |
PRINTS | 119 | 129 | 11 | PR00461 | "KEGG:00360+1.11.1.7","KEGG:00940+1.11.1.7","MetaCyc:PWY-5461","MetaCyc:PWY-7214","MetaCyc:PWY-7445" | Plant peroxidase signature | IPR000823 |
PRINTS | 245 | 260 | 16 | PR00461 | "KEGG:00360+1.11.1.7","KEGG:00940+1.11.1.7","MetaCyc:PWY-5461","MetaCyc:PWY-7214","MetaCyc:PWY-7445" | Plant peroxidase signature | IPR000823 |
PRINTS | 60 | 80 | 21 | PR00461 | "KEGG:00360+1.11.1.7","KEGG:00940+1.11.1.7","MetaCyc:PWY-5461","MetaCyc:PWY-7214","MetaCyc:PWY-7445" | Plant peroxidase signature | IPR000823 |
PRINTS | 100 | 113 | 14 | PR00461 | "KEGG:00360+1.11.1.7","KEGG:00940+1.11.1.7","MetaCyc:PWY-5461","MetaCyc:PWY-7214","MetaCyc:PWY-7445" | Plant peroxidase signature | IPR000823 |
PRINTS | 138 | 153 | 16 | PR00461 | "KEGG:00360+1.11.1.7","KEGG:00940+1.11.1.7","MetaCyc:PWY-5461","MetaCyc:PWY-7214","MetaCyc:PWY-7445" | Plant peroxidase signature | IPR000823 |
PRINTS | 185 | 197 | 13 | PR00461 | "KEGG:00360+1.11.1.7","KEGG:00940+1.11.1.7","MetaCyc:PWY-5461","MetaCyc:PWY-7214","MetaCyc:PWY-7445" | Plant peroxidase signature | IPR000823 |
PRINTS | 261 | 278 | 18 | PR00461 | "KEGG:00360+1.11.1.7","KEGG:00940+1.11.1.7","MetaCyc:PWY-5461","MetaCyc:PWY-7214","MetaCyc:PWY-7445" | Plant peroxidase signature | IPR000823 |
PRINTS | 304 | 317 | 14 | PR00461 | "KEGG:00360+1.11.1.7","KEGG:00940+1.11.1.7","MetaCyc:PWY-5461","MetaCyc:PWY-7214","MetaCyc:PWY-7445" | Plant peroxidase signature | IPR000823 |
PRINTS | 36 | 55 | 20 | PR00461 | "KEGG:00360+1.11.1.7","KEGG:00940+1.11.1.7","MetaCyc:PWY-5461","MetaCyc:PWY-7214","MetaCyc:PWY-7445" | Plant peroxidase signature | IPR000823 |
PANTHER | 23 | 331 | 309 | PTHR31388:SF4 | none | none | none |
Phobius | 18 | 22 | 5 | SIGNAL_PEPTIDE_C_REGION | none | C-terminal region of a signal peptide. | none |
PANTHER | 23 | 331 | 309 | PTHR31388 | none | none | none |
Pfam | 46 | 280 | 235 | PF00141 | none | Peroxidase | IPR002016 |
Phobius | 1 | 22 | 22 | SIGNAL_PEPTIDE | none | Signal peptide region | none |
Phobius | 23 | 331 | 309 | NON_CYTOPLASMIC_DOMAIN | none | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | none |
ProSitePatterns | 58 | 69 | 12 | PS00436 | none | Peroxidases active site signature. | IPR019794 |
Gene3D | 32 | 178 | 147 | G3DSA:1.10.520.10 | none | none | none |
ProSitePatterns | 186 | 196 | 11 | PS00435 | none | Peroxidases proximal heme-ligand signature. | IPR019793 |
Phobius | 1 | 5 | 5 | SIGNAL_PEPTIDE_N_REGION | none | N-terminal region of a signal peptide. | none |
ProSiteProfiles | 26 | 330 | 305 | PS50873 | none | Plant heme peroxidase family profile. | IPR002016 |
SUPERFAMILY | 27 | 330 | 304 | SSF48113 | none | none | IPR010255 |
1 Qtllist
Qtl Name | Chromosome Name | Linkage Group | Prox Marker | Dist Marker | Position QTL | Pos One | Pos Two | Test Type | Test Value | R 2 |
---|---|---|---|---|---|---|---|---|---|---|
PM_1999_QTL14_peak_Bud_burst_3P | Qrob_Chr03 | 3 | s_2F0SI1_756 | v_6056_735 | 11,78 | 3,78 | 50,78 | lod | 2,5 | 4,5 |