Protein : Qrob_P0133790.2 Q. robur
Protein Identifier  ? Qrob_P0133790.2 Organism . Name  Quercus robur
Score  88.1 Score Type  egn
Protein Description  (M=2) 3.5.3.12 - Agmatine deiminase. Code Enzyme  EC:3.5.3.12
Gene Prediction Quality  validated Protein length 

Sequence

Length: 352  
Kegg Orthology  K10536
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0004668 protein-arginine deiminase activity Catalysis of the reaction: protein L-arginine + H2O = protein L-citrulline + NH3.
GO:0009446 putrescine biosynthetic process The chemical reactions and pathways resulting in the formation of putrescine, 1,4-diaminobutane; putrescine can be synthesized from arginine or ornithine and is the metabolic precursor of spermidine and spermine.
GO:0047632 agmatine deiminase activity Catalysis of the reaction: agmatine + H2O = N-carbamoylputrescine + NH3.

35 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa007104mg 1 340 + 340 Gaps:8 91.10 382 82.76 0.0 hypothetical protein
blastp_kegg lcl|pmum:103338612 1 340 + 340 Gaps:8 91.10 382 82.47 0.0 agmatine deiminase
blastp_kegg lcl|tcc:TCM_014443 1 340 + 340 Gaps:7 93.03 373 80.40 0.0 Porphyromonas-type peptidyl-arginine deiminase family protein isoform 1
blastp_kegg lcl|cit:102610307 1 340 + 340 Gaps:7 91.08 381 80.69 0.0 agmatine deiminase-like
blastp_kegg lcl|cic:CICLE_v10020592mg 1 340 + 340 Gaps:7 91.08 381 80.12 0.0 hypothetical protein
blastp_kegg lcl|sot:102601245 1 340 + 340 Gaps:7 92.53 375 79.25 0.0 agmatine deiminase-like
blastp_kegg lcl|rcu:RCOM_1619080 2 340 + 339 Gaps:9 91.25 377 80.52 0.0 Agmatine deiminase putative (EC:3.5.3.12)
blastp_kegg lcl|vvi:100249038 1 340 + 340 Gaps:7 92.78 374 80.12 0.0 agmatine deiminase-like
blastp_kegg lcl|pxb:103930164 1 340 + 340 Gaps:8 91.10 382 79.31 0.0 agmatine deiminase-like
blastp_kegg lcl|pxb:103938185 1 340 + 340 Gaps:8 90.16 386 79.60 0.0 agmatine deiminase-like
blastp_pdb 3h7k_A 7 340 + 334 Gaps:7 89.03 383 71.85 0.0 mol:protein length:383 Agmatine deiminase
blastp_pdb 3h7c_X 7 340 + 334 Gaps:7 89.03 383 71.85 0.0 mol:protein length:383 Agmatine deiminase
blastp_pdb 2q3u_B 7 340 + 334 Gaps:7 89.03 383 71.85 0.0 mol:protein length:383 Agmatine deiminase
blastp_pdb 2q3u_A 7 340 + 334 Gaps:7 89.03 383 71.85 0.0 mol:protein length:383 Agmatine deiminase
blastp_pdb 1vkp_B 7 340 + 334 Gaps:7 89.03 383 71.85 0.0 mol:protein length:383 AGMATINE IMINOHYDROLASE
blastp_pdb 1vkp_A 7 340 + 334 Gaps:7 89.03 383 71.85 0.0 mol:protein length:383 AGMATINE IMINOHYDROLASE
blastp_pdb 2ewo_L 7 340 + 334 Gaps:25 88.86 377 46.87 4e-91 mol:protein length:377 Putative agmatine deiminase
blastp_pdb 2ewo_K 7 340 + 334 Gaps:25 88.86 377 46.87 4e-91 mol:protein length:377 Putative agmatine deiminase
blastp_pdb 2ewo_J 7 340 + 334 Gaps:25 88.86 377 46.87 4e-91 mol:protein length:377 Putative agmatine deiminase
blastp_pdb 2ewo_I 7 340 + 334 Gaps:25 88.86 377 46.87 4e-91 mol:protein length:377 Putative agmatine deiminase
blastp_uniprot_sprot sp|Q8GWW7|AGUA_ARATH 7 340 + 334 Gaps:7 89.03 383 71.85 0.0 Agmatine deiminase OS Arabidopsis thaliana GN AIH PE 1 SV 2
blastp_uniprot_sprot sp|Q87UB2|AGUA_PSESM 3 340 + 338 Gaps:19 91.58 368 54.30 3e-123 Agmatine deiminase OS Pseudomonas syringae pv. tomato (strain DC3000) GN aguA PE 3 SV 1
blastp_uniprot_sprot sp|Q4ZLL3|AGUA_PSEU2 3 340 + 338 Gaps:19 91.58 368 54.30 6e-123 Agmatine deiminase OS Pseudomonas syringae pv. syringae (strain B728a) GN aguA PE 3 SV 1
blastp_uniprot_sprot sp|A6UY93|AGUA_PSEA7 7 340 + 334 Gaps:19 90.49 368 55.86 1e-122 Agmatine deiminase OS Pseudomonas aeruginosa (strain PA7) GN aguA PE 3 SV 1
blastp_uniprot_sprot sp|Q48Q55|AGUA_PSE14 3 340 + 338 Gaps:19 91.58 368 53.71 4e-122 Agmatine deiminase OS Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN aguA PE 3 SV 1
blastp_uniprot_sprot sp|A4XP44|AGUA_PSEMY 3 340 + 338 Gaps:19 91.58 368 53.41 4e-121 Agmatine deiminase OS Pseudomonas mendocina (strain ymp) GN aguA PE 3 SV 1
blastp_uniprot_sprot sp|Q2SRJ6|AGUA_MYCCT 3 344 + 342 Gaps:18 92.86 364 52.96 8e-121 Putative agmatine deiminase OS Mycoplasma capricolum subsp. capricolum (strain California kid / ATCC 27343 / NCTC 10154) GN aguA PE 3 SV 1
blastp_uniprot_sprot sp|A5VX45|AGUA_PSEP1 3 340 + 338 Gaps:19 91.58 368 54.60 8e-121 Agmatine deiminase OS Pseudomonas putida (strain F1 / ATCC 700007) GN aguA PE 3 SV 1
blastp_uniprot_sprot sp|B0KI18|AGUA_PSEPG 3 340 + 338 Gaps:19 91.58 368 54.01 7e-120 Agmatine deiminase OS Pseudomonas putida (strain GB-1) GN aguA PE 3 SV 1
blastp_uniprot_sprot sp|Q88R68|AGUA_PSEPK 3 340 + 338 Gaps:19 91.58 368 54.01 1e-119 Agmatine deiminase OS Pseudomonas putida (strain KT2440) GN aguA PE 3 SV 1

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 4 341 338 SSF55909 none none none
PANTHER 7 340 334 PTHR31377 none none none
Pfam 12 340 329 PF04371 "KEGG:00330+3.5.3.12","MetaCyc:PWY-43" Porphyromonas-type peptidyl-arginine deiminase IPR007466
PANTHER 7 340 334 PTHR31377:SF0 none none none
Gene3D 6 341 336 G3DSA:3.75.10.10 none none none
TIGRFAM 7 341 335 TIGR03380 "KEGG:00330+3.5.3.12","MetaCyc:PWY-43" agmatine_aguA: agmatine deiminase IPR017754

0 Localization

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL5_peak_Bud_burst_A4 Qrob_Chr10 10 s_1C8OKQ_688 v_12844_707 25,6 13,9 39,9 lod 2,7 6,1
Bourran2_2002_QTL13_peak_Bud_burst_3P Qrob_Chr10 10 s_1B1AG7_637 s_1A3A1N_709 19,44 0 49,44 lod 3 5,6
Bourran2_2002_QTL15_peak_Bud_burst_A4 Qrob_Chr10 10 v_7579_71 s_1ATZMJ_189 23,94 0 43,64 lod 3,7 5,4
Bourran2_2014_vSeqBC_A4 Qrob_Chr10 10 s_1BAM4E_1326 s_1C0HD0_1012 36,88 7,71 46,03 lod 2,6164 7,3
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
PM_1999_QTL16_peak_Bud_burst_3P Qrob_Chr10 10 s_1B6YNI_505 s_1A1ZO_1322 7,48 0 31,48 lod 4 7,1

0 Targeting