Protein : Qrob_P0133740.2 Q. robur
Protein Identifier  ? Qrob_P0133740.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) 3.5.3.12 - Agmatine deiminase. Code Enzyme  EC:3.5.3.12
Gene Prediction Quality  validated Protein length 

Sequence

Length: 376  
Kegg Orthology  K10536
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0004668 protein-arginine deiminase activity Catalysis of the reaction: protein L-arginine + H2O = protein L-citrulline + NH3.
GO:0009446 putrescine biosynthetic process The chemical reactions and pathways resulting in the formation of putrescine, 1,4-diaminobutane; putrescine can be synthesized from arginine or ornithine and is the metabolic precursor of spermidine and spermine.
GO:0047632 agmatine deiminase activity Catalysis of the reaction: agmatine + H2O = N-carbamoylputrescine + NH3.

35 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa007104mg 1 374 + 374 Gaps:1 98.17 382 84.53 0.0 hypothetical protein
blastp_kegg lcl|pmum:103338612 1 374 + 374 Gaps:1 98.17 382 84.27 0.0 agmatine deiminase
blastp_kegg lcl|cit:102610307 1 374 + 374 none 98.16 381 82.89 0.0 agmatine deiminase-like
blastp_kegg lcl|cic:CICLE_v10020592mg 1 374 + 374 none 98.16 381 82.62 0.0 hypothetical protein
blastp_kegg lcl|tcc:TCM_014443 1 372 + 372 none 99.73 373 82.26 0.0 Porphyromonas-type peptidyl-arginine deiminase family protein isoform 1
blastp_kegg lcl|rcu:RCOM_1619080 2 374 + 373 Gaps:2 98.41 377 82.21 0.0 Agmatine deiminase putative (EC:3.5.3.12)
blastp_kegg lcl|mdm:103420360 1 374 + 374 Gaps:1 97.15 386 81.87 0.0 agmatine deiminase-like
blastp_kegg lcl|mdm:103437935 1 374 + 374 Gaps:1 97.15 386 81.87 0.0 agmatine deiminase
blastp_kegg lcl|vvi:100249038 1 373 + 373 none 99.73 374 81.77 0.0 agmatine deiminase-like
blastp_kegg lcl|pop:POPTR_0015s06560g 7 372 + 366 none 96.32 380 81.69 0.0 hypothetical protein
blastp_pdb 3h7k_A 7 375 + 369 none 96.34 383 73.98 0.0 mol:protein length:383 Agmatine deiminase
blastp_pdb 3h7c_X 7 375 + 369 none 96.34 383 73.98 0.0 mol:protein length:383 Agmatine deiminase
blastp_pdb 2q3u_B 7 375 + 369 none 96.34 383 73.98 0.0 mol:protein length:383 Agmatine deiminase
blastp_pdb 2q3u_A 7 375 + 369 none 96.34 383 73.98 0.0 mol:protein length:383 Agmatine deiminase
blastp_pdb 1vkp_B 7 375 + 369 none 96.34 383 73.98 0.0 mol:protein length:383 AGMATINE IMINOHYDROLASE
blastp_pdb 1vkp_A 7 375 + 369 none 96.34 383 73.98 0.0 mol:protein length:383 AGMATINE IMINOHYDROLASE
blastp_pdb 2ewo_L 7 372 + 366 Gaps:19 95.23 377 49.86 5e-107 mol:protein length:377 Putative agmatine deiminase
blastp_pdb 2ewo_K 7 372 + 366 Gaps:19 95.23 377 49.86 5e-107 mol:protein length:377 Putative agmatine deiminase
blastp_pdb 2ewo_J 7 372 + 366 Gaps:19 95.23 377 49.86 5e-107 mol:protein length:377 Putative agmatine deiminase
blastp_pdb 2ewo_I 7 372 + 366 Gaps:19 95.23 377 49.86 5e-107 mol:protein length:377 Putative agmatine deiminase
blastp_uniprot_sprot sp|Q8GWW7|AGUA_ARATH 7 375 + 369 none 96.34 383 73.98 0.0 Agmatine deiminase OS Arabidopsis thaliana GN AIH PE 1 SV 2
blastp_uniprot_sprot sp|A6UY93|AGUA_PSEA7 7 372 + 366 Gaps:13 97.01 368 59.10 1e-142 Agmatine deiminase OS Pseudomonas aeruginosa (strain PA7) GN aguA PE 3 SV 1
blastp_uniprot_sprot sp|Q87UB2|AGUA_PSESM 3 372 + 370 Gaps:13 98.10 368 57.06 1e-141 Agmatine deiminase OS Pseudomonas syringae pv. tomato (strain DC3000) GN aguA PE 3 SV 1
blastp_uniprot_sprot sp|Q4ZLL3|AGUA_PSEU2 3 372 + 370 Gaps:13 98.10 368 57.06 2e-141 Agmatine deiminase OS Pseudomonas syringae pv. syringae (strain B728a) GN aguA PE 3 SV 1
blastp_uniprot_sprot sp|A4XP44|AGUA_PSEMY 3 372 + 370 Gaps:13 98.10 368 56.79 2e-140 Agmatine deiminase OS Pseudomonas mendocina (strain ymp) GN aguA PE 3 SV 1
blastp_uniprot_sprot sp|Q48Q55|AGUA_PSE14 3 372 + 370 Gaps:13 98.10 368 56.51 2e-140 Agmatine deiminase OS Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN aguA PE 3 SV 1
blastp_uniprot_sprot sp|A5VX45|AGUA_PSEP1 3 372 + 370 Gaps:13 98.10 368 57.62 3e-140 Agmatine deiminase OS Pseudomonas putida (strain F1 / ATCC 700007) GN aguA PE 3 SV 1
blastp_uniprot_sprot sp|B0KI18|AGUA_PSEPG 3 372 + 370 Gaps:13 98.10 368 57.06 3e-139 Agmatine deiminase OS Pseudomonas putida (strain GB-1) GN aguA PE 3 SV 1
blastp_uniprot_sprot sp|Q88R68|AGUA_PSEPK 3 372 + 370 Gaps:13 98.10 368 57.06 4e-139 Agmatine deiminase OS Pseudomonas putida (strain KT2440) GN aguA PE 3 SV 1
blastp_uniprot_sprot sp|C3K5U8|AGUA_PSEFS 3 372 + 370 Gaps:13 98.10 368 56.79 3e-138 Agmatine deiminase OS Pseudomonas fluorescens (strain SBW25) GN aguA PE 3 SV 1

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 4 372 369 SSF55909 none none none
PANTHER 7 372 366 PTHR31377:SF0 none none none
Pfam 12 371 360 PF04371 "KEGG:00330+3.5.3.12","MetaCyc:PWY-43" Porphyromonas-type peptidyl-arginine deiminase IPR007466
TIGRFAM 7 372 366 TIGR03380 "KEGG:00330+3.5.3.12","MetaCyc:PWY-43" agmatine_aguA: agmatine deiminase IPR017754
PANTHER 7 372 366 PTHR31377 none none none
Gene3D 6 372 367 G3DSA:3.75.10.10 none none none

0 Localization

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL5_peak_Bud_burst_A4 Qrob_Chr10 10 s_1C8OKQ_688 v_12844_707 25,6 13,9 39,9 lod 2,7 6,1
Bourran2_2002_QTL13_peak_Bud_burst_3P Qrob_Chr10 10 s_1B1AG7_637 s_1A3A1N_709 19,44 0 49,44 lod 3 5,6
Bourran2_2002_QTL15_peak_Bud_burst_A4 Qrob_Chr10 10 v_7579_71 s_1ATZMJ_189 23,94 0 43,64 lod 3,7 5,4
Bourran2_2014_vSeqBC_A4 Qrob_Chr10 10 s_1BAM4E_1326 s_1C0HD0_1012 36,88 7,71 46,03 lod 2,6164 7,3
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
PM_1999_QTL16_peak_Bud_burst_3P Qrob_Chr10 10 s_1B6YNI_505 s_1A1ZO_1322 7,48 0 31,48 lod 4 7,1

0 Targeting