Protein : Qrob_P0131290.2 Q. robur
Protein Identifier  ? Qrob_P0131290.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=11) PTHR22849//PTHR22849:SF7 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Code Enzyme  EC:6.3.2.19
Gene Prediction Quality  validated Protein length 

Sequence

Length: 387  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0004842 ubiquitin-protein transferase activity Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages.
GO:0016567 protein ubiquitination The process in which one or more ubiquitin groups are added to a protein.
GO:0005488 binding The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.

21 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa019526mg 1 386 + 386 Gaps:29 100.00 403 59.06 3e-167 hypothetical protein
blastp_kegg lcl|mdm:103421753 1 386 + 386 Gaps:29 100.00 403 59.80 6e-166 E3 ubiquitin-protein ligase PUB24-like
blastp_kegg lcl|pop:POPTR_0006s21920g 1 375 + 375 Gaps:23 96.82 409 61.87 3e-165 POPTRDRAFT_561153 hypothetical protein
blastp_kegg lcl|pmum:103339538 1 382 + 382 Gaps:25 98.53 409 58.06 7e-165 E3 ubiquitin-protein ligase PUB24
blastp_kegg lcl|pxb:103940528 1 375 + 375 Gaps:25 98.26 403 60.10 7e-165 E3 ubiquitin-protein ligase PUB24
blastp_kegg lcl|mdm:103454167 1 374 + 374 Gaps:25 98.01 403 60.25 2e-164 E3 ubiquitin-protein ligase PUB24
blastp_kegg lcl|rcu:RCOM_0418900 1 376 + 376 Gaps:25 98.51 403 62.72 1e-163 Spotted leaf protein putative
blastp_kegg lcl|mdm:103414926 1 374 + 374 Gaps:25 98.01 403 60.00 1e-163 E3 ubiquitin-protein ligase PUB24-like
blastp_kegg lcl|pop:POPTR_0016s07020g 1 375 + 375 Gaps:24 96.81 408 59.75 1e-156 POPTRDRAFT_576498 U-box domain-containing family protein
blastp_kegg lcl|tcc:TCM_022960 1 376 + 376 Gaps:27 97.79 408 58.15 1e-150 Plant U-box 24
blastp_uniprot_sprot sp|Q9SF15|PUB24_ARATH 2 376 + 375 Gaps:69 95.18 456 41.71 3e-98 E3 ubiquitin-protein ligase PUB24 OS Arabidopsis thaliana GN PUB24 PE 1 SV 1
blastp_uniprot_sprot sp|Q84TG3|PUB23_ARATH 2 377 + 376 Gaps:34 96.35 411 37.88 8e-77 E3 ubiquitin-protein ligase PUB23 OS Arabidopsis thaliana GN PUB23 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SVC6|PUB22_ARATH 1 377 + 377 Gaps:62 98.16 435 34.66 5e-66 E3 ubiquitin-protein ligase PUB22 OS Arabidopsis thaliana GN PUB22 PE 1 SV 1
blastp_uniprot_sprot sp|Q9FXA4|PUB26_ARATH 4 385 + 382 Gaps:41 97.15 421 25.67 2e-23 U-box domain-containing protein 26 OS Arabidopsis thaliana GN PUB26 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LT79|PUB25_ARATH 4 350 + 347 Gaps:47 87.89 421 26.49 5e-23 U-box domain-containing protein 25 OS Arabidopsis thaliana GN PUB25 PE 2 SV 1
blastp_uniprot_sprot sp|Q9C8D1|PUB20_ARATH 3 377 + 375 Gaps:58 89.79 431 26.36 1e-21 U-box domain-containing protein 20 OS Arabidopsis thaliana GN PUB20 PE 2 SV 1
blastp_uniprot_sprot sp|Q5PNY6|PUB21_ARATH 3 382 + 380 Gaps:52 92.41 435 25.37 4e-16 U-box domain-containing protein 21 OS Arabidopsis thaliana GN PUB21 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LSA6|PUB29_ARATH 4 364 + 361 Gaps:48 92.77 415 25.19 6e-12 U-box domain-containing protein 29 OS Arabidopsis thaliana GN PUB29 PE 1 SV 1
blastp_uniprot_sprot sp|Q9ZV31|PUB12_ARATH 7 371 + 365 Gaps:80 58.26 654 27.03 2e-11 U-box domain-containing protein 12 OS Arabidopsis thaliana GN PUB12 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SNC6|PUB13_ARATH 6 337 + 332 Gaps:73 52.27 660 28.41 6e-11 U-box domain-containing protein 13 OS Arabidopsis thaliana GN PUB13 PE 1 SV 1
rpsblast_cdd gnl|CDD|128780 9 52 + 44 Gaps:21 100.00 63 39.68 1e-07 smart00504 Ubox Modified RING finger domain. Modified RING finger domain without the full complement of Zn2+-binding ligands. Probable involvement in E2-dependent ubiquitination.

8 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 77 363 287 SSF48371 none none IPR016024
PANTHER 4 377 374 PTHR22849:SF7 none none none
Gene3D 86 352 267 G3DSA:1.25.10.10 none none IPR011989
SUPERFAMILY 4 63 60 SSF57850 none none none
PANTHER 4 377 374 PTHR22849 none none none
SMART 9 52 44 SM00504 "UniPathway:UPA00143" Modified RING finger domain IPR003613
Gene3D 5 24 20 G3DSA:3.30.40.10 none none IPR013083
Gene3D 25 56 32 G3DSA:3.30.40.10 none none IPR013083

0 Localization

4 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5

0 Targeting