Protein : Qrob_P0131250.2 Q. robur
Protein Identifier  ? Qrob_P0131250.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=11) PTHR22849//PTHR22849:SF7 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Code Enzyme  EC:6.3.2.19
Gene Prediction Quality  validated Protein length 

Sequence

Length: 372  
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

3 GO Terms

Identifier Name Description
GO:0004842 ubiquitin-protein transferase activity Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages.
GO:0016567 protein ubiquitination The process in which one or more ubiquitin groups are added to a protein.
GO:0005488 binding The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.

33 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0006s21920g 1 360 + 360 Gaps:36 96.82 409 59.60 6e-160 POPTRDRAFT_561153 hypothetical protein
blastp_kegg lcl|mdm:103421753 1 371 + 371 Gaps:42 100.00 403 57.57 2e-153 E3 ubiquitin-protein ligase PUB24-like
blastp_kegg lcl|rcu:RCOM_0418900 1 361 + 361 Gaps:38 98.51 403 59.95 3e-153 Spotted leaf protein putative
blastp_kegg lcl|pop:POPTR_0016s07020g 1 360 + 360 Gaps:37 96.81 408 57.97 9e-153 POPTRDRAFT_576498 U-box domain-containing family protein
blastp_kegg lcl|pper:PRUPE_ppa019526mg 1 371 + 371 Gaps:42 100.00 403 56.33 1e-152 hypothetical protein
blastp_kegg lcl|pmum:103339538 1 367 + 367 Gaps:38 98.53 409 55.58 3e-151 E3 ubiquitin-protein ligase PUB24
blastp_kegg lcl|pxb:103940528 1 360 + 360 Gaps:38 98.26 403 56.57 8e-147 E3 ubiquitin-protein ligase PUB24
blastp_kegg lcl|mdm:103414926 1 359 + 359 Gaps:38 98.01 403 56.71 2e-146 E3 ubiquitin-protein ligase PUB24-like
blastp_kegg lcl|mdm:103454167 1 359 + 359 Gaps:38 98.01 403 56.71 3e-146 E3 ubiquitin-protein ligase PUB24
blastp_kegg lcl|tcc:TCM_022960 1 361 + 361 Gaps:40 97.79 408 56.14 2e-143 Plant U-box 24
blastp_pdb 1t1h_A 5 79 + 75 Gaps:2 93.59 78 46.58 2e-12 mol:protein length:78 armadillo repeat containing protein
blastp_pdb 2oxq_D 5 78 + 74 Gaps:2 90.00 80 38.89 6e-08 mol:protein length:80 STIP1 homology and U-Box containing protein 1
blastp_pdb 2oxq_C 5 78 + 74 Gaps:2 90.00 80 38.89 6e-08 mol:protein length:80 STIP1 homology and U-Box containing protein 1
blastp_pdb 2f42_A 5 79 + 75 Gaps:2 40.78 179 38.36 1e-07 mol:protein length:179 STIP1 homology and U-box containing protein 1
blastp_pdb 2c2v_V 5 79 + 75 Gaps:2 93.59 78 35.62 3e-07 mol:protein length:78 CARBOXY TERMINUS OF HSP70-INTERACTING PROTEIN
blastp_pdb 2c2v_U 5 79 + 75 Gaps:2 93.59 78 35.62 3e-07 mol:protein length:78 CARBOXY TERMINUS OF HSP70-INTERACTING PROTEIN
blastp_pdb 2c2v_T 5 79 + 75 Gaps:2 93.59 78 35.62 3e-07 mol:protein length:78 CARBOXY TERMINUS OF HSP70-INTERACTING PROTEIN
blastp_pdb 2c2v_S 5 79 + 75 Gaps:2 93.59 78 35.62 3e-07 mol:protein length:78 CARBOXY TERMINUS OF HSP70-INTERACTING PROTEIN
blastp_pdb 2c2l_D 5 79 + 75 Gaps:2 25.98 281 35.62 1e-06 mol:protein length:281 CARBOXY TERMINUS OF HSP70-INTERACTING PROTEIN
blastp_pdb 2c2l_C 5 79 + 75 Gaps:2 25.98 281 35.62 1e-06 mol:protein length:281 CARBOXY TERMINUS OF HSP70-INTERACTING PROTEIN
blastp_uniprot_sprot sp|Q84TG3|PUB23_ARATH 2 360 + 359 Gaps:47 95.86 411 37.06 9e-74 E3 ubiquitin-protein ligase PUB23 OS Arabidopsis thaliana GN PUB23 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SF15|PUB24_ARATH 2 361 + 360 Gaps:98 95.18 456 34.10 2e-56 E3 ubiquitin-protein ligase PUB24 OS Arabidopsis thaliana GN PUB24 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SVC6|PUB22_ARATH 1 360 + 360 Gaps:97 97.70 435 32.24 2e-43 E3 ubiquitin-protein ligase PUB22 OS Arabidopsis thaliana GN PUB22 PE 1 SV 1
blastp_uniprot_sprot sp|Q9LT79|PUB25_ARATH 4 323 + 320 Gaps:68 87.41 421 29.35 2e-32 U-box domain-containing protein 25 OS Arabidopsis thaliana GN PUB25 PE 2 SV 1
blastp_uniprot_sprot sp|Q9C8D1|PUB20_ARATH 3 362 + 360 Gaps:41 89.79 431 28.68 7e-32 U-box domain-containing protein 20 OS Arabidopsis thaliana GN PUB20 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FXA4|PUB26_ARATH 4 146 + 143 Gaps:10 34.92 421 45.58 7e-28 U-box domain-containing protein 26 OS Arabidopsis thaliana GN PUB26 PE 2 SV 1
blastp_uniprot_sprot sp|Q5PNY6|PUB21_ARATH 3 367 + 365 Gaps:59 92.41 435 27.11 3e-25 U-box domain-containing protein 21 OS Arabidopsis thaliana GN PUB21 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LSA6|PUB29_ARATH 4 349 + 346 Gaps:45 92.77 415 24.68 2e-18 U-box domain-containing protein 29 OS Arabidopsis thaliana GN PUB29 PE 1 SV 1
blastp_uniprot_sprot sp|Q9FLF4|PUB27_ARATH 4 349 + 346 Gaps:75 93.10 420 24.55 1e-15 U-box domain-containing protein 27 OS Arabidopsis thaliana GN PUB27 PE 2 SV 1
blastp_uniprot_sprot sp|Q9C7R6|PUB17_ARATH 4 136 + 133 Gaps:17 20.03 729 34.93 2e-14 U-box domain-containing protein 17 OS Arabidopsis thaliana GN PUB17 PE 2 SV 1

11 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 6 78 73 PF04564 "UniPathway:UPA00143" U-box domain IPR003613
PANTHER 4 362 359 PTHR22849:SF7 none none none
PANTHER 4 362 359 PTHR22849 none none none
SMART 9 74 66 SM00504 "UniPathway:UPA00143" Modified RING finger domain IPR003613
SUPERFAMILY 104 194 91 SSF48371 none none IPR016024
SUPERFAMILY 246 334 89 SSF48371 none none IPR016024
SUPERFAMILY 4 78 75 SSF57850 none none none
Gene3D 100 167 68 G3DSA:1.25.10.10 none none IPR011989
Gene3D 220 348 129 G3DSA:1.25.10.10 none none IPR011989
ProSiteProfiles 5 81 77 PS51698 "UniPathway:UPA00143" U-box domain profile. IPR003613
Gene3D 5 78 74 G3DSA:3.30.40.10 none none IPR013083

0 Localization

4 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5

0 Targeting