2 GO Terms
Identifier | Name | Description |
---|---|---|
GO:0031072 | heat shock protein binding | Interacting selectively and non-covalently with a heat shock protein, any protein synthesized or activated in response to heat shock. |
GO:0051082 | unfolded protein binding | Interacting selectively and non-covalently with an unfolded protein. |
14 Blast
Analysis | Hit | Start | End | Strand | Length | Note | Hit Coverage | Hit Length | Hit Pident | E Val | Hit Description |
---|---|---|---|---|---|---|---|---|---|---|---|
blastp_kegg | lcl|rcu:RCOM_0085710 | 1 | 432 | + | 432 | Gaps:6 | 100.00 | 426 | 84.51 | 0.0 | hypothetical protein |
blastp_kegg | lcl|vvi:100249497 | 1 | 432 | + | 432 | Gaps:6 | 98.61 | 432 | 81.46 | 0.0 | uncharacterized LOC100249497 |
blastp_kegg | lcl|pper:PRUPE_ppa006126mg | 1 | 432 | + | 432 | Gaps:6 | 100.00 | 426 | 83.57 | 0.0 | hypothetical protein |
blastp_kegg | lcl|fve:101314766 | 1 | 432 | + | 432 | Gaps:6 | 100.00 | 426 | 80.99 | 0.0 | protein SSUH2 homolog |
blastp_kegg | lcl|pxb:103949446 | 1 | 432 | + | 432 | Gaps:5 | 100.00 | 427 | 80.56 | 0.0 | protein SSUH2 homolog |
blastp_kegg | lcl|tcc:TCM_021782 | 28 | 432 | + | 405 | Gaps:2 | 95.05 | 424 | 82.13 | 0.0 | Chaperone protein dnaJ-related |
blastp_kegg | lcl|pmum:103338358 | 1 | 432 | + | 432 | Gaps:6 | 100.00 | 426 | 83.10 | 0.0 | protein SSUH2 homolog |
blastp_kegg | lcl|cic:CICLE_v10011790mg | 1 | 432 | + | 432 | Gaps:8 | 100.00 | 428 | 78.27 | 0.0 | hypothetical protein |
blastp_kegg | lcl|cit:102630858 | 1 | 432 | + | 432 | Gaps:8 | 100.00 | 428 | 78.04 | 0.0 | protein SSUH2 homolog |
blastp_kegg | lcl|cam:101489819 | 1 | 432 | + | 432 | Gaps:10 | 100.00 | 424 | 78.07 | 0.0 | protein SSUH2 homolog |
blastp_uniprot_sprot | sp|Q9Y2M2|SSUH2_HUMAN | 108 | 422 | + | 315 | Gaps:21 | 84.42 | 353 | 29.53 | 4e-28 | Protein SSUH2 homolog OS Homo sapiens GN SSUH2 PE 1 SV 1 |
blastp_uniprot_sprot | sp|Q8C3L1|SSUH2_MOUSE | 114 | 335 | + | 222 | Gaps:17 | 60.29 | 340 | 27.80 | 7e-16 | Protein SSUH2 homolog OS Mus musculus GN Ssuh2 PE 2 SV 1 |
rpsblast_cdd | gnl|CDD|172778 | 166 | 273 | + | 108 | Gaps:21 | 32.60 | 365 | 29.41 | 3e-07 | PRK14290 PRK14290 chaperone protein DnaJ Provisional. |
rpsblast_kog | gnl|CDD|38024 | 27 | 431 | + | 405 | Gaps:21 | 96.55 | 406 | 27.30 | 1e-108 | KOG2813 KOG2813 KOG2813 Predicted molecular chaperone contains DnaJ domain [Posttranslational modification protein turnover chaperones]. |
3 Domain Motifs
Analysis | Begin | End | Length | Domain Identifier | Cross Ref | Description | Inter Pro |
---|---|---|---|---|---|---|---|
Gene3D | 239 | 296 | 58 | G3DSA:2.10.230.10 | none | none | IPR001305 |
PANTHER | 104 | 427 | 324 | PTHR15852:SF10 | none | none | none |
PANTHER | 104 | 427 | 324 | PTHR15852 | none | none | none |
4 Qtllist
Qtl Name | Chromosome Name | Linkage Group | Prox Marker | Dist Marker | Position QTL | Pos One | Pos Two | Test Type | Test Value | R 2 |
---|---|---|---|---|---|---|---|---|---|---|
Bourran2_2014_nSecLBD_A4 | Qrob_Chr07 | 7 | v_8327_222 | s_1A4WGY_363 | 16,04 | 0 | 44,69 | lod | 2,6373 | 6,5 |
Bourran2_2015_nSeqBC_3P | Qrob_Chr11 | 11 | s_1DG9PM_867 | s_1BZ083_1312 | 26,06 | 25,47 | 27,72 | lod | 3.6 | 7.1 |
Bourran2_2015_nEpis_A4 | Qrob_Chr09 | 9 | v_15847_485 | v_8329_369 | 34,94 | 34,88 | 37,45 | lod | 3.1 | 7 |
Bourran2_2015_nEpiBC_A4 | Qrob_Chr07 | 7 | s_1DP9TW_798 | v_8128_173 | 22,61 | 22,14 | 22,73 | lod | 3.1 | 8.5 |