Protein : Qrob_P0128700.2 Q. robur
Protein Identifier  ? Qrob_P0128700.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) K14766 - nucleolar protein 14 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 480  
Kegg Orthology  K14766
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0032040 small-subunit processome A large ribonucleoprotein complex that is an early preribosomal complex. In S. cerevisiae, it has a size of 80S and consists of the 35S pre-rRNA, early-associating ribosomal proteins most of which are part of the small ribosomal subunit, the U3 snoRNA and associated proteins.

18 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100254292 15 433 + 419 Gaps:124 54.98 973 42.99 2e-83 nucleolar protein 14-like
blastp_kegg lcl|rcu:RCOM_0853170 63 433 + 371 Gaps:79 49.25 865 48.36 7e-76 nop14 putative
blastp_kegg lcl|crb:CARUB_v10019758mg 13 438 + 426 Gaps:82 52.44 900 42.16 2e-63 hypothetical protein
blastp_kegg lcl|tcc:TCM_011472 17 444 + 428 Gaps:17 46.39 983 57.24 7e-59 Nop14 putative isoform 1
blastp_kegg lcl|aly:ARALYDRAFT_339148 16 438 + 423 Gaps:75 52.16 901 39.79 1e-56 hypothetical protein
blastp_kegg lcl|brp:103852551 3 422 + 420 Gaps:72 51.77 904 42.95 5e-55 nucleolar protein 14
blastp_kegg lcl|pper:PRUPE_ppa000919mg 16 221 + 206 Gaps:5 21.31 962 56.10 1e-48 hypothetical protein
blastp_kegg lcl|ath:AT1G69070 16 438 + 423 Gaps:72 52.50 901 39.75 1e-45 hypothetical protein
blastp_kegg lcl|mdm:103451745 16 221 + 206 Gaps:13 21.39 921 55.84 1e-45 nucleolar protein 14-like
blastp_kegg lcl|fve:101303505 19 422 + 404 Gaps:12 38.13 952 62.53 1e-45 nucleolar protein 14-like
blastp_uniprot_sprot sp|Q9VEJ2|NOP14_DROME 9 242 + 234 Gaps:61 32.51 852 32.85 1e-14 Nucleolar protein 14 homolog OS Drosophila melanogaster GN l(3)07882 PE 2 SV 2
blastp_uniprot_sprot sp|O43051|NOP14_SCHPO 31 255 + 225 Gaps:81 34.82 827 29.51 7e-14 Probable nucleolar complex protein 14 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN nop14 PE 1 SV 1
blastp_uniprot_sprot sp|Q8R3N1|NOP14_MOUSE 30 203 + 174 Gaps:12 19.30 860 34.94 7e-12 Nucleolar protein 14 OS Mus musculus GN Nop14 PE 1 SV 2
blastp_uniprot_sprot sp|P78316|NOP14_HUMAN 31 257 + 227 Gaps:32 25.55 857 34.70 1e-11 Nucleolar protein 14 OS Homo sapiens GN NOP14 PE 1 SV 3
blastp_uniprot_sprot sp|Q75A47|NOP14_ASHGO 4 240 + 237 Gaps:66 35.86 806 28.37 1e-06 Probable nucleolar complex protein 14 OS Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN NOP14 PE 3 SV 1
rpsblast_cdd gnl|CDD|202909 29 422 + 394 Gaps:25 48.33 809 29.41 2e-35 pfam04147 Nop14 Nop14-like family. Emg1 and Nop14 are novel proteins whose interaction is required for the maturation of the 18S rRNA and for 40S ribosome production.
rpsblast_cdd gnl|CDD|34868 123 468 + 346 Gaps:76 7.78 4600 23.46 3e-07 COG5271 MDN1 AAA ATPase containing von Willebrand factor type A (vWA) domain [General function prediction only].
rpsblast_kog gnl|CDD|37358 3 422 + 420 Gaps:26 47.87 823 26.90 1e-35 KOG2147 KOG2147 KOG2147 Nucleolar protein involved in 40S ribosome biogenesis [Translation ribosomal structure and biogenesis].

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Coils 222 243 22 Coil none none none
PANTHER 1 422 422 PTHR23183:SF0 none none none
PANTHER 1 422 422 PTHR23183 none none IPR007276
Pfam 28 166 139 PF04147 none Nop14-like family IPR007276
Pfam 168 422 255 PF04147 none Nop14-like family IPR007276

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

0 Targeting