Protein : Qrob_P0127000.2 Q. robur
Protein Identifier  ? Qrob_P0127000.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=4) K03238 - translation initiation factor eIF-2 beta subunit Gene Prediction Quality  validated
Protein length 

Sequence

Length: 102  
Kegg Orthology  K03238
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0003743 translation initiation factor activity Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide.
GO:0006413 translational initiation The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA.

38 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cmo:103500512 1 101 + 101 none 37.41 270 99.01 3e-67 eukaryotic translation initiation factor 2 subunit beta
blastp_kegg lcl|cam:101495289 1 101 + 101 none 37.55 269 99.01 3e-67 eukaryotic translation initiation factor 2 subunit beta-like
blastp_kegg lcl|csv:101220978 1 101 + 101 none 37.55 269 99.01 4e-67 eukaryotic translation initiation factor 2 subunit beta-like
blastp_kegg lcl|pxb:103946091 1 101 + 101 none 37.27 271 98.02 4e-67 eukaryotic translation initiation factor 2 subunit beta
blastp_kegg lcl|mdm:103427089 1 101 + 101 none 37.27 271 98.02 5e-67 eukaryotic translation initiation factor 2 subunit beta
blastp_kegg lcl|pmum:103338691 1 101 + 101 none 37.27 271 98.02 5e-67 eukaryotic translation initiation factor 2 subunit beta
blastp_kegg lcl|pxb:103963310 1 101 + 101 none 37.27 271 98.02 6e-67 eukaryotic translation initiation factor 2 subunit beta-like
blastp_kegg lcl|mdm:103422639 1 101 + 101 none 37.27 271 98.02 6e-67 eukaryotic translation initiation factor 2 subunit beta
blastp_kegg lcl|pper:PRUPE_ppa009930mg 1 101 + 101 none 37.27 271 98.02 8e-67 hypothetical protein
blastp_kegg lcl|tcc:TCM_024370 1 101 + 101 none 38.26 264 97.03 2e-66 Eukaryotic translation initiation factor 2 subunit beta
blastp_pdb 2dcu_B 1 83 + 83 Gaps:1 55.41 148 45.12 7e-21 mol:protein length:148 Translation initiation factor 2 beta subunit
blastp_pdb 2d74_B 1 83 + 83 Gaps:1 55.41 148 45.12 7e-21 mol:protein length:148 Translation initiation factor 2 beta subunit
blastp_pdb 1nee_A 1 87 + 87 Gaps:4 60.14 138 43.37 3e-16 mol:protein length:138 Probable translation initiation factor 2 beta
blastp_pdb 3v11_C 1 86 + 86 none 62.32 138 34.88 4e-15 mol:protein length:138 Translation initiation factor 2 subunit beta
blastp_pdb 2qmu_C 1 86 + 86 none 62.32 138 34.88 4e-15 mol:protein length:138 Translation initiation factor 2 beta subunit
blastp_pdb 3cw2_N 1 86 + 86 none 61.87 139 34.88 4e-15 mol:protein length:139 Translation initiation factor 2 subunit beta
blastp_pdb 3cw2_M 1 86 + 86 none 61.87 139 34.88 4e-15 mol:protein length:139 Translation initiation factor 2 subunit beta
blastp_pdb 3cw2_L 1 86 + 86 none 61.87 139 34.88 4e-15 mol:protein length:139 Translation initiation factor 2 subunit beta
blastp_pdb 3cw2_K 1 86 + 86 none 61.87 139 34.88 4e-15 mol:protein length:139 Translation initiation factor 2 subunit beta
blastp_pdb 2nxu_A 1 86 + 86 none 58.90 146 34.88 5e-15 mol:protein length:146 Translation initiation factor 2 beta subunit
blastp_uniprot_sprot sp|P55871|IF2B_MALDO 1 101 + 101 none 37.27 271 96.04 1e-66 Eukaryotic translation initiation factor 2 subunit beta OS Malus domestica PE 2 SV 2
blastp_uniprot_sprot sp|O24473|IF2B_WHEAT 1 101 + 101 none 37.41 270 89.11 1e-61 Eukaryotic translation initiation factor 2 subunit beta OS Triticum aestivum PE 1 SV 1
blastp_uniprot_sprot sp|Q41969|IF2B_ARATH 1 99 + 99 none 36.94 268 88.89 3e-60 Eukaryotic translation initiation factor 2 subunit beta OS Arabidopsis thaliana GN EMB1401 PE 2 SV 3
blastp_uniprot_sprot sp|P56329|IF2B_SCHPO 1 97 + 97 none 30.22 321 63.92 5e-41 Probable eukaryotic translation initiation factor 2 subunit beta OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN tif212 PE 1 SV 2
blastp_uniprot_sprot sp|P41375|IF2B_DROME 1 99 + 99 none 31.73 312 62.63 7e-41 Eukaryotic translation initiation factor 2 subunit 2 OS Drosophila melanogaster GN eIF-2beta PE 1 SV 1
blastp_uniprot_sprot sp|Q5E9D0|IF2B_BOVIN 1 97 + 97 none 29.13 333 63.92 1e-39 Eukaryotic translation initiation factor 2 subunit 2 OS Bos taurus GN EIF2S2 PE 2 SV 1
blastp_uniprot_sprot sp|Q99L45|IF2B_MOUSE 1 97 + 97 none 29.31 331 62.89 5e-39 Eukaryotic translation initiation factor 2 subunit 2 OS Mus musculus GN Eif2s2 PE 1 SV 1
blastp_uniprot_sprot sp|P41035|IF2B_RABIT 1 97 + 97 none 29.13 333 62.89 5e-39 Eukaryotic translation initiation factor 2 subunit 2 OS Oryctolagus cuniculus GN EIF2S2 PE 1 SV 1
blastp_uniprot_sprot sp|P20042|IF2B_HUMAN 1 97 + 97 none 29.13 333 62.89 5e-39 Eukaryotic translation initiation factor 2 subunit 2 OS Homo sapiens GN EIF2S2 PE 1 SV 2
blastp_uniprot_sprot sp|Q5R4T9|IF2B_PONAB 1 97 + 97 none 29.13 333 61.86 2e-38 Eukaryotic translation initiation factor 2 subunit 2 OS Pongo abelii GN EIF2S2 PE 2 SV 1

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 50 85 36 SSF75689 none none IPR016190
SMART 1 80 80 SM00653 none domain present in translation initiation factor eIF2B and eIF5 IPR002735
PANTHER 1 97 97 PTHR23001 none none none
SUPERFAMILY 1 53 53 SSF100966 none none IPR016189
Gene3D 1 32 32 G3DSA:3.30.30.50 none none IPR016189
Pfam 1 80 80 PF01873 none Domain found in IF2B/IF5 IPR002735

0 Localization

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 21   Secretory pathway 5 0.482 0.092 NON-PLANT 21