Protein : Qrob_P0126990.2 Q. robur
Protein Identifier  ? Qrob_P0126990.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=4) K03238 - translation initiation factor eIF-2 beta subunit Gene Prediction Quality  validated
Protein length 

Sequence

Length: 170  
Kegg Orthology  K03238
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0003743 translation initiation factor activity Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide.
GO:0006413 translational initiation The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA.

23 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100263785 1 169 + 169 Gaps:1 62.45 269 84.52 5e-85 eukaryotic translation initiation factor 2 subunit beta-like
blastp_kegg lcl|pop:POPTR_0019s15180g 1 169 + 169 Gaps:5 62.73 271 81.18 1e-80 POPTRDRAFT_574465 Eukaryotic translation initiation factor 2 beta subunit family protein
blastp_kegg lcl|mdm:103447259 1 169 + 169 Gaps:3 100.00 170 81.18 1e-79 eukaryotic translation initiation factor 2 subunit beta-like
blastp_kegg lcl|cmo:103500512 4 169 + 166 Gaps:1 61.85 270 81.44 2e-79 eukaryotic translation initiation factor 2 subunit beta
blastp_kegg lcl|cit:102610441 9 169 + 161 Gaps:3 54.36 298 85.80 2e-79 eukaryotic translation initiation factor 2 subunit beta-like
blastp_kegg lcl|pop:POPTR_0013s15430g 1 169 + 169 Gaps:4 62.59 270 81.07 6e-79 POPTRDRAFT_834674 Eukaryotic translation initiation factor 2 beta subunit family protein
blastp_kegg lcl|mdm:103412764 1 169 + 169 Gaps:3 67.46 252 81.76 7e-79 eukaryotic translation initiation factor 2 subunit beta
blastp_kegg lcl|gmx:100783618 4 169 + 166 Gaps:1 58.93 280 80.61 7e-79 eukaryotic translation initiation factor 2 subunit beta-like
blastp_kegg lcl|pper:PRUPE_ppa009930mg 1 169 + 169 Gaps:3 62.73 271 83.53 8e-79 hypothetical protein
blastp_kegg lcl|mdm:103422639 1 169 + 169 Gaps:3 62.73 271 81.76 1e-78 eukaryotic translation initiation factor 2 subunit beta
blastp_uniprot_sprot sp|P55871|IF2B_MALDO 1 169 + 169 Gaps:3 62.73 271 77.65 2e-75 Eukaryotic translation initiation factor 2 subunit beta OS Malus domestica PE 2 SV 2
blastp_uniprot_sprot sp|Q41969|IF2B_ARATH 1 169 + 169 Gaps:4 63.06 268 71.60 7e-67 Eukaryotic translation initiation factor 2 subunit beta OS Arabidopsis thaliana GN EMB1401 PE 2 SV 3
blastp_uniprot_sprot sp|O24473|IF2B_WHEAT 1 169 + 169 Gaps:4 62.59 270 72.19 2e-65 Eukaryotic translation initiation factor 2 subunit beta OS Triticum aestivum PE 1 SV 1
blastp_uniprot_sprot sp|Q99L45|IF2B_MOUSE 90 168 + 79 Gaps:4 25.08 331 57.83 5e-24 Eukaryotic translation initiation factor 2 subunit 2 OS Mus musculus GN Eif2s2 PE 1 SV 1
blastp_uniprot_sprot sp|Q5E9D0|IF2B_BOVIN 79 168 + 90 Gaps:1 27.33 333 53.85 3e-23 Eukaryotic translation initiation factor 2 subunit 2 OS Bos taurus GN EIF2S2 PE 2 SV 1
blastp_uniprot_sprot sp|Q5R4T9|IF2B_PONAB 79 168 + 90 Gaps:1 27.33 333 53.85 4e-23 Eukaryotic translation initiation factor 2 subunit 2 OS Pongo abelii GN EIF2S2 PE 2 SV 1
blastp_uniprot_sprot sp|P41035|IF2B_RABIT 79 168 + 90 Gaps:1 27.33 333 53.85 5e-23 Eukaryotic translation initiation factor 2 subunit 2 OS Oryctolagus cuniculus GN EIF2S2 PE 1 SV 1
blastp_uniprot_sprot sp|P20042|IF2B_HUMAN 79 168 + 90 Gaps:1 27.33 333 53.85 5e-23 Eukaryotic translation initiation factor 2 subunit 2 OS Homo sapiens GN EIF2S2 PE 1 SV 2
blastp_uniprot_sprot sp|Q54T27|IF2B_DICDI 103 169 + 67 Gaps:1 20.82 317 53.03 9e-20 Eukaryotic translation initiation factor 2 subunit 2 OS Dictyostelium discoideum GN eif2s2 PE 3 SV 1
blastp_uniprot_sprot sp|P41375|IF2B_DROME 109 169 + 61 Gaps:1 19.87 312 62.90 2e-18 Eukaryotic translation initiation factor 2 subunit 2 OS Drosophila melanogaster GN eIF-2beta PE 1 SV 1
rpsblast_cdd gnl|CDD|145177 130 169 + 40 Gaps:1 32.80 125 48.78 2e-10 pfam01873 eIF-5_eIF-2B Domain found in IF2B/IF5. This family includes the N terminus of eIF-5 and the C terminus of eIF-2 beta. This region corresponds to the whole of the archaebacterial eIF-2 beta homologue. The region contains a putative zinc binding C4 finger.
rpsblast_cdd gnl|CDD|128901 140 169 + 30 none 27.27 110 60.00 7e-10 smart00653 eIF2B_5 domain present in translation initiation factor eIF2B and eIF5.
rpsblast_kog gnl|CDD|37979 36 169 + 134 Gaps:3 56.71 231 49.62 3e-30 KOG2768 KOG2768 KOG2768 Translation initiation factor 2 beta subunit (eIF-2beta) [Translation ribosomal structure and biogenesis].

4 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 131 169 39 PF01873 none Domain found in IF2B/IF5 IPR002735
PANTHER 3 169 167 PTHR23001 none none none
SUPERFAMILY 115 168 54 SSF100966 none none IPR016189
Gene3D 150 169 20 G3DSA:3.30.30.50 none none IPR016189

0 Localization

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6

0 Targeting