Protein : Qrob_P0126940.2 Q. robur
Protein Identifier  ? Qrob_P0126940.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) K03063 - 26S proteasome regulatory subunit T3 Code Enzyme  EC:3.6.4.8
Gene Prediction Quality  validated Protein length 

Sequence

Length: 404  
Kegg Orthology  K03063
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0005737 cytoplasm All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
GO:0016787 hydrolase activity Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
GO:0030163 protein catabolic process The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds.

50 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103338296 1 387 + 387 Gaps:6 91.19 420 94.52 0.0 26S protease regulatory subunit 6B homolog
blastp_kegg lcl|pper:PRUPE_ppa006246mg 1 387 + 387 Gaps:6 91.19 420 94.52 0.0 hypothetical protein
blastp_kegg lcl|cmo:103496251 1 387 + 387 Gaps:6 91.15 418 94.49 0.0 26S protease regulatory subunit 6B homolog
blastp_kegg lcl|csv:101221619 1 387 + 387 Gaps:6 91.15 418 94.23 0.0 26S protease regulatory subunit 6B homolog
blastp_kegg lcl|csv:101223988 1 387 + 387 Gaps:6 91.15 418 93.96 0.0 26S protease regulatory subunit 6B homolog
blastp_kegg lcl|gmx:100783650 1 387 + 387 Gaps:8 91.23 422 93.51 0.0 26S protease regulatory subunit 6B homolog
blastp_kegg lcl|mdm:103447255 1 387 + 387 Gaps:6 91.19 420 93.21 0.0 26S protease regulatory subunit 6B homolog
blastp_kegg lcl|pxb:103946218 1 387 + 387 Gaps:6 91.19 420 93.21 0.0 26S protease regulatory subunit 6B homolog
blastp_kegg lcl|mdm:103429864 1 375 + 375 Gaps:1 99.21 379 94.41 0.0 26S protease regulatory subunit 6B homolog
blastp_kegg lcl|pxb:103963319 1 387 + 387 Gaps:6 91.19 420 92.95 0.0 26S protease regulatory subunit 6B homolog
blastp_pdb 3h4m_C 159 377 + 219 none 76.84 285 60.73 2e-90 mol:protein length:285 Proteasome-activating nucleotidase
blastp_pdb 3h4m_B 159 377 + 219 none 76.84 285 60.73 2e-90 mol:protein length:285 Proteasome-activating nucleotidase
blastp_pdb 3h4m_A 159 377 + 219 none 76.84 285 60.73 2e-90 mol:protein length:285 Proteasome-activating nucleotidase
blastp_pdb 3hu2_F 162 362 + 201 Gaps:3 40.49 489 51.01 6e-57 mol:protein length:489 Transitional endoplasmic reticulum ATPase
blastp_pdb 3hu2_E 162 362 + 201 Gaps:3 40.49 489 51.01 6e-57 mol:protein length:489 Transitional endoplasmic reticulum ATPase
blastp_pdb 3hu2_D 162 362 + 201 Gaps:3 40.49 489 51.01 6e-57 mol:protein length:489 Transitional endoplasmic reticulum ATPase
blastp_pdb 3hu2_C 162 362 + 201 Gaps:3 40.49 489 51.01 6e-57 mol:protein length:489 Transitional endoplasmic reticulum ATPase
blastp_pdb 3hu2_B 162 362 + 201 Gaps:3 40.49 489 51.01 6e-57 mol:protein length:489 Transitional endoplasmic reticulum ATPase
blastp_pdb 3hu2_A 162 362 + 201 Gaps:3 40.49 489 51.01 6e-57 mol:protein length:489 Transitional endoplasmic reticulum ATPase
blastp_pdb 3hu3_B 162 362 + 201 Gaps:3 40.49 489 51.01 7e-57 mol:protein length:489 Transitional endoplasmic reticulum ATPase
blastp_uniprot_sprot sp|Q9SEI4|PRS6B_ARATH 2 387 + 386 Gaps:19 89.95 408 93.46 0.0 26S protease regulatory subunit 6B homolog OS Arabidopsis thaliana GN RPT3 PE 1 SV 1
blastp_uniprot_sprot sp|P54778|PRS6B_SOLTU 3 387 + 385 Gaps:12 90.80 413 91.47 0.0 26S protease regulatory subunit 6B homolog OS Solanum tuberosum PE 1 SV 1
blastp_uniprot_sprot sp|P85200|PRS6B_HELAN 35 387 + 353 Gaps:5 84.06 414 95.40 0.0 26S protease regulatory subunit 6B homolog OS Helianthus annuus PE 1 SV 1
blastp_uniprot_sprot sp|Q63570|PRS6B_RAT 18 387 + 370 Gaps:6 87.56 418 80.05 0.0 26S protease regulatory subunit 6B OS Rattus norvegicus GN Psmc4 PE 1 SV 1
blastp_uniprot_sprot sp|P54775|PRS6B_MOUSE 18 387 + 370 Gaps:6 87.56 418 80.05 0.0 26S protease regulatory subunit 6B OS Mus musculus GN Psmc4 PE 1 SV 2
blastp_uniprot_sprot sp|Q4R7L3|PRS6B_MACFA 18 387 + 370 Gaps:6 87.56 418 80.05 0.0 26S protease regulatory subunit 6B OS Macaca fascicularis GN PSMC4 PE 2 SV 1
blastp_uniprot_sprot sp|P43686|PRS6B_HUMAN 18 387 + 370 Gaps:6 87.56 418 80.05 0.0 26S protease regulatory subunit 6B OS Homo sapiens GN PSMC4 PE 1 SV 2
blastp_uniprot_sprot sp|Q3T030|PRS6B_BOVIN 18 387 + 370 Gaps:6 87.56 418 80.05 0.0 26S protease regulatory subunit 6B OS Bos taurus GN PSMC4 PE 2 SV 1
blastp_uniprot_sprot sp|P46507|PRS6B_MANSE 16 387 + 372 Gaps:14 86.27 415 81.28 0.0 26S protease regulatory subunit 6B OS Manduca sexta PE 2 SV 1
blastp_uniprot_sprot sp|P34123|PRS6B_DICDI 38 387 + 350 Gaps:5 85.61 403 81.74 0.0 26S protease regulatory subunit 6B homolog OS Dictyostelium discoideum GN psmC4 PE 1 SV 1

9 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSitePatterns 306 324 19 PS00674 none AAA-protein family signature. IPR003960
Gene3D 159 367 209 G3DSA:3.40.50.300 none none IPR027417
PANTHER 25 375 351 PTHR23073 none none none
PANTHER 25 375 351 PTHR23073:SF8 none none none
SMART 199 338 140 SM00382 none ATPases associated with a variety of cellular activities IPR003593
TIGRFAM 47 375 329 TIGR01242 "Reactome:REACT_11045","Reactome:REACT_13","Reactome:REACT_13635","Reactome:REACT_152","Reactome:REACT_1538","Reactome:REACT_383","Reactome:REACT_578","Reactome:REACT_6185","Reactome:REACT_6850" 26Sp45: 26S proteasome subunit P45 family IPR005937
SUPERFAMILY 161 374 214 SSF52540 none none IPR027417
Coils 59 87 29 Coil none none none
Pfam 203 336 134 PF00004 none ATPase family associated with various cellular activities (AAA) IPR003959

0 Localization

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6

0 Targeting