Protein : Qrob_P0126760.2 Q. robur
Protein Identifier  ? Qrob_P0126760.2 Organism . Name  Quercus robur
Score  95.1 Score Type  egn
Protein Description  (M=6) PTHR12302 - EBNA2 BINDING PROTEIN P100 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 293  
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0000166 nucleotide binding Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
GO:0004812 aminoacyl-tRNA ligase activity Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of diphosphate and AMP.
GO:0006418 tRNA aminoacylation for protein translation The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis.

14 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0008s07470g 1 290 + 290 none 86.57 335 74.14 2e-155 POPTRDRAFT_564092 Ca(2+)-dependent nuclease family protein
blastp_kegg lcl|tcc:TCM_042417 1 290 + 290 none 86.57 335 74.48 2e-155 Uncharacterized protein isoform 1
blastp_kegg lcl|rcu:RCOM_0688330 1 290 + 290 none 86.57 335 73.10 3e-155 hypothetical protein
blastp_kegg lcl|pop:POPTR_0010s18970g 1 290 + 290 none 86.57 335 72.41 3e-150 POPTRDRAFT_567200 Ca(2+)-dependent nuclease family protein
blastp_kegg lcl|vvi:100265624 1 284 + 284 Gaps:1 84.73 334 73.50 3e-150 uncharacterized LOC100265624
blastp_kegg lcl|gmx:100795618 1 290 + 290 none 86.57 335 71.38 4e-150 uncharacterized LOC100795618
blastp_kegg lcl|cit:102630573 1 284 + 284 Gaps:1 84.82 336 72.28 4e-148 uncharacterized LOC102630573
blastp_kegg lcl|pvu:PHAVU_008G219500g 1 290 + 290 none 86.57 335 70.69 7e-148 hypothetical protein
blastp_kegg lcl|fve:101294215 1 284 + 284 Gaps:1 84.73 334 71.02 4e-144 uncharacterized 38.1 kDa protein-like
blastp_kegg lcl|eus:EUTSA_v10016915mg 1 290 + 290 Gaps:2 87.01 331 70.49 4e-144 hypothetical protein
blastp_uniprot_sprot sp|Q39635|Y38K_CAPSE 1 290 + 290 Gaps:3 86.69 338 60.41 4e-122 Uncharacterized 38.1 kDa protein OS Capnoides sempervirens PE 2 SV 1
rpsblast_cdd gnl|CDD|201310 223 280 + 58 Gaps:6 60.38 106 48.44 6e-15 pfam00565 SNase Staphylococcal nuclease homologue. Present in all three domains of cellular life. Four copies in the transcriptional coactivator p100: these however appear to lack the active site residues of Staphylococcal nuclease. Positions 14 (Asp-21) 34 (Arg-35) 39 (Asp-40) 42 (Glu-43) and 110 (Arg-87) (SNase numbering in parentheses) are thought to be involved in substrate-binding and catalysis.
rpsblast_cdd gnl|CDD|197650 221 278 + 58 Gaps:10 49.64 137 42.65 1e-10 smart00318 SNc Staphylococcal nuclease homologues.
rpsblast_cdd gnl|CDD|29137 208 276 + 69 Gaps:15 57.36 129 39.19 5e-07 cd00175 SNc Staphylococcal nuclease homologues. SNase homologues are found in bacteria archaea and eukaryotes. They contain no disufide bonds..

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 220 284 65 SSF50199 none none IPR016071
PANTHER 183 289 107 PTHR12302 none none none
Gene3D 220 281 62 G3DSA:2.40.50.90 none none IPR016071
Gene3D 141 163 23 G3DSA:2.40.50.90 none none IPR016071
SUPERFAMILY 165 217 53 SSF47323 "Reactome:REACT_71" none IPR009080
Pfam 223 281 59 PF00565 none Staphylococcal nuclease homologue IPR016071
ProSiteProfiles 151 292 142 PS50830 none Thermonuclease domain profile. IPR016071

0 Localization

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6

0 Targeting