Protein : Qrob_P0125810.2 Q. robur
Protein Identifier  ? Qrob_P0125810.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=3) PTHR11629 - VACUOLAR PROTON ATPASES Gene Prediction Quality  validated
Protein length 

Sequence

Length: 197  
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

3 GO Terms

Identifier Name Description
GO:0015991 ATP hydrolysis coupled proton transport The transport of protons against an electrochemical gradient, using energy from ATP hydrolysis.
GO:0015078 hydrogen ion transmembrane transporter activity Enables the transfer of hydrogen ions from one side of a membrane to the other.
GO:0033179 proton-transporting V-type ATPase, V0 domain A protein complex that forms part of a proton-transporting V-type ATPase and mediates proton transport across a membrane. The V0 complex consists of at least four different subunits (a,c,d and e); six or more c subunits form a proton-binding rotor ring.

21 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100258865 1 35 + 35 none 4.26 822 91.43 2e-12 vacuolar proton translocating ATPase 100 kDa subunit-like
blastp_kegg lcl|csv:101226714 1 34 + 34 none 14.47 235 88.24 4e-12 vacuolar proton ATPase a3-like
blastp_kegg lcl|pper:PRUPE_ppa001492mg 1 35 + 35 none 4.30 814 88.57 5e-12 hypothetical protein
blastp_kegg lcl|pmum:103335716 1 35 + 35 none 4.30 814 88.57 6e-12 vacuolar proton ATPase a3
blastp_kegg lcl|fve:101293738 1 35 + 35 none 4.31 812 88.57 1e-11 vacuolar proton ATPase a3-like
blastp_kegg lcl|mtr:MTR_4g071070 1 34 + 34 none 4.14 822 91.18 1e-11 V-type proton ATPase 116 kDa subunit a isoform
blastp_kegg lcl|gmx:100810062 1 34 + 34 none 4.16 818 91.18 1e-11 vacuolar proton ATPase a3-like
blastp_kegg lcl|mdm:103412077 1 35 + 35 none 6.11 573 85.71 2e-11 vacuolar proton ATPase a3-like
blastp_kegg lcl|sot:102585214 1 35 + 35 none 4.27 820 85.71 2e-11 vacuolar proton ATPase a3-like
blastp_kegg lcl|sly:101265176 1 35 + 35 none 4.27 820 85.71 2e-11 vacuolar proton ATPase a3-like
blastp_uniprot_sprot sp|Q8W4S4|VHAA3_ARATH 1 34 + 34 none 4.14 821 76.47 3e-10 Vacuolar proton ATPase a3 OS Arabidopsis thaliana GN VHA-a3 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SJT7|VHAA2_ARATH 1 34 + 34 none 4.14 821 73.53 2e-09 Vacuolar proton ATPase a2 OS Arabidopsis thaliana GN VHA-a2 PE 1 SV 1
blastp_uniprot_sprot sp|A1A5G6|VPP1_XENTR 3 35 + 33 none 3.94 837 57.58 2e-06 V-type proton ATPase 116 kDa subunit a isoform 1 OS Xenopus tropicalis GN atp6v0a1 PE 2 SV 1
blastp_uniprot_sprot sp|Q8AVM5|VPP1_XENLA 3 35 + 33 none 3.97 831 57.58 2e-06 V-type proton ATPase 116 kDa subunit a isoform 1 OS Xenopus laevis GN atp6v0a1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9I8D0|VPP1_CHICK 3 35 + 33 none 3.94 838 57.58 3e-06 V-type proton ATPase 116 kDa subunit a isoform 1 OS Gallus gallus GN ATP6V0A1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9Z1G4|VPP1_MOUSE 3 39 + 37 none 4.41 839 54.05 3e-06 V-type proton ATPase 116 kDa subunit a isoform 1 OS Mus musculus GN Atp6v0a1 PE 1 SV 3
blastp_uniprot_sprot sp|Q5R422|VPP1_PONAB 3 35 + 33 none 3.94 837 57.58 3e-06 V-type proton ATPase 116 kDa subunit a isoform 1 OS Pongo abelii GN ATP6V0A1 PE 2 SV 1
blastp_uniprot_sprot sp|Q29466|VPP1_BOVIN 3 35 + 33 none 3.94 838 57.58 3e-06 V-type proton ATPase 116 kDa subunit a isoform 1 OS Bos taurus GN ATP6V0A1 PE 2 SV 1
blastp_uniprot_sprot sp|Q93050|VPP1_HUMAN 3 35 + 33 none 3.94 837 57.58 3e-06 V-type proton ATPase 116 kDa subunit a isoform 1 OS Homo sapiens GN ATP6V0A1 PE 1 SV 3
blastp_uniprot_sprot sp|P25286|VPP1_RAT 3 35 + 33 none 3.94 838 57.58 3e-06 V-type proton ATPase 116 kDa subunit a isoform 1 OS Rattus norvegicus GN Atp6v0a1 PE 2 SV 1
rpsblast_kog gnl|CDD|37400 1 38 + 38 none 4.58 829 50.00 8e-10 KOG2189 KOG2189 KOG2189 Vacuolar H+-ATPase V0 sector subunit a [Energy production and conversion].

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 170 196 27 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 1 91 91 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 1 35 35 PTHR11629 none none IPR002490
Phobius 92 114 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 1 35 35 PTHR11629:SF62 none none none
Phobius 148 169 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 115 147 33 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

2 Localization

Analysis Start End Length
TMHMM 142 164 22
TMHMM 99 121 22

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 111   Mitochondrion 4 0.106 0.576 NON-PLANT 111