Protein : Qrob_P0125800.2 Q. robur
Protein Identifier  ? Qrob_P0125800.2 Organism . Name  Quercus robur
Score  80.3 Score Type  egn
Protein Description  (M=4) 3.4.22.41 - Cathepsin F. Code Enzyme  EC:3.4.22.41
Gene Prediction Quality  validated Protein length 

Sequence

Length: 376  
Kegg Orthology  K01373
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0006508 proteolysis The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO:0008234 cysteine-type peptidase activity Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.

43 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_1449120 1 374 + 374 Gaps:8 99.20 373 80.27 0.0 cysteine protease putative (EC:3.4.22.16)
blastp_kegg lcl|csv:101204401 5 374 + 370 Gaps:6 98.67 377 79.57 0.0 cysteine proteinase RD19a-like
blastp_kegg lcl|cmo:103499710 5 374 + 370 Gaps:6 98.67 377 79.84 0.0 cysteine proteinase RD19a-like
blastp_kegg lcl|fve:101294030 28 371 + 344 Gaps:8 93.01 372 83.24 0.0 cysteine proteinase RD19a-like
blastp_kegg lcl|mdm:103445116 1 374 + 374 Gaps:8 99.73 371 79.19 0.0 cysteine proteinase RD19a
blastp_kegg lcl|tcc:TCM_006819 1 374 + 374 Gaps:14 94.18 395 80.11 0.0 Papain family cysteine protease
blastp_kegg lcl|pxb:103962063 1 374 + 374 Gaps:8 99.73 371 78.65 0.0 cysteine proteinase RD19a
blastp_kegg lcl|pop:POPTR_0004s16740g 15 374 + 360 Gaps:9 95.92 368 80.74 0.0 POPTRDRAFT_648662 cysteine proteinase A494 precursor
blastp_kegg lcl|pmum:103335715 25 370 + 346 Gaps:7 92.37 367 82.89 0.0 cysteine proteinase RD19a
blastp_kegg lcl|pop:POPTR_0009s12420g 25 375 + 351 Gaps:9 93.48 368 82.27 0.0 POPTRDRAFT_833041 cysteine proteinase A494 precursor
blastp_pdb 2c0y_A 45 365 + 321 Gaps:37 98.41 315 41.29 4e-62 mol:protein length:315 PROCATHEPSIN S
blastp_pdb 1cs8_A 54 365 + 312 Gaps:24 96.20 316 39.80 1e-58 mol:protein length:316 HUMAN PROCATHEPSIN L
blastp_pdb 3qj3_B 60 366 + 307 Gaps:43 91.84 331 41.78 4e-58 mol:protein length:331 Cathepsin L-like protein
blastp_pdb 3qj3_A 60 366 + 307 Gaps:43 91.84 331 41.78 4e-58 mol:protein length:331 Cathepsin L-like protein
blastp_pdb 1cjl_A 54 365 + 312 Gaps:24 97.44 312 40.13 5e-58 mol:protein length:312 PROCATHEPSIN L
blastp_pdb 2o6x_A 60 365 + 306 Gaps:37 95.16 310 42.71 1e-54 mol:protein length:310 Secreted cathepsin L 1
blastp_pdb 3hwn_D 102 365 + 264 Gaps:19 98.06 258 41.90 6e-54 mol:protein length:258 Cathepsin L1
blastp_pdb 3hwn_C 102 365 + 264 Gaps:19 98.06 258 41.90 6e-54 mol:protein length:258 Cathepsin L1
blastp_pdb 3hwn_B 102 365 + 264 Gaps:19 98.06 258 41.90 6e-54 mol:protein length:258 Cathepsin L1
blastp_pdb 3hwn_A 102 365 + 264 Gaps:19 98.06 258 41.90 6e-54 mol:protein length:258 Cathepsin L1
blastp_uniprot_sprot sp|P43296|RD19A_ARATH 5 374 + 370 Gaps:11 97.55 368 75.21 0.0 Cysteine proteinase RD19a OS Arabidopsis thaliana GN RD19A PE 2 SV 1
blastp_uniprot_sprot sp|P43295|A494_ARATH 1 372 + 372 Gaps:11 100.00 361 73.68 0.0 Probable cysteine proteinase A494 OS Arabidopsis thaliana GN At2g21430 PE 2 SV 2
blastp_uniprot_sprot sp|P25804|CYSP_PEA 1 373 + 373 Gaps:13 99.72 363 71.55 0.0 Cysteine proteinase 15A OS Pisum sativum PE 1 SV 1
blastp_uniprot_sprot sp|Q10716|CYSP1_MAIZE 25 373 + 349 Gaps:13 93.80 371 70.11 2e-178 Cysteine proteinase 1 OS Zea mays GN CCP1 PE 2 SV 1
blastp_uniprot_sprot sp|P04988|CYSP1_DICDI 51 366 + 316 Gaps:14 92.71 343 44.34 7e-85 Cysteine proteinase 1 OS Dictyostelium discoideum GN cprA PE 1 SV 2
blastp_uniprot_sprot sp|Q26534|CATL_SCHMA 53 366 + 314 Gaps:28 94.04 319 45.33 3e-77 Cathepsin L OS Schistosoma mansoni GN CL1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9VN93|CPR1_DROME 54 366 + 313 Gaps:23 49.84 614 45.10 2e-76 Putative cysteine proteinase CG12163 OS Drosophila melanogaster GN CG12163 PE 2 SV 2
blastp_uniprot_sprot sp|P14658|CYSP_TRYBB 54 366 + 313 Gaps:32 66.44 450 46.49 3e-75 Cysteine proteinase OS Trypanosoma brucei brucei PE 1 SV 1
blastp_uniprot_sprot sp|Q80LP4|CATV_NPVAH 53 371 + 319 Gaps:29 91.99 337 38.71 2e-72 Viral cathepsin OS Adoxophyes honmai nucleopolyhedrovirus GN VCATH PE 3 SV 1
blastp_uniprot_sprot sp|P25779|CYSP_TRYCR 56 366 + 311 Gaps:32 63.60 467 45.79 5e-71 Cruzipain OS Trypanosoma cruzi PE 1 SV 1

19 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 17 21 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
SMART 143 368 226 SM00645 none Papain family cysteine protease IPR000668
PANTHER 57 368 312 PTHR12411:SF296 none none none
Phobius 1 4 4 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Phobius 1 21 21 SIGNAL_PEPTIDE none Signal peptide region none
ProSitePatterns 308 318 11 PS00639 none Eukaryotic thiol (cysteine) proteases histidine active site. IPR025660
PANTHER 57 368 312 PTHR12411 none none IPR013128
Phobius 22 375 354 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Gene3D 51 367 317 G3DSA:3.90.70.10 none none none
Phobius 5 16 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
SMART 57 113 57 SM00848 none Cathepsin propeptide inhibitor domain (I29) IPR013201
PRINTS 332 338 7 PR00705 none Papain cysteine protease (C1) family signature IPR000668
PRINTS 310 320 11 PR00705 none Papain cysteine protease (C1) family signature IPR000668
PRINTS 161 176 16 PR00705 none Papain cysteine protease (C1) family signature IPR000668
Pfam 143 366 224 PF00112 none Papain family cysteine protease IPR000668
Pfam 57 113 57 PF08246 none Cathepsin propeptide inhibitor domain (I29) IPR013201
ProSitePatterns 161 172 12 PS00139 none Eukaryotic thiol (cysteine) proteases cysteine active site. IPR000169
ProSitePatterns 332 351 20 PS00640 none Eukaryotic thiol (cysteine) proteases asparagine active site. IPR025661
SUPERFAMILY 55 367 313 SSF54001 none none none

1 Localization

Analysis Start End Length
SignalP_EUK 1 21 20

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 21   Secretory pathway 2 0.852 0.025 NON-PLANT 21