Protein : Qrob_P0121830.2 Q. robur
Protein Identifier  ? Qrob_P0121830.2 Organism . Name  Quercus robur
Score  68.6 Score Type  egn
Protein Description  (M=3) PTHR10381:SF11 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT, MITOCHONDRIAL-RELATED (PTHR10381:SF11) Code Enzyme  EC:3.4.21.92
Gene Prediction Quality  validated Protein length 

Sequence

Length: 242  
Kegg Orthology  K01358
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0006508 proteolysis The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO:0004252 serine-type endopeptidase activity Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100266180 27 240 + 214 Gaps:1 88.38 241 93.90 1e-147 ATP-dependent Clp protease proteolytic subunit 2 mitochondrial-like
blastp_kegg lcl|pmum:103321077 1 238 + 238 Gaps:4 97.52 242 87.71 4e-146 ATP-dependent Clp protease proteolytic subunit 2 mitochondrial
blastp_kegg lcl|fve:101291620 1 238 + 238 Gaps:10 97.52 242 86.86 8e-146 ATP-dependent Clp protease proteolytic subunit 2 mitochondrial-like
blastp_kegg lcl|rcu:RCOM_1375740 1 240 + 240 Gaps:4 81.76 296 83.88 1e-145 ATP-dependent Clp protease proteolytic subunit putative (EC:3.4.21.92)
blastp_kegg lcl|pper:PRUPE_ppa010637mg 1 238 + 238 Gaps:4 97.52 242 86.86 2e-145 hypothetical protein
blastp_kegg lcl|gmx:100782585 1 240 + 240 Gaps:3 99.58 238 84.39 2e-145 ATP-dependent Clp protease proteolytic subunit 2 mitochondrial-like
blastp_kegg lcl|tcc:TCM_007735 1 241 + 241 Gaps:12 100.00 247 82.19 2e-143 Nuclear-encoded CLP protease P7
blastp_kegg lcl|gmx:100791303 27 240 + 214 Gaps:1 90.25 236 91.08 5e-143 ATP-dependent Clp protease proteolytic subunit 2 mitochondrial-like
blastp_kegg lcl|pxb:103943214 1 238 + 238 Gaps:8 97.89 237 84.48 7e-142 ATP-dependent Clp protease proteolytic subunit 2 mitochondrial
blastp_kegg lcl|cmo:103500353 2 238 + 237 Gaps:4 98.35 243 82.43 1e-141 ATP-dependent Clp protease proteolytic subunit 2 mitochondrial
blastp_pdb 1tg6_G 27 222 + 196 none 70.76 277 62.76 1e-86 mol:protein length:277 Putative ATP-dependent Clp protease proteolyt
blastp_pdb 1tg6_F 27 222 + 196 none 70.76 277 62.76 1e-86 mol:protein length:277 Putative ATP-dependent Clp protease proteolyt
blastp_pdb 1tg6_E 27 222 + 196 none 70.76 277 62.76 1e-86 mol:protein length:277 Putative ATP-dependent Clp protease proteolyt
blastp_pdb 1tg6_D 27 222 + 196 none 70.76 277 62.76 1e-86 mol:protein length:277 Putative ATP-dependent Clp protease proteolyt
blastp_pdb 1tg6_C 27 222 + 196 none 70.76 277 62.76 1e-86 mol:protein length:277 Putative ATP-dependent Clp protease proteolyt
blastp_pdb 1tg6_B 27 222 + 196 none 70.76 277 62.76 1e-86 mol:protein length:277 Putative ATP-dependent Clp protease proteolyt
blastp_pdb 1tg6_A 27 222 + 196 none 70.76 277 62.76 1e-86 mol:protein length:277 Putative ATP-dependent Clp protease proteolyt
blastp_pdb 3p2l_G 30 221 + 192 none 95.52 201 59.38 1e-82 mol:protein length:201 ATP-dependent Clp protease proteolytic subuni
blastp_pdb 3p2l_F 30 221 + 192 none 95.52 201 59.38 1e-82 mol:protein length:201 ATP-dependent Clp protease proteolytic subuni
blastp_pdb 3p2l_E 30 221 + 192 none 95.52 201 59.38 1e-82 mol:protein length:201 ATP-dependent Clp protease proteolytic subuni
blastp_uniprot_sprot sp|Q9FN42|CLPP2_ARATH 1 240 + 240 Gaps:1 99.17 241 80.33 2e-141 ATP-dependent Clp protease proteolytic subunit 2 mitochondrial OS Arabidopsis thaliana GN CLPP2 PE 1 SV 1
blastp_uniprot_sprot sp|Q6G178|CLPP_BARQU 24 221 + 198 none 94.29 210 64.14 1e-94 ATP-dependent Clp protease proteolytic subunit OS Bartonella quintana (strain Toulouse) GN clpP PE 3 SV 1
blastp_uniprot_sprot sp|A9ISA4|CLPP_BART1 24 221 + 198 none 94.29 210 64.65 3e-94 ATP-dependent Clp protease proteolytic subunit OS Bartonella tribocorum (strain CIP 105476 / IBS 506) GN clpP PE 3 SV 1
blastp_uniprot_sprot sp|Q6G3Z3|CLPP_BARHE 24 221 + 198 none 94.29 210 63.13 2e-93 ATP-dependent Clp protease proteolytic subunit OS Bartonella henselae (strain ATCC 49882 / Houston 1) GN clpP PE 3 SV 1
blastp_uniprot_sprot sp|A1USA7|CLPP_BARBK 28 221 + 194 none 92.38 210 64.95 3e-93 ATP-dependent Clp protease proteolytic subunit OS Bartonella bacilliformis (strain ATCC 35685 / KC583) GN clpP PE 3 SV 1
blastp_uniprot_sprot sp|B0CGR1|CLPP_BRUSI 22 221 + 200 none 95.69 209 60.50 1e-90 ATP-dependent Clp protease proteolytic subunit OS Brucella suis (strain ATCC 23445 / NCTC 10510) GN clpP PE 3 SV 1
blastp_uniprot_sprot sp|A9M5C2|CLPP_BRUC2 22 221 + 200 none 95.69 209 60.50 1e-90 ATP-dependent Clp protease proteolytic subunit OS Brucella canis (strain ATCC 23365 / NCTC 10854) GN clpP PE 3 SV 1
blastp_uniprot_sprot sp|Q9L7X6|CLPP_BRUAB 22 221 + 200 none 95.69 209 60.50 1e-90 ATP-dependent Clp protease proteolytic subunit OS Brucella abortus biovar 1 (strain 9-941) GN clpP PE 3 SV 1
blastp_uniprot_sprot sp|Q2YPX1|CLPP_BRUA2 22 221 + 200 none 95.69 209 60.50 1e-90 ATP-dependent Clp protease proteolytic subunit OS Brucella abortus (strain 2308) GN clpP PE 3 SV 1
blastp_uniprot_sprot sp|B2S5W1|CLPP_BRUA1 22 221 + 200 none 95.69 209 60.50 1e-90 ATP-dependent Clp protease proteolytic subunit OS Brucella abortus (strain S19) GN clpP PE 3 SV 1

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 40 224 185 G3DSA:3.90.226.10 none none IPR029045
Pfam 40 220 181 PF00574 none Clp protease IPR023562
SUPERFAMILY 39 222 184 SSF52096 none none IPR029045
PANTHER 1 222 222 PTHR10381:SF11 none none none
ProSitePatterns 140 153 14 PS00382 none Endopeptidase Clp histidine active site. IPR018215
ProSitePatterns 118 129 12 PS00381 none Endopeptidase Clp serine active site. IPR018215
PRINTS 118 135 18 PR00127 none Clp protease catalytic subunit P signature IPR001907
PRINTS 139 158 20 PR00127 none Clp protease catalytic subunit P signature IPR001907
PRINTS 87 107 21 PR00127 none Clp protease catalytic subunit P signature IPR001907
PRINTS 196 215 20 PR00127 none Clp protease catalytic subunit P signature IPR001907
PRINTS 47 62 16 PR00127 none Clp protease catalytic subunit P signature IPR001907
PANTHER 1 222 222 PTHR10381 none none IPR023562

0 Localization

16 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nP_A4 Qrob_Chr02 2 s_1A0FUE_1868 s_1A1UAI_500 20,64 20,47 21,36 lod 5.8 10.9
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nEpis_A4 Qrob_Chr02 2 s_1BAGIZ_823 s_1BN4CB_644 23,06 23,06 23,06 lod 4.9 11
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7
Champenoux_2015_nSecLBD_A4 Qrob_Chr02 2 s_1AN4ZM_1665 v_8587_238 18,52 18,89 18,27 lod 3.2 7.4

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 11   Mitochondrion 1 0.034 0.948 NON-PLANT 11