Protein : Qrob_P0120860.2 Q. robur
Protein Identifier  ? Qrob_P0120860.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=40) 2.4.1.12 - Cellulose synthase (UDP-forming). Code Enzyme  EC:2.4.1.12
Gene Prediction Quality  validated Protein length 

Sequence

Length: 748  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0030244 cellulose biosynthetic process The chemical reactions and pathways resulting in the formation of cellulose, a linear beta1-4 glucan of molecular mass 50-400 kDa with the pyranose units in the -4C1 conformation.
GO:0016760 cellulose synthase (UDP-forming) activity Catalysis of the reaction: UDP-glucose + ((1,4)-beta-D-glucosyl)(n) = UDP + ((1,4)-beta-D-glucosyl)(n+1).

30 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_016501 1 740 + 740 Gaps:8 99.19 742 66.44 0.0 Cellulose synthase like G3 putative
blastp_kegg lcl|mdm:103404658 17 747 + 731 Gaps:7 98.78 735 66.53 0.0 cellulose synthase-like protein G3
blastp_kegg lcl|pop:POPTR_0003s14220g 1 746 + 746 Gaps:7 100.00 739 66.71 0.0 POPTRDRAFT_554513 hypothetical protein
blastp_kegg lcl|pxb:103933896 9 747 + 739 Gaps:6 99.86 736 65.17 0.0 cellulose synthase-like protein G3
blastp_kegg lcl|fve:101314092 10 740 + 731 Gaps:9 99.18 732 67.22 0.0 cellulose synthase-like protein G3-like
blastp_kegg lcl|pop:POPTR_0003s14230g 10 740 + 731 Gaps:5 97.58 744 66.39 0.0 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa001978mg 9 742 + 734 Gaps:7 99.32 734 65.43 0.0 hypothetical protein
blastp_kegg lcl|vvi:100253121 4 746 + 743 Gaps:7 99.87 741 64.46 0.0 cellulose synthase-like protein G3
blastp_kegg lcl|pmum:103337766 8 747 + 740 Gaps:8 99.86 735 65.26 0.0 cellulose synthase-like protein G3
blastp_kegg lcl|tcc:TCM_016503 10 740 + 731 Gaps:9 98.12 744 65.21 0.0 Cellulose synthase like G3 putative
blastp_uniprot_sprot sp|Q0WVN5|CSLG3_ARATH 18 739 + 722 Gaps:17 94.94 751 57.50 0.0 Cellulose synthase-like protein G3 OS Arabidopsis thaliana GN CSLG3 PE 2 SV 2
blastp_uniprot_sprot sp|Q570S7|CSLG1_ARATH 19 739 + 721 Gaps:21 93.16 760 57.20 0.0 Cellulose synthase-like protein G1 OS Arabidopsis thaliana GN CSLG1 PE 2 SV 1
blastp_uniprot_sprot sp|Q8VYR4|CSLG2_ARATH 19 737 + 719 Gaps:20 97.37 722 56.47 0.0 Cellulose synthase-like protein G2 OS Arabidopsis thaliana GN CSLG2 PE 2 SV 1
blastp_uniprot_sprot sp|Q0DXZ1|CSLE2_ORYSJ 17 740 + 724 Gaps:30 97.18 745 38.12 3e-174 Cellulose synthase-like protein E2 OS Oryza sativa subsp. japonica GN CSLE2 PE 2 SV 1
blastp_uniprot_sprot sp|Q651X6|CSLE6_ORYSJ 10 740 + 731 Gaps:30 99.31 728 38.17 6e-172 Cellulose synthase-like protein E6 OS Oryza sativa subsp. japonica GN CSLE6 PE 2 SV 1
blastp_uniprot_sprot sp|Q651X7|CSLE1_ORYSJ 17 739 + 723 Gaps:39 97.69 737 38.75 7e-168 Cellulose synthase-like protein E1 OS Oryza sativa subsp. japonica GN CSLE1 PE 2 SV 2
blastp_uniprot_sprot sp|Q8VZK9|CSLE1_ARATH 17 743 + 727 Gaps:26 97.53 729 39.24 7e-166 Cellulose synthase-like protein E1 OS Arabidopsis thaliana GN CSLE1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SWW6|CESA7_ARATH 42 746 + 705 Gaps:116 74.76 1026 33.51 4e-123 Cellulose synthase A catalytic subunit 7 [UDP-forming] OS Arabidopsis thaliana GN CESA7 PE 1 SV 1
blastp_uniprot_sprot sp|Q339N5|CSLH1_ORYSJ 72 741 + 670 Gaps:54 92.00 750 34.78 9e-115 Cellulose synthase-like protein H1 OS Oryza sativa subsp. japonica GN CSLH1 PE 2 SV 2
blastp_uniprot_sprot sp|Q69P51|CESA9_ORYSJ 66 746 + 681 Gaps:101 70.71 1055 31.77 2e-111 Cellulose synthase A catalytic subunit 9 [UDP-forming] OS Oryza sativa subsp. japonica GN CESA9 PE 2 SV 1
rpsblast_cdd gnl|CDD|178481 8 746 + 739 Gaps:11 100.00 734 69.48 0.0 PLN02893 PLN02893 Cellulose synthase-like protein.
rpsblast_cdd gnl|CDD|177841 66 746 + 681 Gaps:107 71.54 1040 32.80 1e-108 PLN02189 PLN02189 cellulose synthase.
rpsblast_cdd gnl|CDD|177842 42 677 + 636 Gaps:92 86.77 756 34.60 1e-95 PLN02190 PLN02190 cellulose synthase-like protein.
rpsblast_cdd gnl|CDD|177890 70 679 + 610 Gaps:164 64.85 1135 30.30 3e-89 PLN02248 PLN02248 cellulose synthase-like protein.
rpsblast_cdd gnl|CDD|177846 42 734 + 693 Gaps:45 70.01 977 37.57 2e-76 PLN02195 PLN02195 cellulose synthase A.
rpsblast_cdd gnl|CDD|146277 111 747 + 637 Gaps:32 84.22 716 38.64 3e-73 pfam03552 Cellulose_synt Cellulose synthase. Cellulose an aggregate of unbranched polymers of beta-1 4-linked glucose residues is the major component of wood and thus paper and is synthesised by plants most algae some bacteria and fungi and even some animals. The genes that synthesise cellulose in higher plants differ greatly from the well-characterized genes found in Acetobacter and Agrobacterium sp. More correctly designated as 'cellulose synthase catalytic subunits' plant cellulose synthase (CesA) proteins are integral membrane proteins approximately 1 000 amino acids in length. There are a number of highly conserved residues including several motifs shown to be necessary for processive glycosyltransferase activity.
rpsblast_cdd gnl|CDD|178244 42 746 + 705 Gaps:40 63.86 1079 37.30 4e-73 PLN02638 PLN02638 cellulose synthase A (UDP-forming) catalytic subunit.
rpsblast_cdd gnl|CDD|178503 61 734 + 674 Gaps:49 63.41 1044 37.16 5e-73 PLN02915 PLN02915 cellulose synthase A [UDP-forming] catalytic subunit.
rpsblast_cdd gnl|CDD|178055 41 746 + 706 Gaps:45 62.98 1094 35.99 7e-71 PLN02436 PLN02436 cellulose synthase A.
rpsblast_cdd gnl|CDD|178022 61 744 + 684 Gaps:37 61.01 1085 36.56 2e-70 PLN02400 PLN02400 cellulose synthase.

24 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 450 576 127 SSF53448 none none IPR029044
SUPERFAMILY 285 401 117 SSF53448 none none IPR029044
SUPERFAMILY 121 172 52 SSF53448 none none IPR029044
Phobius 552 570 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 722 741 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 111 400 290 PF03552 none Cellulose synthase IPR005150
Pfam 418 741 324 PF03552 none Cellulose synthase IPR005150
Phobius 571 594 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 29 47 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 692 710 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 81 531 451 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 661 680 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 595 605 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 624 660 37 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 711 721 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 59 80 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 532 551 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 42 741 700 PTHR13301:SF27 none none none
Phobius 742 747 6 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 681 691 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 606 623 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 28 28 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 42 741 700 PTHR13301 none none none
Phobius 48 58 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

9 Localization

Analysis Start End Length
TMHMM 509 531 22
TMHMM 541 563 22
TMHMM 692 714 22
TMHMM 726 745 19
TMHMM 570 591 21
TMHMM 606 628 22
TMHMM 29 51 22
TMHMM 61 80 19
TMHMM 655 677 22

17 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2002_QTL7_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 29 52 lod 8,1 16
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nP_A4 Qrob_Chr02 2 s_1A0FUE_1868 s_1A1UAI_500 20,64 20,47 21,36 lod 5.8 10.9
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL6_d13Cf Qrob_Chr02 2 s_1AEP21_172 v_6048_204 46.33 22,5 65,23 lod 4.972 0.03
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 28   Mitochondrion 5 0.110 0.475 NON-PLANT 28