Protein : Qrob_P0120090.2 Q. robur
Protein Identifier  ? Qrob_P0120090.2 Organism . Name  Quercus robur
Score  51.2 Score Type  egn
Protein Description  (M=4) K09493 - T-complex protein 1 subunit alpha Gene Prediction Quality  validated
Protein length 

Sequence

Length: 379  
Kegg Orthology  K09493
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0006457 protein folding The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
GO:0051082 unfolded protein binding Interacting selectively and non-covalently with an unfolded protein.

49 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0014s05750g 3 219 + 217 Gaps:3 39.93 546 85.32 4e-123 t-complex polypeptide 1 family protein
blastp_kegg lcl|cic:CICLE_v10019588mg 3 219 + 217 Gaps:3 40.00 545 84.40 4e-122 hypothetical protein
blastp_kegg lcl|cit:102625356 3 219 + 217 Gaps:3 40.00 545 84.40 4e-122 T-complex protein 1 subunit alpha-like
blastp_kegg lcl|rcu:RCOM_1276510 3 219 + 217 Gaps:3 39.93 546 84.40 8e-122 chaperonin containing t-complex protein 1 alpha subunit tcpa putative
blastp_kegg lcl|pxb:103966894 3 197 + 195 none 35.45 550 91.79 4e-121 T-complex protein 1 subunit alpha-like
blastp_kegg lcl|pvu:PHAVU_002G245800g 3 197 + 195 none 35.78 545 91.79 4e-121 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa003729mg 3 197 + 195 none 35.26 553 91.28 7e-121 hypothetical protein
blastp_kegg lcl|pmum:103337015 3 197 + 195 none 35.26 553 91.28 8e-121 T-complex protein 1 subunit alpha
blastp_kegg lcl|pxb:103960314 3 192 + 190 none 34.55 550 93.68 9e-121 T-complex protein 1 subunit alpha
blastp_kegg lcl|mdm:103436969 3 192 + 190 none 34.55 550 93.68 9e-121 T-complex protein 1 subunit alpha
blastp_pdb 3iyg_A 6 197 + 192 none 36.29 529 68.75 1e-89 mol:protein length:529 T-complex protein 1 subunit alpha
blastp_pdb 3p9e_i 3 197 + 195 none 34.88 559 65.64 1e-85 mol:protein length:559 T-complex protein 1 subunit alpha
blastp_pdb 3p9e_a 3 197 + 195 none 34.88 559 65.64 1e-85 mol:protein length:559 T-complex protein 1 subunit alpha
blastp_pdb 3p9d_I 3 197 + 195 none 34.88 559 65.64 1e-85 mol:protein length:559 T-complex protein 1 subunit alpha
blastp_pdb 3p9d_A 3 197 + 195 none 34.88 559 65.64 1e-85 mol:protein length:559 T-complex protein 1 subunit alpha
blastp_pdb 1a6e_B 10 178 + 169 Gaps:1 30.94 543 50.60 4e-45 mol:protein length:543 THERMOSOME (BETA SUBUNIT)
blastp_pdb 1a6d_B 10 178 + 169 Gaps:1 30.94 543 50.60 4e-45 mol:protein length:543 THERMOSOME (BETA SUBUNIT)
blastp_pdb 1q3r_D 10 178 + 169 Gaps:1 30.66 548 45.24 2e-42 mol:protein length:548 Thermosome alpha subunit
blastp_pdb 1q3r_C 10 178 + 169 Gaps:1 30.66 548 45.24 2e-42 mol:protein length:548 Thermosome alpha subunit
blastp_pdb 1q3r_B 10 178 + 169 Gaps:1 30.66 548 45.24 2e-42 mol:protein length:548 Thermosome alpha subunit
blastp_uniprot_sprot sp|P28769|TCPA_ARATH 5 219 + 215 Gaps:3 39.63 545 82.41 9e-117 T-complex protein 1 subunit alpha OS Arabidopsis thaliana GN CCT1 PE 2 SV 1
blastp_uniprot_sprot sp|P11983|TCPA_MOUSE 2 197 + 196 none 35.25 556 68.37 6e-90 T-complex protein 1 subunit alpha OS Mus musculus GN Tcp1 PE 1 SV 3
blastp_uniprot_sprot sp|P28480|TCPA_RAT 2 287 + 286 Gaps:29 54.14 556 52.16 9e-90 T-complex protein 1 subunit alpha OS Rattus norvegicus GN Tcp1 PE 1 SV 1
blastp_uniprot_sprot sp|P17987|TCPA_HUMAN 2 197 + 196 none 35.25 556 68.37 1e-89 T-complex protein 1 subunit alpha OS Homo sapiens GN TCP1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9XT06|TCPA_MONDO 2 197 + 196 none 35.19 557 68.37 1e-89 T-complex protein 1 subunit alpha OS Monodelphis domestica GN TCP1 PE 2 SV 1
blastp_uniprot_sprot sp|Q32L40|TCPA_BOVIN 2 197 + 196 none 35.25 556 68.37 2e-89 T-complex protein 1 subunit alpha OS Bos taurus GN TCP1 PE 1 SV 1
blastp_uniprot_sprot sp|P18279|TCPA_CRIGR 2 197 + 196 none 35.25 556 68.37 2e-89 T-complex protein 1 subunit alpha OS Cricetulus griseus GN TCP1 PE 2 SV 1
blastp_uniprot_sprot sp|P12613|TCPA_DROME 4 197 + 194 none 34.83 557 70.10 6e-89 T-complex protein 1 subunit alpha OS Drosophila melanogaster GN T-cp1 PE 2 SV 2
blastp_uniprot_sprot sp|Q4R5G2|TCPA_MACFA 2 197 + 196 none 35.25 556 67.86 6e-89 T-complex protein 1 subunit alpha OS Macaca fascicularis GN TCP1 PE 2 SV 1
blastp_uniprot_sprot sp|O15891|TCPA_TETPY 3 192 + 190 none 34.73 547 70.00 6e-89 T-complex protein 1 subunit alpha OS Tetrahymena pyriformis PE 3 SV 1

22 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 1 188 188 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 285 289 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SUPERFAMILY 140 190 51 SSF54849 none none none
Gene3D 9 181 173 G3DSA:1.10.560.10 none none IPR027413
Phobius 239 258 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 215 238 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 346 378 33 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SUPERFAMILY 9 136 128 SSF48592 none none none
PRINTS 81 100 20 PR00304 none Tailless complex polypeptide 1 (chaperone) signature IPR017998
PRINTS 29 45 17 PR00304 none Tailless complex polypeptide 1 (chaperone) signature IPR017998
PRINTS 51 69 19 PR00304 none Tailless complex polypeptide 1 (chaperone) signature IPR017998
Phobius 210 214 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 189 209 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 308 327 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Pfam 27 185 159 PF00118 none TCP-1/cpn60 chaperonin family IPR002423
Phobius 259 284 26 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 290 307 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
ProSitePatterns 81 89 9 PS00995 "Reactome:REACT_17015" Chaperonins TCP-1 signature 3. IPR002194
ProSitePatterns 53 69 17 PS00751 "Reactome:REACT_17015" Chaperonins TCP-1 signature 2. IPR002194
ProSitePatterns 32 44 13 PS00750 "Reactome:REACT_17015" Chaperonins TCP-1 signature 1. IPR002194
Phobius 328 345 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 8 193 186 PTHR11353 none none IPR002423

0 Localization

13 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Bourran2_2014_nEpiBC_A4 Qrob_Chr07 7 s_2FI9D9_500 s_1AXDMJ_325 12,26 0 34,9 lod 2,2306 6,1
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9
Bourran2_2002_QTL10_peak_Bud_burst_3P Qrob_Chr07 7 s_1CAWP_311 s_1BEZ9M_461 7,5 0 21,5 lod 3,7 6,3
Bourran2_2014_nPriBD*_A4 Qrob_Chr07 7 s_1A7UI0_596 s_1A3H6S_352 8,02 0 20,53 lod 4,1062 10,8
Bourran2_2014_nPriLBD*_A4 Qrob_Chr07 7 s_1C6BY7_802 s_1BPEBU_1211 7,15 0 16,34 lod 3,9419 10,2

0 Targeting