Protein : Qrob_P0119950.2 Q. robur
Protein Identifier  ? Qrob_P0119950.2 Organism . Name  Quercus robur
Score  99.1 Score Type  egn
Protein Description  (M=3) PTHR22838 - WD REPEAT PROTEIN 26-RELATED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 304  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

18 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v10014731mg 1 301 + 301 none 56.58 532 73.09 4e-157 hypothetical protein
blastp_kegg lcl|cit:102613121 1 301 + 301 none 51.81 581 72.76 7e-155 WD repeat-containing protein 26-like
blastp_kegg lcl|rcu:RCOM_1454530 1 301 + 301 Gaps:3 51.56 578 74.16 4e-153 WD-repeat protein putative
blastp_kegg lcl|tcc:TCM_007644 1 302 + 302 none 51.98 581 73.18 1e-152 Transducin family protein / WD-40 repeat family protein isoform 1
blastp_kegg lcl|pper:PRUPE_ppa003324mg 1 301 + 301 none 51.45 585 70.10 1e-144 hypothetical protein
blastp_kegg lcl|eus:EUTSA_v10013060mg 1 302 + 302 Gaps:1 51.62 587 67.99 5e-141 hypothetical protein
blastp_kegg lcl|brp:103855800 1 302 + 302 Gaps:3 51.78 589 65.25 5e-139 WD repeat-containing protein 26-like
blastp_kegg lcl|vvi:100266218 1 301 + 301 Gaps:4 52.05 586 68.85 4e-138 WD repeat-containing protein 26-like
blastp_kegg lcl|aly:ARALYDRAFT_487697 1 301 + 301 Gaps:1 51.45 587 66.23 2e-137 transducin family protein
blastp_kegg lcl|crb:CARUB_v10000543mg 1 303 + 303 Gaps:7 51.79 587 65.79 5e-137 hypothetical protein
blastp_uniprot_sprot sp|Q8C6G8|WDR26_MOUSE 65 301 + 237 Gaps:22 40.41 641 36.68 9e-43 WD repeat-containing protein 26 OS Mus musculus GN Wdr26 PE 2 SV 3
blastp_uniprot_sprot sp|Q9H7D7|WDR26_HUMAN 65 301 + 237 Gaps:22 39.18 661 36.68 1e-42 WD repeat-containing protein 26 OS Homo sapiens GN WDR26 PE 1 SV 3
blastp_uniprot_sprot sp|Q5SP67|WDR26_DANRE 65 301 + 237 Gaps:6 42.19 576 36.21 1e-42 WD repeat-containing protein 26 OS Danio rerio GN wdr26 PE 1 SV 1
blastp_uniprot_sprot sp|Q28D01|WDR26_XENTR 65 301 + 237 Gaps:31 43.65 614 34.33 3e-42 WD repeat-containing protein 26 OS Xenopus tropicalis GN wdr26 PE 2 SV 2
blastp_uniprot_sprot sp|Q7K0L4|WDR26_DROME 43 301 + 259 Gaps:11 42.86 630 32.22 6e-36 WD repeat-containing protein 26 homolog OS Drosophila melanogaster GN CG7611 PE 1 SV 1
blastp_uniprot_sprot sp|Q9UT85|YIPC_SCHPO 65 302 + 238 Gaps:4 46.15 507 32.91 4e-31 Uncharacterized WD repeat-containing protein C343.04c OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN SPAC343.04c PE 4 SV 1
blastp_uniprot_sprot sp|P25569|GID7_YEAST 171 295 + 125 Gaps:21 16.91 745 30.16 8e-09 Glucose-induced degradation protein 7 OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN GID7 PE 1 SV 2
rpsblast_kog gnl|CDD|35514 47 301 + 255 Gaps:2 48.75 519 48.22 7e-80 KOG0293 KOG0293 KOG0293 WD40 repeat-containing protein [Function unknown].

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 37 301 265 PTHR22838 none none none
Pfam 264 300 37 PF00400 none WD domain, G-beta repeat IPR001680
ProSiteProfiles 268 303 36 PS50294 none Trp-Asp (WD) repeats circular profile. IPR017986
SMART 261 300 40 SM00320 none WD40 repeats IPR001680
SUPERFAMILY 261 300 40 SSF50978 none none IPR017986
ProSiteProfiles 268 303 36 PS50082 none Trp-Asp (WD) repeats profile. IPR001680
ProSitePatterns 287 301 15 PS00678 none Trp-Asp (WD) repeats signature. IPR019775
Gene3D 261 301 41 G3DSA:2.130.10.10 none none IPR015943
ProSiteProfiles 62 94 33 PS50896 none LIS1 homology (LisH) motif profile. IPR006594
SMART 95 152 58 SM00668 none C-terminal to LisH motif. IPR006595
PANTHER 37 301 265 PTHR22838:SF0 none none none
ProSiteProfiles 95 152 58 PS50897 none C-terminal to LisH (CTLH) motif profile. IPR006595

0 Localization

13 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Bourran2_2014_nEpiBC_A4 Qrob_Chr07 7 s_2FI9D9_500 s_1AXDMJ_325 12,26 0 34,9 lod 2,2306 6,1
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9
Bourran2_2002_QTL10_peak_Bud_burst_3P Qrob_Chr07 7 s_1CAWP_311 s_1BEZ9M_461 7,5 0 21,5 lod 3,7 6,3
Bourran2_2014_nPriBD*_A4 Qrob_Chr07 7 s_1A7UI0_596 s_1A3H6S_352 8,02 0 20,53 lod 4,1062 10,8
Bourran2_2014_nPriLBD*_A4 Qrob_Chr07 7 s_1C6BY7_802 s_1BPEBU_1211 7,15 0 16,34 lod 3,9419 10,2

0 Targeting