Protein : Qrob_P0119820.2 Q. robur
Protein Identifier  ? Qrob_P0119820.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) K07910 - Ras-related protein Rab-18 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 166  
Kegg Orthology  K07910
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0 Synonyms

6 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0007165 signal transduction The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.
GO:0005622 intracellular The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO:0005525 GTP binding Interacting selectively and non-covalently with GTP, guanosine triphosphate.
GO:0015031 protein transport The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO:0007264 small GTPase mediated signal transduction Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals.

50 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|gmx:100807498 1 157 + 157 Gaps:23 84.91 212 76.67 4e-90 ras-related protein RABC2a-like
blastp_kegg lcl|cic:CICLE_v10012751mg 1 157 + 157 Gaps:23 85.31 211 77.22 2e-89 hypothetical protein
blastp_kegg lcl|cit:102631338 1 157 + 157 Gaps:23 85.31 211 77.22 2e-89 ras-related protein RABC2a-like
blastp_kegg lcl|pper:PRUPE_ppa011451mg 1 157 + 157 Gaps:24 85.24 210 77.09 7e-89 hypothetical protein
blastp_kegg lcl|mdm:103416153 1 157 + 157 Gaps:23 85.31 211 75.56 2e-88 ras-related protein RABC2a-like
blastp_kegg lcl|pxb:103942403 1 157 + 157 Gaps:23 85.31 211 75.00 7e-88 ras-related protein RABC2a-like
blastp_kegg lcl|fve:101304494 1 157 + 157 Gaps:24 86.47 207 75.42 2e-87 ras-related protein RABC2a-like
blastp_kegg lcl|pmum:103339803 5 157 + 153 Gaps:23 84.62 208 76.14 3e-87 ras-related protein RABC2a
blastp_kegg lcl|brp:103850501 1 157 + 157 Gaps:24 84.43 212 74.30 4e-85 ras-related protein RABC2a-like
blastp_kegg lcl|aly:ARALYDRAFT_660194 1 157 + 157 Gaps:24 85.24 210 74.30 4e-85 hypothetical protein
blastp_pdb 1x3s_A 4 157 + 154 Gaps:26 90.26 195 47.16 5e-41 mol:protein length:195 Ras-related protein Rab-18
blastp_pdb 2rhd_A 6 150 + 145 Gaps:26 95.43 175 46.71 3e-39 mol:protein length:175 Small GTP binding protein rab1a
blastp_pdb 3cph_A 3 150 + 148 Gaps:33 79.34 213 47.34 6e-39 mol:protein length:213 Ras-related protein SEC4
blastp_pdb 3sfv_A 1 153 + 153 Gaps:26 96.69 181 43.43 2e-37 mol:protein length:181 Ras-related protein Rab-1A
blastp_pdb 3nkv_B 6 153 + 148 Gaps:26 97.14 175 43.53 1e-36 mol:protein length:175 Ras-related protein Rab-1B
blastp_pdb 3nkv_A 6 153 + 148 Gaps:26 97.14 175 43.53 1e-36 mol:protein length:175 Ras-related protein Rab-1B
blastp_pdb 3jza_A 6 153 + 148 Gaps:26 97.14 175 43.53 1e-36 mol:protein length:175 Ras-related protein Rab-1B
blastp_pdb 2fol_A 8 153 + 146 Gaps:26 87.96 191 44.64 3e-36 mol:protein length:191 Ras-related protein Rab-1A
blastp_pdb 2ocy_C 16 150 + 135 Gaps:33 91.76 170 48.08 4e-36 mol:protein length:170 Ras-related protein SEC4
blastp_pdb 3l0i_D 5 153 + 149 Gaps:26 85.93 199 43.86 4e-36 mol:protein length:199 Ras-related protein Rab-1A
blastp_uniprot_sprot sp|O49841|RAC2A_ARATH 1 157 + 157 Gaps:24 85.24 210 74.30 1e-86 Ras-related protein RABC2a OS Arabidopsis thaliana GN RABC2A PE 1 SV 1
blastp_uniprot_sprot sp|O23657|RABC1_ARATH 1 157 + 157 Gaps:24 84.43 212 66.48 7e-79 Ras-related protein RABC1 OS Arabidopsis thaliana GN RABC1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SF92|RAC2B_ARATH 1 157 + 157 Gaps:24 87.32 205 69.27 4e-73 Ras-related protein RABC2b OS Arabidopsis thaliana GN RABC2B PE 2 SV 1
blastp_uniprot_sprot sp|P36862|YPTV3_VOLCA 10 158 + 149 Gaps:24 85.22 203 47.40 2e-47 GTP-binding protein yptV3 OS Volvox carteri GN YPTV3 PE 3 SV 1
blastp_uniprot_sprot sp|Q54GY8|RAB18_DICDI 12 157 + 146 Gaps:26 83.17 202 48.81 5e-43 Ras-related protein Rab-18 OS Dictyostelium discoideum GN rab18 PE 3 SV 1
blastp_uniprot_sprot sp|Q6DHC1|RB18B_DANRE 14 157 + 144 Gaps:26 80.98 205 50.00 2e-42 Ras-related protein Rab-18-B OS Danio rerio GN rab18b PE 2 SV 1
blastp_uniprot_sprot sp|Q8MXS1|RAB18_CAEEL 5 157 + 153 Gaps:26 86.21 203 46.29 2e-40 Ras-related protein Rab-18 OS Caenorhabditis elegans GN rab-18 PE 3 SV 1
blastp_uniprot_sprot sp|Q5ZLG1|RAB18_CHICK 14 157 + 144 Gaps:26 80.58 206 48.80 5e-40 Ras-related protein Rab-18 OS Gallus gallus GN RAB18 PE 2 SV 1
blastp_uniprot_sprot sp|P40392|RIC1_ORYSJ 11 150 + 140 Gaps:26 80.20 202 50.00 2e-39 Ras-related protein RIC1 OS Oryza sativa subsp. japonica GN RIC1 PE 2 SV 2
blastp_uniprot_sprot sp|P90726|RAB18_CAEBR 5 157 + 153 Gaps:26 86.63 202 45.71 3e-39 Ras-related protein Rab-18 OS Caenorhabditis briggsae GN rab-18 PE 3 SV 1

14 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
TIGRFAM 47 148 102 TIGR00231 none small_GTP: small GTP-binding protein domain IPR005225
Gene3D 7 46 40 G3DSA:3.40.50.300 none none IPR027417
Gene3D 47 154 108 G3DSA:3.40.50.300 none none IPR027417
PANTHER 7 154 148 PTHR24073 none none none
SMART 15 156 142 SM00175 none Rab subfamily of small GTPases IPR003579
PRINTS 15 36 22 PR00449 none Transforming protein P21 ras signature IPR001806
PRINTS 131 153 23 PR00449 none Transforming protein P21 ras signature IPR001806
SUPERFAMILY 11 155 145 SSF52540 none none IPR027417
SMART 12 156 145 SM00173 none Ras subfamily of RAS small GTPases IPR020849
PANTHER 7 154 148 PTHR24073:SF285 none none none
SMART 17 157 141 SM00174 "Reactome:REACT_11044" Rho (Ras homology) subfamily of Ras-like small GTPases IPR003578
Pfam 47 153 107 PF00071 none Ras family IPR001806
Pfam 16 46 31 PF00071 none Ras family IPR001806
ProSiteProfiles 10 165 156 PS51419 none small GTPase Rab1 family profile. none

0 Localization

13 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Bourran2_2014_nEpiBC_A4 Qrob_Chr07 7 s_2FI9D9_500 s_1AXDMJ_325 12,26 0 34,9 lod 2,2306 6,1
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9
Bourran2_2002_QTL10_peak_Bud_burst_3P Qrob_Chr07 7 s_1CAWP_311 s_1BEZ9M_461 7,5 0 21,5 lod 3,7 6,3
Bourran2_2014_nPriBD*_A4 Qrob_Chr07 7 s_1A7UI0_596 s_1A3H6S_352 8,02 0 20,53 lod 4,1062 10,8
Bourran2_2014_nPriLBD*_A4 Qrob_Chr07 7 s_1C6BY7_802 s_1BPEBU_1211 7,15 0 16,34 lod 3,9419 10,2

0 Targeting