Protein : Qrob_P0119810.2 Q. robur
Protein Identifier  ? Qrob_P0119810.2 Organism . Name  Quercus robur
Score  91.1 Score Type  egn
Protein Description  (M=4) K07901 - Ras-related protein Rab-8A Gene Prediction Quality  validated
Protein length 

Sequence

Length: 221  
Kegg Orthology  K07901
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0 Synonyms

6 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0007165 signal transduction The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.
GO:0005622 intracellular The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO:0005525 GTP binding Interacting selectively and non-covalently with GTP, guanosine triphosphate.
GO:0015031 protein transport The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO:0007264 small GTPase mediated signal transduction Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals.

50 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|mtr:MTR_1g068740 4 220 + 217 Gaps:53 97.22 216 76.19 4e-104 Ras-like protein
blastp_kegg lcl|vvi:100257177 8 220 + 213 Gaps:53 95.37 216 79.13 5e-104 ras-related protein RABE1c-like
blastp_kegg lcl|brp:103855520 4 219 + 216 Gaps:53 96.31 217 77.51 6e-104 ras-related protein RABE1d
blastp_kegg lcl|atr:s00168p00045970 8 220 + 213 Gaps:53 95.37 216 79.61 6e-104 AMTR_s00168p00045970 hypothetical protein
blastp_kegg lcl|tcc:TCM_042824 4 220 + 217 Gaps:53 97.22 216 77.14 1e-103 Ras-related small GTP-binding family protein
blastp_kegg lcl|tcc:TCM_021994 8 220 + 213 Gaps:53 95.37 216 78.16 2e-103 Ras-related small GTP-binding family protein
blastp_kegg lcl|mtr:MTR_1g068730 4 220 + 217 Gaps:53 97.22 216 75.71 2e-103 Ras-like protein
blastp_kegg lcl|eus:EUTSA_v10014465mg 4 219 + 216 Gaps:54 96.30 216 78.37 3e-103 hypothetical protein
blastp_kegg lcl|crb:CARUB_v10001942mg 4 219 + 216 Gaps:54 96.30 216 78.85 3e-103 hypothetical protein
blastp_kegg lcl|sot:102605529 8 220 + 213 Gaps:53 95.37 216 77.67 8e-103 ras-related protein RABE1c-like
blastp_pdb 2fu5_D 9 185 + 177 Gaps:54 92.35 183 63.31 1e-62 mol:protein length:183 Ras-related protein Rab-8A
blastp_pdb 2fu5_C 9 185 + 177 Gaps:54 92.35 183 63.31 1e-62 mol:protein length:183 Ras-related protein Rab-8A
blastp_pdb 3tnf_A 10 185 + 176 Gaps:54 96.55 174 63.10 1e-61 mol:protein length:174 Ras-related protein Rab-8A
blastp_pdb 3qbt_G 10 185 + 176 Gaps:54 96.55 174 63.10 1e-61 mol:protein length:174 Ras-related protein Rab-8A
blastp_pdb 3qbt_E 10 185 + 176 Gaps:54 96.55 174 63.10 1e-61 mol:protein length:174 Ras-related protein Rab-8A
blastp_pdb 3qbt_C 10 185 + 176 Gaps:54 96.55 174 63.10 1e-61 mol:protein length:174 Ras-related protein Rab-8A
blastp_pdb 3qbt_A 10 185 + 176 Gaps:54 96.55 174 63.10 1e-61 mol:protein length:174 Ras-related protein Rab-8A
blastp_pdb 2fol_A 1 185 + 185 Gaps:54 92.67 191 53.11 1e-52 mol:protein length:191 Ras-related protein Rab-1A
blastp_pdb 3sfv_A 8 185 + 178 Gaps:54 93.92 181 54.71 4e-52 mol:protein length:181 Ras-related protein Rab-1A
blastp_pdb 3l0i_D 8 185 + 178 Gaps:54 85.43 199 54.71 1e-51 mol:protein length:199 Ras-related protein Rab-1A
blastp_uniprot_sprot sp|Q9LZD4|RAE1D_ARATH 4 219 + 216 Gaps:54 96.30 216 78.37 5e-104 Ras-related protein RABE1d OS Arabidopsis thaliana GN RABE1D PE 1 SV 1
blastp_uniprot_sprot sp|Q9SF91|RAE1E_ARATH 4 219 + 216 Gaps:54 96.33 218 77.14 3e-103 Ras-related protein RABE1e OS Arabidopsis thaliana GN RABE1E PE 1 SV 1
blastp_uniprot_sprot sp|P28186|RAE1C_ARATH 8 220 + 213 Gaps:53 95.37 216 76.21 2e-101 Ras-related protein RABE1c OS Arabidopsis thaliana GN RABE1C PE 1 SV 1
blastp_uniprot_sprot sp|O24466|RAE1A_ARATH 8 220 + 213 Gaps:53 95.37 216 74.27 8e-100 Ras-related protein RABE1a OS Arabidopsis thaliana GN RABE1A PE 1 SV 1
blastp_uniprot_sprot sp|Q39433|RB1BV_BETVU 8 220 + 213 Gaps:54 95.35 215 74.15 3e-94 Ras-related protein RAB1BV OS Beta vulgaris GN RAB1BV PE 2 SV 1
blastp_uniprot_sprot sp|P20790|RAB8A_DICDI 2 217 + 216 Gaps:58 98.08 208 61.27 6e-72 Ras-related protein Rab-8A OS Dictyostelium discoideum GN rab8A PE 3 SV 1
blastp_uniprot_sprot sp|P20791|RAB8B_DICDI 2 218 + 217 Gaps:64 98.03 203 62.31 1e-69 Ras-related protein Rab-8B OS Dictyostelium discoideum GN rab8B PE 2 SV 1
blastp_uniprot_sprot sp|P36861|YPTV2_VOLCA 5 218 + 214 Gaps:71 97.24 217 54.98 3e-68 GTP-binding protein yptV2 OS Volvox carteri GN YPTV2 PE 3 SV 1
blastp_uniprot_sprot sp|P17609|YPT2_SCHPO 1 199 + 199 Gaps:57 94.00 200 59.57 2e-64 GTP-binding protein ypt2 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN ypt2 PE 3 SV 1
blastp_uniprot_sprot sp|Q4R5P1|RAB8A_MACFA 9 209 + 201 Gaps:57 94.69 207 58.16 4e-63 Ras-related protein Rab-8A OS Macaca fascicularis GN RAB8A PE 2 SV 1

16 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSiteProfiles 1 218 218 PS51419 none small GTPase Rab1 family profile. none
Gene3D 24 218 195 G3DSA:3.40.50.300 none none IPR027417
PANTHER 5 126 122 PTHR24073:SF380 none none none
PRINTS 31 53 23 PR00449 none Transforming protein P21 ras signature IPR001806
PRINTS 93 106 14 PR00449 none Transforming protein P21 ras signature IPR001806
PRINTS 159 181 23 PR00449 none Transforming protein P21 ras signature IPR001806
PANTHER 157 218 62 PTHR24073 none none none
SMART 14 184 171 SM00173 none Ras subfamily of RAS small GTPases IPR020849
SMART 13 184 172 SM00175 none Rab subfamily of small GTPases IPR003579
SUPERFAMILY 156 190 35 SSF52540 none none IPR027417
SUPERFAMILY 8 125 118 SSF52540 none none IPR027417
TIGRFAM 29 132 104 TIGR00231 none small_GTP: small GTP-binding protein domain IPR005225
Pfam 24 134 111 PF00071 none Ras family IPR001806
PANTHER 5 126 122 PTHR24073 none none none
SMART 15 184 170 SM00174 "Reactome:REACT_11044" Rho (Ras homology) subfamily of Ras-like small GTPases IPR003578
PANTHER 157 218 62 PTHR24073:SF380 none none none

0 Localization

13 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Bourran2_2014_nEpiBC_A4 Qrob_Chr07 7 s_2FI9D9_500 s_1AXDMJ_325 12,26 0 34,9 lod 2,2306 6,1
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9
Bourran2_2002_QTL10_peak_Bud_burst_3P Qrob_Chr07 7 s_1CAWP_311 s_1BEZ9M_461 7,5 0 21,5 lod 3,7 6,3
Bourran2_2014_nPriBD*_A4 Qrob_Chr07 7 s_1A7UI0_596 s_1A3H6S_352 8,02 0 20,53 lod 4,1062 10,8
Bourran2_2014_nPriLBD*_A4 Qrob_Chr07 7 s_1C6BY7_802 s_1BPEBU_1211 7,15 0 16,34 lod 3,9419 10,2

0 Targeting