Protein : Qrob_P0119780.2 Q. robur
Protein Identifier  ? Qrob_P0119780.2 Organism . Name  Quercus robur
Protein Description  (M=4) PTHR19139//PTHR19139:SF52 - AQUAPORIN TRANSPORTER // SUBFAMILY NOT NAMED Alias (in v1)  Qrob_P0820690.1
Gene Prediction Quality  manual_v1 Protein length 

Sequence

Length: 252  
Kegg Orthology  K09873
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0005215 transporter activity Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells.
GO:0006810 transport The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.

42 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100233004 1 251 + 251 none 100.00 251 91.63 3e-161 TIP1 2 aquaporin-like
blastp_kegg lcl|cic:CICLE_v10012553mg 1 251 + 251 none 100.00 251 90.04 7e-160 hypothetical protein
blastp_kegg lcl|cit:102630124 1 251 + 251 none 100.00 251 90.04 7e-160 aquaporin TIP1-1-like
blastp_kegg lcl|tcc:TCM_022298 1 251 + 251 none 100.00 251 88.84 2e-157 Aquaporin TIP1 6
blastp_kegg lcl|rcu:RCOM_1353420 1 251 + 251 none 100.00 251 92.03 8e-156 tonoplast intrinsic protein putative
blastp_kegg lcl|fve:101303144 1 251 + 251 Gaps:1 99.60 253 89.29 9e-156 aquaporin TIP1-1-like
blastp_kegg lcl|eus:EUTSA_v10017134mg 1 251 + 251 none 100.00 251 88.05 3e-154 hypothetical protein
blastp_kegg lcl|pxb:103941273 1 251 + 251 Gaps:1 100.00 252 87.70 2e-153 aquaporin TIP1-1-like
blastp_kegg lcl|crb:CARUB_v10023912mg 1 251 + 251 none 100.00 251 87.65 3e-153 hypothetical protein
blastp_kegg lcl|aly:ARALYDRAFT_482663 1 251 + 251 none 100.00 251 87.25 5e-153 gamma-tip
blastp_pdb 2b6o_A 21 241 + 221 Gaps:11 82.13 263 40.28 2e-40 mol:protein length:263 Lens fiber major intrinsic protein
blastp_pdb 1sor_A 21 241 + 221 Gaps:11 91.91 235 40.28 2e-40 mol:protein length:235 Aquaporin-0
blastp_pdb 3m9i_A 21 241 + 221 Gaps:11 98.18 220 40.28 3e-40 mol:protein length:220 Lens fiber major intrinsic protein
blastp_pdb 2c32_A 21 241 + 221 Gaps:11 82.13 263 39.81 4e-40 mol:protein length:263 LENS FIBER MAJOR INTRINSIC PROTEIN
blastp_pdb 2b6p_A 21 241 + 221 Gaps:11 82.13 263 39.81 4e-40 mol:protein length:263 Lens fiber major intrinsic protein
blastp_pdb 1ymg_A 21 241 + 221 Gaps:11 82.13 263 39.81 4e-40 mol:protein length:263 Lens fiber major intrinsic protein
blastp_pdb 1ih5_A 21 244 + 224 Gaps:6 84.01 269 38.05 1e-39 mol:protein length:269 AQUAPORIN-1
blastp_pdb 1h6i_A 21 244 + 224 Gaps:6 84.01 269 38.05 1e-39 mol:protein length:269 AQUAPORIN-1
blastp_pdb 1fqy_A 21 244 + 224 Gaps:6 84.01 269 38.05 1e-39 mol:protein length:269 AQUAPORIN-1
blastp_pdb 1j4n_A 21 244 + 224 Gaps:8 84.13 271 36.40 2e-37 mol:protein length:271 AQUAPORIN 1
blastp_uniprot_sprot sp|P25818|TIP11_ARATH 1 251 + 251 none 100.00 251 86.45 1e-153 Aquaporin TIP1-1 OS Arabidopsis thaliana GN TIP1-1 PE 1 SV 1
blastp_uniprot_sprot sp|P50156|TIP11_ORYSJ 1 251 + 251 Gaps:1 100.00 250 83.60 5e-139 Probable aquaporin TIP1-1 OS Oryza sativa subsp. japonica GN TIP1-1 PE 2 SV 1
blastp_uniprot_sprot sp|Q41963|TIP12_ARATH 1 251 + 251 Gaps:2 100.00 253 80.24 5e-139 Aquaporin TIP1-2 OS Arabidopsis thaliana GN TIP1-2 PE 1 SV 2
blastp_uniprot_sprot sp|O64964|TIP11_MAIZE 1 251 + 251 Gaps:1 100.00 250 80.80 8e-134 Aquaporin TIP1-1 OS Zea mays GN TIP1-1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FY14|TIP1_MEDTR 1 251 + 251 Gaps:1 100.00 250 81.60 6e-132 Probable aquaporin TIP-type OS Medicago truncatula GN AQP1 PE 1 SV 1
blastp_uniprot_sprot sp|O82598|TIP13_ARATH 1 251 + 251 Gaps:1 100.00 252 75.00 4e-131 Aquaporin TIP1-3 OS Arabidopsis thaliana GN TIP1-3 PE 1 SV 1
blastp_uniprot_sprot sp|P42067|TIP1_MEDSA 1 251 + 251 Gaps:2 100.00 249 81.12 6e-129 Probable aquaporin TIP-type OS Medicago sativa GN MCP1 PE 2 SV 2
blastp_uniprot_sprot sp|Q94CS9|TIP12_ORYSJ 1 251 + 251 Gaps:1 100.00 252 75.79 7e-126 Probable aquaporin TIP1-2 OS Oryza sativa subsp. japonica GN TIP1-2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9ATM0|TIP12_MAIZE 1 251 + 251 Gaps:3 100.00 254 77.17 8e-126 Aquaporin TIP1-2 OS Zea mays GN TIP1-2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FGL2|TIP23_ARATH 5 250 + 246 Gaps:1 98.00 250 63.27 1e-97 Aquaporin TIP2-3 OS Arabidopsis thaliana GN TIP2-3 PE 1 SV 1

26 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 171 193 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 14 234 221 PF00230 none Major intrinsic protein IPR000425
ProSitePatterns 83 91 9 PS00221 none MIP family signature. IPR022357
Phobius 217 237 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
TIGRFAM 25 234 210 TIGR00861 none MIP: MIP family channel proteins IPR000425
Phobius 80 99 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 1 247 247 PTHR19139:SF52 none none none
Phobius 57 79 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 100 124 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 38 56 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 194 216 23 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SUPERFAMILY 13 246 234 SSF81338 none none IPR023271
Phobius 165 170 6 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 1 247 247 PTHR19139 none none IPR000425
Gene3D 14 244 231 G3DSA:1.20.1080.10 none none IPR023271
Phobius 125 143 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 238 251 14 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PRINTS 180 202 23 PR00783 none Major intrinsic protein family signature IPR000425
PRINTS 147 165 19 PR00783 none Major intrinsic protein family signature IPR000425
PRINTS 217 237 21 PR00783 none Major intrinsic protein family signature IPR000425
PRINTS 21 40 20 PR00783 none Major intrinsic protein family signature IPR000425
PRINTS 102 121 20 PR00783 none Major intrinsic protein family signature IPR000425
PRINTS 65 89 25 PR00783 none Major intrinsic protein family signature IPR000425
Phobius 20 37 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 19 19 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 144 164 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none

6 Localization

Analysis Start End Length
TMHMM 217 239 22
TMHMM 142 164 22
TMHMM 59 81 22
TMHMM 171 193 22
TMHMM 88 110 22
TMHMM 22 44 22

13 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Bourran2_2014_nEpiBC_A4 Qrob_Chr07 7 s_2FI9D9_500 s_1AXDMJ_325 12,26 0 34,9 lod 2,2306 6,1
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9
Bourran2_2002_QTL10_peak_Bud_burst_3P Qrob_Chr07 7 s_1CAWP_311 s_1BEZ9M_461 7,5 0 21,5 lod 3,7 6,3
Bourran2_2014_nPriBD*_A4 Qrob_Chr07 7 s_1A7UI0_596 s_1A3H6S_352 8,02 0 20,53 lod 4,1062 10,8
Bourran2_2014_nPriLBD*_A4 Qrob_Chr07 7 s_1C6BY7_802 s_1BPEBU_1211 7,15 0 16,34 lod 3,9419 10,2

0 Targeting